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The map label for this gene is fixN [H]

Identifier: 187928197

GI number: 187928197

Start: 1179914

End: 1181371

Strand: Direct

Name: fixN [H]

Synonym: Rpic_1104

Alternate gene names: 187928197

Gene position: 1179914-1181371 (Clockwise)

Preceding gene: 187928196

Following gene: 187928198

Centisome position: 29.93

GC content: 60.84

Gene sequence:

>1458_bases
ATGGAATCATCCAGCGCGTTGCAGCACACCCAGACCTTCAACTATCGCGTGGTACGCCAGTTCTCGATCATGACGATCGT
CTGGGGCATCGTCGGTATGGCGGTCGGTGCGCTGATCGCGGCCCAGTTGATCTGGCCGCAACTGAATTTCGGGGTGCCCT
GGCTGTCCTACGGCCGGCTGCGTCCTCTGCACACGAATGCCGTCATCTTTGCGTTTGGCGGCAGCGCGCTGTTTGCGACG
TCCTACTACATCGTGCAGCGTACCTGCCAGGTGCGCCTGCTTTCCGACAAGCTTGCCGCCTTCACGTTCTGGGGCTGGCA
GGCAGTGATCGTGGCTGCCGCCATCACCCTGCCGCTGGGCTACACAAGCTCGAAGGAATACGCTGAGCTGGAATGGCCGA
TCGACATCCTGATCACCGTGGTGTGGGTGGTCTACGCGATCGTCTTCTTCGGCACCATCATCAAGCGCAAGACCCGGCAC
ATCTACGTGGCCAACTGGTTCTTCGGCGCTTACATCATCACGATCGCGCTGCTGCATATCGTCAACAACGCTGAGTTGCC
CGTGTCGATGTGGAAGTCGTACTCGGCTTATGCCGGCGTGCAGGATGCGATGGTGCAATGGTGGTATGGGCACAACGCTG
TGGGCTTCTTCCTGACCACCAGCTTCCTGGGCATGATGTATTACTTCGTGCCGAAGCAGGCCGAGCGCCCGATCTATTCG
TATCGCCTGTCGATCGTGCACTTCTGGGCGCTGAACTTCACCTACATGTGGGCGGGTCCGCACCACCTGCAGTACACGGC
GCTGCCCGACTGGGCCCAGTCGCTCGGCATGGTGTTTTCGCTGATCCTGCTGGCGCCGTCGTGGGGCGGCATGATCAACG
GGATCATGACCCTGTCGGGTGCCTGGCACAAGCTGCGCACCGATCCGATCCTGAAGTTCCTGGTCGTGGCGCTGTCGTTC
TATGGCATGGCGACGTTCGAGGGCTCGATGATGTCCATCAAGACCGTGAATGCGCTGTCGCACTACACCGACTGGACAAT
CGGCCACGTGCACTCCGGCGCCCTGGGCTGGGTGGCGATGATCACTATCGGTTCGATGTACTACATGATCCCGCGCCTGT
TCGGCCAGCAGAAGATGTACAGCACGCGCCTGATCGAGGTGCACTTCTGGGTGGCGACCATCGGCGTTGTCCTCTATATC
GCCGCCATGTGGGTCGCCGGCGTGATGCAGGGCCTGATGTGGCGCGCCACCGAGGCTGACGGCACGCTGACCTACAGCTT
TGTCGAGGCGGTCAAGGCAACGTACCCGTTCTACCTGATTCGCTTGGCTGGTGGCCTGTGCTTCCTGGGCGGCATGCTGC
TGATGGCATTCAACGTGTTCAAGACCATCCAGGGCAGCAAGGCGATCGATGCACCGATTCCTCAATCGGCCCAGACCCCG
ATGGTCGCGGCTCAGTGA

Upstream 100 bases:

>100_bases
CCTGACCACATTGCCGGGGTTGCCTTGATGCACGTCAAGACTCTTTGGCGGCCCGGTTCTTAACATGACCACATCACACC
AATTATCGTGGGGAGCAAGC

Downstream 100 bases:

>100_bases
GGAGGGGAACATGAGCAACCAATCCAACAAGTTTTTCTCGCACGAGACGCTGGAAAAGAACATCGGCTTGCTGATTGTGA
TGACGCTCGTCGTCGTCAGC

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MESSSALQHTQTFNYRVVRQFSIMTIVWGIVGMAVGALIAAQLIWPQLNFGVPWLSYGRLRPLHTNAVIFAFGGSALFAT
SYYIVQRTCQVRLLSDKLAAFTFWGWQAVIVAAAITLPLGYTSSKEYAELEWPIDILITVVWVVYAIVFFGTIIKRKTRH
IYVANWFFGAYIITIALLHIVNNAELPVSMWKSYSAYAGVQDAMVQWWYGHNAVGFFLTTSFLGMMYYFVPKQAERPIYS
YRLSIVHFWALNFTYMWAGPHHLQYTALPDWAQSLGMVFSLILLAPSWGGMINGIMTLSGAWHKLRTDPILKFLVVALSF
YGMATFEGSMMSIKTVNALSHYTDWTIGHVHSGALGWVAMITIGSMYYMIPRLFGQQKMYSTRLIEVHFWVATIGVVLYI
AAMWVAGVMQGLMWRATEADGTLTYSFVEAVKATYPFYLIRLAGGLCFLGGMLLMAFNVFKTIQGSKAIDAPIPQSAQTP
MVAAQ

Sequences:

>Translated_485_residues
MESSSALQHTQTFNYRVVRQFSIMTIVWGIVGMAVGALIAAQLIWPQLNFGVPWLSYGRLRPLHTNAVIFAFGGSALFAT
SYYIVQRTCQVRLLSDKLAAFTFWGWQAVIVAAAITLPLGYTSSKEYAELEWPIDILITVVWVVYAIVFFGTIIKRKTRH
IYVANWFFGAYIITIALLHIVNNAELPVSMWKSYSAYAGVQDAMVQWWYGHNAVGFFLTTSFLGMMYYFVPKQAERPIYS
YRLSIVHFWALNFTYMWAGPHHLQYTALPDWAQSLGMVFSLILLAPSWGGMINGIMTLSGAWHKLRTDPILKFLVVALSF
YGMATFEGSMMSIKTVNALSHYTDWTIGHVHSGALGWVAMITIGSMYYMIPRLFGQQKMYSTRLIEVHFWVATIGVVLYI
AAMWVAGVMQGLMWRATEADGTLTYSFVEAVKATYPFYLIRLAGGLCFLGGMLLMAFNVFKTIQGSKAIDAPIPQSAQTP
MVAAQ
>Mature_485_residues
MESSSALQHTQTFNYRVVRQFSIMTIVWGIVGMAVGALIAAQLIWPQLNFGVPWLSYGRLRPLHTNAVIFAFGGSALFAT
SYYIVQRTCQVRLLSDKLAAFTFWGWQAVIVAAAITLPLGYTSSKEYAELEWPIDILITVVWVVYAIVFFGTIIKRKTRH
IYVANWFFGAYIITIALLHIVNNAELPVSMWKSYSAYAGVQDAMVQWWYGHNAVGFFLTTSFLGMMYYFVPKQAERPIYS
YRLSIVHFWALNFTYMWAGPHHLQYTALPDWAQSLGMVFSLILLAPSWGGMINGIMTLSGAWHKLRTDPILKFLVVALSF
YGMATFEGSMMSIKTVNALSHYTDWTIGHVHSGALGWVAMITIGSMYYMIPRLFGQQKMYSTRLIEVHFWVATIGVVLYI
AAMWVAGVMQGLMWRATEADGTLTYSFVEAVKATYPFYLIRLAGGLCFLGGMLLMAFNVFKTIQGSKAIDAPIPQSAQTP
MVAAQ

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 54556; Mature: 54556

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSSALQHTQTFNYRVVRQFSIMTIVWGIVGMAVGALIAAQLIWPQLNFGVPWLSYGRL
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RPLHTNAVIFAFGGSALFATSYYIVQRTCQVRLLSDKLAAFTFWGWQAVIVAAAITLPLG
CEEECCEEEEEECCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
YTSSKEYAELEWPIDILITVVWVVYAIVFFGTIIKRKTRHIYVANWFFGAYIITIALLHI
CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH
VNNAELPVSMWKSYSAYAGVQDAMVQWWYGHNAVGFFLTTSFLGMMYYFVPKQAERPIYS
HCCCCCCHHHHHCHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
YRLSIVHFWALNFTYMWAGPHHLQYTALPDWAQSLGMVFSLILLAPSWGGMINGIMTLSG
HHHHHHEEEEECEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
AWHKLRTDPILKFLVVALSFYGMATFEGSMMSIKTVNALSHYTDWTIGHVHSGALGWVAM
CHHHHCCCHHHHHHHHHHHHHHHHEECCCEEEEHHHHHHHHHCCCEECCCCCCHHHHHHH
ITIGSMYYMIPRLFGQQKMYSTRLIEVHFWVATIGVVLYIAAMWVAGVMQGLMWRATEAD
HHHHHHHHHHHHHHCCHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
GTLTYSFVEAVKATYPFYLIRLAGGLCFLGGMLLMAFNVFKTIQGSKAIDAPIPQSAQTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
MVAAQ
CCCCC
>Mature Secondary Structure
MESSSALQHTQTFNYRVVRQFSIMTIVWGIVGMAVGALIAAQLIWPQLNFGVPWLSYGRL
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RPLHTNAVIFAFGGSALFATSYYIVQRTCQVRLLSDKLAAFTFWGWQAVIVAAAITLPLG
CEEECCEEEEEECCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
YTSSKEYAELEWPIDILITVVWVVYAIVFFGTIIKRKTRHIYVANWFFGAYIITIALLHI
CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH
VNNAELPVSMWKSYSAYAGVQDAMVQWWYGHNAVGFFLTTSFLGMMYYFVPKQAERPIYS
HCCCCCCHHHHHCHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
YRLSIVHFWALNFTYMWAGPHHLQYTALPDWAQSLGMVFSLILLAPSWGGMINGIMTLSG
HHHHHHEEEEECEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
AWHKLRTDPILKFLVVALSFYGMATFEGSMMSIKTVNALSHYTDWTIGHVHSGALGWVAM
CHHHHCCCHHHHHHHHHHHHHHHHEECCCEEEEHHHHHHHHHCCCEECCCCCCHHHHHHH
ITIGSMYYMIPRLFGQQKMYSTRLIEVHFWVATIGVVLYIAAMWVAGVMQGLMWRATEAD
HHHHHHHHHHHHHHCCHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
GTLTYSFVEAVKATYPFYLIRLAGGLCFLGGMLLMAFNVFKTIQGSKAIDAPIPQSAQTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
MVAAQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8386371; 12597275 [H]