| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928360
Identifier: 187928360
GI number: 187928360
Start: 1362286
End: 1363500
Strand: Direct
Name: 187928360
Synonym: Rpic_1271
Alternate gene names: NA
Gene position: 1362286-1363500 (Clockwise)
Preceding gene: 187928359
Following gene: 187928361
Centisome position: 34.55
GC content: 66.34
Gene sequence:
>1215_bases ATGCAGGACAACAACCTGGTGATGGCCCTGCTGGGCGCCGGCGTGGTGTTTGTGCTGGTGATCGTTGTGTACAACCAGTG GCAGATCCGCAAGGCGCGAGGCCCCGAGGCGTACAACCCGCCCGTCGACGAGACACCGCGCGGCGACGGTTGGACCGAGC GCGCCGAACCGGCCCTCGGTGGCGAGCGCGACGAAATCAACCGCGTCGAACCGCGTCTCGAGCCCGGTTTCTCGGCGAAG ACGCACACGCCCGCCACGGGCAGCGCCGAAACCGAAGCCGGCGTGATTGGCGCCGAACTCACACCCTCGGGCGACGATGC CGCGCTCGAAGCCGCCGAGGCCGGAGAGATTGCCGAACCCGCCCCGGGTTCGCTGGAGCCGGCCAATGGCGTGATCGATC CGCTGATCGACTGCATCGTGCCGCTGCACCCGGATCGAGAAGTGTCGGGCGACCGTCTGCTGCCGTCGCTCGCCAAGCTG CGCCGCGCAGGCACCAAGCAGATCCACGTGGAAGGCTTGAACCCCGCCGCCAATGCGTGGGAAGCCATCCGCGCCGGGCA GCGCTACCTGGACGTGCAGGTGGCCGTGCAACTGGCCAATCGCACGGGCCCGCTGAATGCGCTGGAGTTCTCGGAATTCA TCAACGCGATCGATCCGCTGTCGGAGGCGGCAGATGCCGTGCCGGAACTGCCGGACATGAACGAGACGATTTCCAACGCG CGCGAACTCGACGCGTTTGCCGCCGAGTGCGATGTGCAATTGGGCGTGAGCGTGATCTCCGACGGCGCCCCATGGTCGGC AGCATACGTGCAGACGGTGGCCACGCAAGACGGCCTCGTGCTCTCGCGTGACGGCACGCGCTTCACGCGCTTCCATGCGG GGGGCGACGGTGTGCAGCGCGCACTGTTCACGCTGCAGTTTGGCGACACCAATTTCCTGCGCGATGACCTGACCATCAAG GCCGGCCGACAGATCACGCTGTTGCTCGATGTGCCGGTGGCGGAAGAGTCGAGCAAGCCGTTCAAGCTGGTGTGCGAATA CGCCTACACGCTGTCGCAGCGCATGGGTGCGCAGGTCGTGGATGACAACCTGCGTCCGCTGACGGAGCAATCGTTCGTCG CCATCCAGAAGCATCTGCGGGTGCTGTATGACAAGCTCGAATCGCGCGGCATCCCGGCCGGTTCCAGCACCGCGGTGCGC CTGTTCAGCCACTGA
Upstream 100 bases:
>100_bases GGCGCAACAGCTCATCGGTGTGACCATGCAGGAACAAGGTGTGTCCCGGATCGTGGCGGTGGATATGGATGCCGCGCTGA CCATGGCGGAGGCTGCATAA
Downstream 100 bases:
>100_bases CGGACGCACGATGAGCAAGACTGAAGAACCCGCGTCCGGACCGCCCTCAAAAGACCGGCCCGAGGCGCGGGCAGCCTGGC TGCGCGCCGAGCTGAACCGC
Product: FtsZ-binding protein ZipA
Products: NA
Alternate protein names: Protein ZipA; Transmembrane Protein; ZipA Related Protein Possibly Involved In; Chromosome Segregation Protein Smc
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MQDNNLVMALLGAGVVFVLVIVVYNQWQIRKARGPEAYNPPVDETPRGDGWTERAEPALGGERDEINRVEPRLEPGFSAK THTPATGSAETEAGVIGAELTPSGDDAALEAAEAGEIAEPAPGSLEPANGVIDPLIDCIVPLHPDREVSGDRLLPSLAKL RRAGTKQIHVEGLNPAANAWEAIRAGQRYLDVQVAVQLANRTGPLNALEFSEFINAIDPLSEAADAVPELPDMNETISNA RELDAFAAECDVQLGVSVISDGAPWSAAYVQTVATQDGLVLSRDGTRFTRFHAGGDGVQRALFTLQFGDTNFLRDDLTIK AGRQITLLLDVPVAEESSKPFKLVCEYAYTLSQRMGAQVVDDNLRPLTEQSFVAIQKHLRVLYDKLESRGIPAGSSTAVR LFSH
Sequences:
>Translated_404_residues MQDNNLVMALLGAGVVFVLVIVVYNQWQIRKARGPEAYNPPVDETPRGDGWTERAEPALGGERDEINRVEPRLEPGFSAK THTPATGSAETEAGVIGAELTPSGDDAALEAAEAGEIAEPAPGSLEPANGVIDPLIDCIVPLHPDREVSGDRLLPSLAKL RRAGTKQIHVEGLNPAANAWEAIRAGQRYLDVQVAVQLANRTGPLNALEFSEFINAIDPLSEAADAVPELPDMNETISNA RELDAFAAECDVQLGVSVISDGAPWSAAYVQTVATQDGLVLSRDGTRFTRFHAGGDGVQRALFTLQFGDTNFLRDDLTIK AGRQITLLLDVPVAEESSKPFKLVCEYAYTLSQRMGAQVVDDNLRPLTEQSFVAIQKHLRVLYDKLESRGIPAGSSTAVR LFSH >Mature_404_residues MQDNNLVMALLGAGVVFVLVIVVYNQWQIRKARGPEAYNPPVDETPRGDGWTERAEPALGGERDEINRVEPRLEPGFSAK THTPATGSAETEAGVIGAELTPSGDDAALEAAEAGEIAEPAPGSLEPANGVIDPLIDCIVPLHPDREVSGDRLLPSLAKL RRAGTKQIHVEGLNPAANAWEAIRAGQRYLDVQVAVQLANRTGPLNALEFSEFINAIDPLSEAADAVPELPDMNETISNA RELDAFAAECDVQLGVSVISDGAPWSAAYVQTVATQDGLVLSRDGTRFTRFHAGGDGVQRALFTLQFGDTNFLRDDLTIK AGRQITLLLDVPVAEESSKPFKLVCEYAYTLSQRMGAQVVDDNLRPLTEQSFVAIQKHLRVLYDKLESRGIPAGSSTAVR LFSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43494; Mature: 43494
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDNNLVMALLGAGVVFVLVIVVYNQWQIRKARGPEAYNPPVDETPRGDGWTERAEPALG CCCCCEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC GERDEINRVEPRLEPGFSAKTHTPATGSAETEAGVIGAELTPSGDDAALEAAEAGEIAEP CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCC APGSLEPANGVIDPLIDCIVPLHPDREVSGDRLLPSLAKLRRAGTKQIHVEGLNPAANAW CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHH EAIRAGQRYLDVQVAVQLANRTGPLNALEFSEFINAIDPLSEAADAVPELPDMNETISNA HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH RELDAFAAECDVQLGVSVISDGAPWSAAYVQTVATQDGLVLSRDGTRFTRFHAGGDGVQR HHHHHHHHHCCHHCCCEEECCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHEE ALFTLQFGDTNFLRDDLTIKAGRQITLLLDVPVAEESSKPFKLVCEYAYTLSQRMGAQVV EEEEEEECCCCEECCCCEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHH DDNLRPLTEQSFVAIQKHLRVLYDKLESRGIPAGSSTAVRLFSH CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC >Mature Secondary Structure MQDNNLVMALLGAGVVFVLVIVVYNQWQIRKARGPEAYNPPVDETPRGDGWTERAEPALG CCCCCEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC GERDEINRVEPRLEPGFSAKTHTPATGSAETEAGVIGAELTPSGDDAALEAAEAGEIAEP CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCC APGSLEPANGVIDPLIDCIVPLHPDREVSGDRLLPSLAKLRRAGTKQIHVEGLNPAANAW CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHH EAIRAGQRYLDVQVAVQLANRTGPLNALEFSEFINAIDPLSEAADAVPELPDMNETISNA HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH RELDAFAAECDVQLGVSVISDGAPWSAAYVQTVATQDGLVLSRDGTRFTRFHAGGDGVQR HHHHHHHHHCCHHCCCEEECCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHEE ALFTLQFGDTNFLRDDLTIKAGRQITLLLDVPVAEESSKPFKLVCEYAYTLSQRMGAQVV EEEEEEECCCCEECCCCEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHH DDNLRPLTEQSFVAIQKHLRVLYDKLESRGIPAGSSTAVRLFSH CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA