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The map label for this gene is ycdJ [C]

Identifier: 187928358

GI number: 187928358

Start: 1357473

End: 1358519

Strand: Direct

Name: ycdJ [C]

Synonym: Rpic_1269

Alternate gene names: 187928358

Gene position: 1357473-1358519 (Clockwise)

Preceding gene: 187928357

Following gene: 187928359

Centisome position: 34.43

GC content: 65.43

Gene sequence:

>1047_bases
ATGTGGCTTCGTTCGATTTTCATCGCGCTGACGTTTGCGCTCTCGACGTTCGCAACGGCCCCGCACGCCGCTTCCGCAGA
GACAGGCCCCGCGTATGGCCCGCGCCTGGAAGGCTTCGATTACCCGGCGCCGGTCAAGCTCTTCAAGTTCGAGTCGCAGG
GCAACGCGCTGGAGATGGCGTATCTGGACGTCGCGCCCAAGCAGCCCAACGGCCAGGTGGCGGTGCTGCTGCACGGCAAG
AACTTCTGCGCGGCCACCTGGGAAGGCACGATCGCCGCACTGACCGGTGCCGGCTACCGCGTGATCGCCCCGGATCAGAT
CGGCTTCTGCAAATCGAGCAAGCCGCGCGCGTATCAGTACACGTTCCAGCAACTGGCGAGCAATACGCATGCGCTGCTGG
CGTCGCTTGGGATCGGGCAGGCCATCCTGATCGGCCATTCGACGGGCGGCATGCTGGCGGCGCGTTACGCGCTGATGTAT
CCGAACGCGGTGTCGCGGCTGGTGATGATCAACCCGATCGGCCTGGAAGACTGGAAGGCCGAGGGCGTGCCGTCCATGAC
GGTCGACCAGTGGTTCGCGCGTGAAAAGCAAACCACCGCCGAGCGCATCCGTGCCTATGAGCAGTCCACGTACTACGCCG
GGCAATGGCGCGCGCAATACGAACCGTGGGTGCAGATGCTGGCCGGCATGTACCGCGGCCCGGGGCGCGATCTGGTGGCG
TGGAATTCCGCGCTGCTGTACGACATGATCTATACGCAGCCTGTCGTCTATGAGTTTGGCCAGTTGCGCCCGTGGACGCT
GCTGCTCATCGGTCAGAAAGACACCACCGCCATCGGCAAGGACGCCGCACCGCCGGAAGCGCGGGCACAGCTGGGGCATT
ACCCCGAACTTGGCCGTGCAGCCGCCAAGGCTATCCCGCGCGCGACGTTGGTGGAATTCCCGGATGCGGGCCATGCGCCA
CAAATCCAGGATCCTGATGCGCTGCACCATGCGCTGCTCGGATGGCTGGCCACGGCGGAGCCTTCGCGCACACGCCGGCC
GGACTGA

Upstream 100 bases:

>100_bases
ATGCTGGGCGGCGCCTGCATCATCCTGGCAGGTGCGCTGTCGGGGCTGTTGCGGCGCAGGTAGGCCGCCGGTGTTTCGCA
AACCAACCAAGGAGTTGCCG

Downstream 100 bases:

>100_bases
CGCCGTTTGTCATGAAGGTGAAACTGCTTACAAATCCGCAGCAATTTCGCCTCCCGCGCTGCAAATTTCGTCCATTTTTG
TAGCGATTTGATTGGCGGGA

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MWLRSIFIALTFALSTFATAPHAASAETGPAYGPRLEGFDYPAPVKLFKFESQGNALEMAYLDVAPKQPNGQVAVLLHGK
NFCAATWEGTIAALTGAGYRVIAPDQIGFCKSSKPRAYQYTFQQLASNTHALLASLGIGQAILIGHSTGGMLAARYALMY
PNAVSRLVMINPIGLEDWKAEGVPSMTVDQWFAREKQTTAERIRAYEQSTYYAGQWRAQYEPWVQMLAGMYRGPGRDLVA
WNSALLYDMIYTQPVVYEFGQLRPWTLLLIGQKDTTAIGKDAAPPEARAQLGHYPELGRAAAKAIPRATLVEFPDAGHAP
QIQDPDALHHALLGWLATAEPSRTRRPD

Sequences:

>Translated_348_residues
MWLRSIFIALTFALSTFATAPHAASAETGPAYGPRLEGFDYPAPVKLFKFESQGNALEMAYLDVAPKQPNGQVAVLLHGK
NFCAATWEGTIAALTGAGYRVIAPDQIGFCKSSKPRAYQYTFQQLASNTHALLASLGIGQAILIGHSTGGMLAARYALMY
PNAVSRLVMINPIGLEDWKAEGVPSMTVDQWFAREKQTTAERIRAYEQSTYYAGQWRAQYEPWVQMLAGMYRGPGRDLVA
WNSALLYDMIYTQPVVYEFGQLRPWTLLLIGQKDTTAIGKDAAPPEARAQLGHYPELGRAAAKAIPRATLVEFPDAGHAP
QIQDPDALHHALLGWLATAEPSRTRRPD
>Mature_348_residues
MWLRSIFIALTFALSTFATAPHAASAETGPAYGPRLEGFDYPAPVKLFKFESQGNALEMAYLDVAPKQPNGQVAVLLHGK
NFCAATWEGTIAALTGAGYRVIAPDQIGFCKSSKPRAYQYTFQQLASNTHALLASLGIGQAILIGHSTGGMLAARYALMY
PNAVSRLVMINPIGLEDWKAEGVPSMTVDQWFAREKQTTAERIRAYEQSTYYAGQWRAQYEPWVQMLAGMYRGPGRDLVA
WNSALLYDMIYTQPVVYEFGQLRPWTLLLIGQKDTTAIGKDAAPPEARAQLGHYPELGRAAAKAIPRATLVEFPDAGHAP
QIQDPDALHHALLGWLATAEPSRTRRPD

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI27597073, Length=103, Percent_Identity=37.8640776699029, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 38200; Mature: 38200

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLRSIFIALTFALSTFATAPHAASAETGPAYGPRLEGFDYPAPVKLFKFESQGNALEMA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEE
YLDVAPKQPNGQVAVLLHGKNFCAATWEGTIAALTGAGYRVIAPDQIGFCKSSKPRAYQY
EEECCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCEEEECCCCCCCCCCCCCCHHHH
TFQQLASNTHALLASLGIGQAILIGHSTGGMLAARYALMYPNAVSRLVMINPIGLEDWKA
HHHHHHCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHHCEEEEECCCCCCCCCC
EGVPSMTVDQWFAREKQTTAERIRAYEQSTYYAGQWRAQYEPWVQMLAGMYRGPGRDLVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHCCCCCCEEE
WNSALLYDMIYTQPVVYEFGQLRPWTLLLIGQKDTTAIGKDAAPPEARAQLGHYPELGRA
HHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCHHHHH
AAKAIPRATLVEFPDAGHAPQIQDPDALHHALLGWLATAEPSRTRRPD
HHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MWLRSIFIALTFALSTFATAPHAASAETGPAYGPRLEGFDYPAPVKLFKFESQGNALEMA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEE
YLDVAPKQPNGQVAVLLHGKNFCAATWEGTIAALTGAGYRVIAPDQIGFCKSSKPRAYQY
EEECCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCEEEECCCCCCCCCCCCCCHHHH
TFQQLASNTHALLASLGIGQAILIGHSTGGMLAARYALMYPNAVSRLVMINPIGLEDWKA
HHHHHHCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHHCEEEEECCCCCCCCCC
EGVPSMTVDQWFAREKQTTAERIRAYEQSTYYAGQWRAQYEPWVQMLAGMYRGPGRDLVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHCCCCCCEEE
WNSALLYDMIYTQPVVYEFGQLRPWTLLLIGQKDTTAIGKDAAPPEARAQLGHYPELGRA
HHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCHHHHH
AAKAIPRATLVEFPDAGHAPQIQDPDALHHALLGWLATAEPSRTRRPD
HHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]