| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is fabG [C]
Identifier: 187928229
GI number: 187928229
Start: 1214218
End: 1215009
Strand: Reverse
Name: fabG [C]
Synonym: Rpic_1138
Alternate gene names: 187928229
Gene position: 1215009-1214218 (Counterclockwise)
Preceding gene: 187928230
Following gene: 187928228
Centisome position: 30.82
GC content: 59.85
Gene sequence:
>792_bases ATGAACTCACCAAATACGCCTGTGCCTGCAACTGCGACGAGCAGCGGTTTGCACGGAAAGGTCGCGATGATTGTTGGAGC AAGCCGCGGCTTGGGCAAAGGCATCGCCAAAGCGTTTGCCGACGCGGGTAGCAAGGTAGTGGTTGTGTCCCGCACCCCAG TGCCTGCAGGTGAGCTGGAAGATGGCGCTACACATGCTGAGATTGCGGATGCCCGCACTGATACAACTGCCGCCACGCTG CTGACAAAGCATGATCCCGATATCCTGGTCCTAGCCGCCGGTGCCACTCCAGTTATGAGGACAATCCGGGAGCAGTCTTG GGAGACGTTCTCTCTCAACTGGGACACCGATGTGAAAATGGCTTTCCATTGGTTGCAGGCAGTCCTGTCGAAGCCGCTAA AGCCAGGAGCGCGCGTAGTCGTGATCAGCAGCGGCGCAGCGATCTCCGGCTCACCGCTAAGCGGGGGCTACGCCGGCGCC AAGGCAACTCAGCGCTTCATCGCACAGTATGCGCAGGATGAGGCATTGCGAGCCGGATTGGACATTGCAATCTCGACAGT GATGCCGCGTTTCGCGCCAACAACTGGCGTTGGTGCACCTGCGGTTCGCGCTTACGCCGAGCATGCCCGGGTCGACGTCG ATGAATTCCTCCAGACGTTTCAGCGCTCCTTCGGAGCACTCGTCACGCCCGAGACTGCCGGCCATGCAATAGTCGGCCTA GCCAGTACTCGAACTTCGGAGGTTGCGCCTGCCTACTTACTGACGGGAGACGGCTTACAGAAGCTGGCCTGA
Upstream 100 bases:
>100_bases CAAGGGCGTGTCGCCGCGCGTCCTGCAGTCGCTGCAGCAATGCGCGCTCAAGGTCTGATCGACGCGTGACGCCTTAATAC TTCTGGTCAAAGAGGACTCC
Downstream 100 bases:
>100_bases CGGTGCGAAGCAATAGGCGTAAGACCTCGGGAATGTGCCGGCACCATGGAGGGCGCTGGGCAACTTCTAGTTTGTTGAAT CTAAGCGGCCAGTTCACGGC
Product: short-chain dehydrogenase/reductase SDR
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: Short-Chain Dehydrogenase; Dehydrogenase/Oxidoreductase; Short-Chain Dehydrogenase Protein; 3-Oxoacyl-(Acyl-Carrier Protein) Reductase
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MNSPNTPVPATATSSGLHGKVAMIVGASRGLGKGIAKAFADAGSKVVVVSRTPVPAGELEDGATHAEIADARTDTTAATL LTKHDPDILVLAAGATPVMRTIREQSWETFSLNWDTDVKMAFHWLQAVLSKPLKPGARVVVISSGAAISGSPLSGGYAGA KATQRFIAQYAQDEALRAGLDIAISTVMPRFAPTTGVGAPAVRAYAEHARVDVDEFLQTFQRSFGALVTPETAGHAIVGL ASTRTSEVAPAYLLTGDGLQKLA
Sequences:
>Translated_263_residues MNSPNTPVPATATSSGLHGKVAMIVGASRGLGKGIAKAFADAGSKVVVVSRTPVPAGELEDGATHAEIADARTDTTAATL LTKHDPDILVLAAGATPVMRTIREQSWETFSLNWDTDVKMAFHWLQAVLSKPLKPGARVVVISSGAAISGSPLSGGYAGA KATQRFIAQYAQDEALRAGLDIAISTVMPRFAPTTGVGAPAVRAYAEHARVDVDEFLQTFQRSFGALVTPETAGHAIVGL ASTRTSEVAPAYLLTGDGLQKLA >Mature_263_residues MNSPNTPVPATATSSGLHGKVAMIVGASRGLGKGIAKAFADAGSKVVVVSRTPVPAGELEDGATHAEIADARTDTTAATL LTKHDPDILVLAAGATPVMRTIREQSWETFSLNWDTDVKMAFHWLQAVLSKPLKPGARVVVISSGAAISGSPLSGGYAGA KATQRFIAQYAQDEALRAGLDIAISTVMPRFAPTTGVGAPAVRAYAEHARVDVDEFLQTFQRSFGALVTPETAGHAIVGL ASTRTSEVAPAYLLTGDGLQKLA
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 27201; Mature: 27201
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPNTPVPATATSSGLHGKVAMIVGASRGLGKGIAKAFADAGSKVVVVSRTPVPAGELE CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCC DGATHAEIADARTDTTAATLLTKHDPDILVLAAGATPVMRTIREQSWETFSLNWDTDVKM CCCCHHHHHHCCCCCHHHEEEECCCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHH AFHWLQAVLSKPLKPGARVVVISSGAAISGSPLSGGYAGAKATQRFIAQYAQDEALRAGL HHHHHHHHHHCCCCCCCEEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCH DIAISTVMPRFAPTTGVGAPAVRAYAEHARVDVDEFLQTFQRSFGALVTPETAGHAIVGL HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCEEEEE ASTRTSEVAPAYLLTGDGLQKLA CCCCCCCCCCEEEEECCCHHHCC >Mature Secondary Structure MNSPNTPVPATATSSGLHGKVAMIVGASRGLGKGIAKAFADAGSKVVVVSRTPVPAGELE CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCC DGATHAEIADARTDTTAATLLTKHDPDILVLAAGATPVMRTIREQSWETFSLNWDTDVKM CCCCHHHHHHCCCCCHHHEEEECCCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHH AFHWLQAVLSKPLKPGARVVVISSGAAISGSPLSGGYAGAKATQRFIAQYAQDEALRAGL HHHHHHHHHHCCCCCCCEEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCH DIAISTVMPRFAPTTGVGAPAVRAYAEHARVDVDEFLQTFQRSFGALVTPETAGHAIVGL HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCEEEEE ASTRTSEVAPAYLLTGDGLQKLA CCCCCCCCCCEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA