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The map label for this gene is ugpQ [H]

Identifier: 187928189

GI number: 187928189

Start: 1168050

End: 1168802

Strand: Direct

Name: ugpQ [H]

Synonym: Rpic_1096

Alternate gene names: 187928189

Gene position: 1168050-1168802 (Clockwise)

Preceding gene: 187928188

Following gene: 187928190

Centisome position: 29.63

GC content: 67.07

Gene sequence:

>753_bases
ATGACCGGCGCGCGCGCATTGCCGGCGTGGCCGTATCCGCGTGCCATTGCTCACCGTGGGGCAGGGAAGCTGGCGCCGGA
GAACACGCTGGCGGCCTTCCGCCACGGCGCCTCGTTCGGCTACCGCATGTTCGAATTCGACGTGAAGCTCTCTGGCGACA
GCGCATCGGTCCTGTTGCACGACGCCACGCTGGATCGGACCACGAACGGCGCCGGCCGCCTCGATGCGCTCACGCTCGGG
CAGATCGCGCAACTGGATGCGGGCAGCTGGCACAGCCCAGCCTACGCTGGCGAGCCAGTGCCCACGCTGGCCGCCATCGC
GCGCTACCTGCGCGCCAACGGATTCCTCGCCAATATCGAGATTAAGCCGGTGCCGGGCGTCGAGTGGCGCACGGGCGCTG
CTGTCGCGCTCGACGCCCGCACGTTGTGGGCCGGCGCCGAGGTGCCGCCGCTGCTGTCGTCGTTTTCCGAAGATGCGCTG
GCTGCGGCGCGCGAAGCTGTGCCGGAATTGCCTCGCGCGTTGCTGCTCGACAAGCTCCCGGCCGATTGGCTCGATCGCCT
GCGCGCATTGGATTGTGTTGCGCTCGACGCCAACCATCGCGAACTGACGCCCGAGATCATTGACCAGGCACACGCCGCAG
GCTTTCGCGTCTGCTGCTATACCGTCAACGACCTGGATCGCGCACACCTGCTTTGGAGCGCGGGACTGGACAGTTTGATC
ACCGATTGGGTAGATCGTATTTCGCCCGCCTGA

Upstream 100 bases:

>100_bases
ACGCCAGCGTAAAGGCGGGCGACAAGCTACCCATCACCGCGTCGGCCGAGCATCTGCATTGGTTCGACCCCCAAACCACG
CGCCGCATCGAGGCCCTGGC

Downstream 100 bases:

>100_bases
ATGTGACGGAAGCATGGTTTTGACGTGGCATAACAAGGATCGTTTGTCACGTCAAAGAATCAGAATATTGCTTATAAACA
TGCTATGCTTCTGCCTCGTG

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTGARALPAWPYPRAIAHRGAGKLAPENTLAAFRHGASFGYRMFEFDVKLSGDSASVLLHDATLDRTTNGAGRLDALTLG
QIAQLDAGSWHSPAYAGEPVPTLAAIARYLRANGFLANIEIKPVPGVEWRTGAAVALDARTLWAGAEVPPLLSSFSEDAL
AAAREAVPELPRALLLDKLPADWLDRLRALDCVALDANHRELTPEIIDQAHAAGFRVCCYTVNDLDRAHLLWSAGLDSLI
TDWVDRISPA

Sequences:

>Translated_250_residues
MTGARALPAWPYPRAIAHRGAGKLAPENTLAAFRHGASFGYRMFEFDVKLSGDSASVLLHDATLDRTTNGAGRLDALTLG
QIAQLDAGSWHSPAYAGEPVPTLAAIARYLRANGFLANIEIKPVPGVEWRTGAAVALDARTLWAGAEVPPLLSSFSEDAL
AAAREAVPELPRALLLDKLPADWLDRLRALDCVALDANHRELTPEIIDQAHAAGFRVCCYTVNDLDRAHLLWSAGLDSLI
TDWVDRISPA
>Mature_249_residues
TGARALPAWPYPRAIAHRGAGKLAPENTLAAFRHGASFGYRMFEFDVKLSGDSASVLLHDATLDRTTNGAGRLDALTLGQ
IAQLDAGSWHSPAYAGEPVPTLAAIARYLRANGFLANIEIKPVPGVEWRTGAAVALDARTLWAGAEVPPLLSSFSEDALA
AAREAVPELPRALLLDKLPADWLDRLRALDCVALDANHRELTPEIIDQAHAAGFRVCCYTVNDLDRAHLLWSAGLDSLIT
DWVDRISPA

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=102, Percent_Identity=46.078431372549, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI21361649, Length=107, Percent_Identity=40.1869158878505, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI284055245, Length=107, Percent_Identity=40.1869158878505, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI284055240, Length=107, Percent_Identity=40.1869158878505, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI284055242, Length=107, Percent_Identity=40.1869158878505, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1789858, Length=243, Percent_Identity=50.2057613168724, Blast_Score=231, Evalue=4e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 26892; Mature: 26761

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGARALPAWPYPRAIAHRGAGKLAPENTLAAFRHGASFGYRMFEFDVKLSGDSASVLLH
CCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEE
DATLDRTTNGAGRLDALTLGQIAQLDAGSWHSPAYAGEPVPTLAAIARYLRANGFLANIE
ECHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEE
IKPVPGVEWRTGAAVALDARTLWAGAEVPPLLSSFSEDALAAAREAVPELPRALLLDKLP
EECCCCCCCCCCCEEEEECHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
ADWLDRLRALDCVALDANHRELTPEIIDQAHAAGFRVCCYTVNDLDRAHLLWSAGLDSLI
HHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCHHHHH
TDWVDRISPA
HHHHHHCCCC
>Mature Secondary Structure 
TGARALPAWPYPRAIAHRGAGKLAPENTLAAFRHGASFGYRMFEFDVKLSGDSASVLLH
CCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEE
DATLDRTTNGAGRLDALTLGQIAQLDAGSWHSPAYAGEPVPTLAAIARYLRANGFLANIE
ECHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEE
IKPVPGVEWRTGAAVALDARTLWAGAEVPPLLSSFSEDALAAAREAVPELPRALLLDKLP
EECCCCCCCCCCCEEEEECHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
ADWLDRLRALDCVALDANHRELTPEIIDQAHAAGFRVCCYTVNDLDRAHLLWSAGLDSLI
HHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCHHHHH
TDWVDRISPA
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]