Click here to switch to the map view.

The map label for this gene is ssuA [H]

Identifier: 187928302

GI number: 187928302

Start: 1302524

End: 1303516

Strand: Direct

Name: ssuA [H]

Synonym: Rpic_1213

Alternate gene names: 187928302

Gene position: 1302524-1303516 (Clockwise)

Preceding gene: 187928301

Following gene: 187928303

Centisome position: 33.04

GC content: 65.16

Gene sequence:

>993_bases
ATGAAAACCCACTCGCCCCTGCGCAGGACTTTGACCATTGCCGCCACGTTGCTTGCAACGCTTGGCGTGCCCGCCGCATT
TGCCAATAGCGATGCGCCGCCCCCGACCGCAGCCAAACAACTGCGCATCGGCTATCAGAAATACGGCACGCTGACGGTGC
TCAAGGCACGCGGCACGTTGGAAAAGCGCCTTGCCGCTCAGGGCATCGAAGTGAAGTGGACCGAGTTTCCGGCAGGCCCG
CAGTTGCTGGAAGGCCTGAACGTGGGCGCCATCGATTTCGGCACCACGGGTGAAGCACCGACAATCTTCGCGCTGGCTGC
CGGGGCGCACCTCGTCTATGTCGGCAACCAGCCGCCCGCGCCGGCCGGCGAGGCGATCATCGTGCCGAAGACGTCGCCGC
TCAAGAGCGTGGCCGATCTCAAGGGCAAGCGCGTTGCCTTCAACAAGGGCTCGAACGTGCATTACCTGCTGGTGAAGCTG
CTGGAAAAGGCCAATGTGCCCTACAGCGATATCCAGCCCGTATACCTGACCCCCGCCGATGCGCGTGCCGCCTTCGAGCG
CGGCGCCATCGACGCCTGGGTGATCTGGGATCCGTTCTTTGCCGCGGCCGAACAGCAGCTGGGCGCGCGCGTGCTGGCCG
ATGGCACGGGCGTGGTCAACAACTCGCAGTACTTCCTGGCATCGAAGGGCTATGCAGGCGCGCGGCCCGATGTGCTGAAC
ATCGTGCTCGATGAGCTGAAGAAGACCGACACCTGGGCCGCTGCCAACCCGAAGGATGTGACAAACATTCTTGGCCCGCA
GCTCGGCCTGGAGCCGGCCGTGGTGGCGCGTTCGGTGTCGCGCATTGCCTATGGCATCCAGCCCGTCGGGCCCGAGGCCC
TGGCTGACCAGCAGCGCATTGCCGATACGTTCCACACGCTCAAGCTGATCCCGCGCCCCGTCAAGGTGGCCGACTCTGCG
TGGCAGCCGACGACGCAGCAAGCCGCGCGCTGA

Upstream 100 bases:

>100_bases
CGTATACACACGCTCTCTGGATTTTTCCGTTGTTGTCACGCCGCGCGGCTGCCGCGCGCGAATCGTGTCGCCCATACACC
CCGCATCGATCGAACTTGCC

Downstream 100 bases:

>100_bases
TCGCCATGATCGTCAACATCCAACGCCGCCGCCTGTTGAGCGCCACCGTGGCGGGCGCATCGCTGGCCACGCTCGGGCCG
GTCGCACACGCCGCTAATGC

Product: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKTHSPLRRTLTIAATLLATLGVPAAFANSDAPPPTAAKQLRIGYQKYGTLTVLKARGTLEKRLAAQGIEVKWTEFPAGP
QLLEGLNVGAIDFGTTGEAPTIFALAAGAHLVYVGNQPPAPAGEAIIVPKTSPLKSVADLKGKRVAFNKGSNVHYLLVKL
LEKANVPYSDIQPVYLTPADARAAFERGAIDAWVIWDPFFAAAEQQLGARVLADGTGVVNNSQYFLASKGYAGARPDVLN
IVLDELKKTDTWAAANPKDVTNILGPQLGLEPAVVARSVSRIAYGIQPVGPEALADQQRIADTFHTLKLIPRPVKVADSA
WQPTTQQAAR

Sequences:

>Translated_330_residues
MKTHSPLRRTLTIAATLLATLGVPAAFANSDAPPPTAAKQLRIGYQKYGTLTVLKARGTLEKRLAAQGIEVKWTEFPAGP
QLLEGLNVGAIDFGTTGEAPTIFALAAGAHLVYVGNQPPAPAGEAIIVPKTSPLKSVADLKGKRVAFNKGSNVHYLLVKL
LEKANVPYSDIQPVYLTPADARAAFERGAIDAWVIWDPFFAAAEQQLGARVLADGTGVVNNSQYFLASKGYAGARPDVLN
IVLDELKKTDTWAAANPKDVTNILGPQLGLEPAVVARSVSRIAYGIQPVGPEALADQQRIADTFHTLKLIPRPVKVADSA
WQPTTQQAAR
>Mature_330_residues
MKTHSPLRRTLTIAATLLATLGVPAAFANSDAPPPTAAKQLRIGYQKYGTLTVLKARGTLEKRLAAQGIEVKWTEFPAGP
QLLEGLNVGAIDFGTTGEAPTIFALAAGAHLVYVGNQPPAPAGEAIIVPKTSPLKSVADLKGKRVAFNKGSNVHYLLVKL
LEKANVPYSDIQPVYLTPADARAAFERGAIDAWVIWDPFFAAAEQQLGARVLADGTGVVNNSQYFLASKGYAGARPDVLN
IVLDELKKTDTWAAANPKDVTNILGPQLGLEPAVVARSVSRIAYGIQPVGPEALADQQRIADTFHTLKLIPRPVKVADSA
WQPTTQQAAR

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=320, Percent_Identity=45, Blast_Score=254, Evalue=6e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 35095; Mature: 35095

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTHSPLRRTLTIAATLLATLGVPAAFANSDAPPPTAAKQLRIGYQKYGTLTVLKARGTL
CCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCH
EKRLAAQGIEVKWTEFPAGPQLLEGLNVGAIDFGTTGEAPTIFALAAGAHLVYVGNQPPA
HHHHHHCCCEEEEECCCCCHHHHHCCCCCEEECCCCCCCCEEEEEECCCEEEEECCCCCC
PAGEAIIVPKTSPLKSVADLKGKRVAFNKGSNVHYLLVKLLEKANVPYSDIQPVYLTPAD
CCCCEEEEECCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHCCEEEECCCH
ARAAFERGAIDAWVIWDPFFAAAEQQLGARVLADGTGVVNNSQYFLASKGYAGARPDVLN
HHHHHHCCCCEEEEEECHHHHHHHHHHCCEEEECCCCEEECCEEEEEECCCCCCCCHHHH
IVLDELKKTDTWAAANPKDVTNILGPQLGLEPAVVARSVSRIAYGIQPVGPEALADQQRI
HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ADTFHTLKLIPRPVKVADSAWQPTTQQAAR
HHHHHHHHHCCCCHHHCCCCCCCCHHHHCC
>Mature Secondary Structure
MKTHSPLRRTLTIAATLLATLGVPAAFANSDAPPPTAAKQLRIGYQKYGTLTVLKARGTL
CCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCH
EKRLAAQGIEVKWTEFPAGPQLLEGLNVGAIDFGTTGEAPTIFALAAGAHLVYVGNQPPA
HHHHHHCCCEEEEECCCCCHHHHHCCCCCEEECCCCCCCCEEEEEECCCEEEEECCCCCC
PAGEAIIVPKTSPLKSVADLKGKRVAFNKGSNVHYLLVKLLEKANVPYSDIQPVYLTPAD
CCCCEEEEECCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHCCEEEECCCH
ARAAFERGAIDAWVIWDPFFAAAEQQLGARVLADGTGVVNNSQYFLASKGYAGARPDVLN
HHHHHHCCCCEEEEEECHHHHHHHHHHCCEEEECCCCEEECCEEEEEECCCCCCCCHHHH
IVLDELKKTDTWAAANPKDVTNILGPQLGLEPAVVARSVSRIAYGIQPVGPEALADQQRI
HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ADTFHTLKLIPRPVKVADSAWQPTTQQAAR
HHHHHHHHHCCCCHHHCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]