| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is engA
Identifier: 187928156
GI number: 187928156
Start: 1129872
End: 1131215
Strand: Direct
Name: engA
Synonym: Rpic_1063
Alternate gene names: 187928156
Gene position: 1129872-1131215 (Clockwise)
Preceding gene: 187928155
Following gene: 187928157
Centisome position: 28.66
GC content: 61.61
Gene sequence:
>1344_bases ATGAAACCAGTCATTGCCCTTGTAGGGCGGCCGAATGTCGGCAAATCGACCCTCTTCAATCGTCTGACCCGCTCGCGTGA CGCGTTGGTCGCGGATATTCCTGGCCTGACGCGCGATCGCCACTACGGCGAAGGCCGCGTGGGCGACCGTCCGTTCATCG CCATCGATACCGGCGGCTTCGAACCCGTTGCCAAGGAAGGCATCGTGGCTGAGATGGCCAAGCAGACGCGCCAGGCCGTG GTTGAAGCCGATGTCGTGATCTTCATCGTCGATGGACGCCTGGGACTGGCGCCGCAGGATCGCGTGATCGCCGATTACCT GCGCAAAACCGGGCGCCGCATCCTCCTCGCCGTCAACAAGGCCGAGGGCATGCGCTACACCGCCGTCGCCAGCGATTTCT ACGAGCTTGGTCTGGGCGATCCGGCTGCCATTTCGGCCGCGCACGGCGACGGAGTCAATGATTTGGTGGCGGAGGCGCTC GACCTGGCATTTGCCGAGCGCCCCGAGCTTGCCGAGGCAGCCGACGCGCACGACCACGGTACCCGTATCGCCATCGTTGG CCGTCCGAACGTGGGCAAGTCGACGCTGGTGAACGCGCTGATCGGCGAAGAGCGCGTGATTGCGTTCGATATGCCCGGCA CCACGCGCGACGCCATCTACGTGGATTTCGAACGTAACGGCAAGCCTTACACGCTTATCGATACGGCAGGCTTGCGCAAG CGCGGCAAGGTGTTTGAAGCAATCGAGAAGTTCTCGGTGGTGAAGACGCTGCAGTCGATTGCCGACGCCAACGTGGTTGT GCTGATCCTCGATGCGCAGCAGGACATTTCTGATCAGGACGCGCATATCGCCGGCTTCATCGTCGAATCCGGCCGCGCGC TGGTAATCGGTGTGAACAAGTGGGATGGCCTGACCGGGCATGCCCGCGATCGCATCAAGCACGATATGGAGCGCAAGCTG CAGTTCCTGTCGTTTGCCAACGTGCATTACATCTCCGCCAAGGAACGTACGGGCATTGGTGCGCTGATGAAGTCCGTGGA CGCCGCTTATGCTGCCGCCATGGTCAAGCTGCCGACGCCCAAGCTCACGCGTGTGCTGATGGAGGCGGTCGAGTATCAGC AGCCGCGACGCGCAGGCGTTTCACGCCCTAAGCTGCGCTACGCGCACCAGGGCGGTTCCAACCCGCCGATCGTGGTGATT CACGGCAATGCATTGTCGAATATTCCTGAAACCTATCGCCGCTTCCTGGAAGGGCGTTTCCGCGAGGCCTTCCAACTGAA GGGCACACCGCTGCGGATCGAATTTCGTACGAACAAAAACCCGTACGCCCAATCGAACGATTGA
Upstream 100 bases:
>100_bases GTCTTGCATCTGCGTCATCAGGCATTCAGCCGTGCAGATGCCAACCGCAGTTGCAGCAACCAGAATTTGCCGTGGCGCCA TTCGCGTACGGCACACAAGC
Downstream 100 bases:
>100_bases GCAGCGCGCGGGCGGTGCTCGTCGGCAGGGGCGTGTGACGCGGGGGCATTCGAACGGGGGATCACCAAAAAGGCCGAGCC AATTCATATGGCGGGGTCAT
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGDRPFIAIDTGGFEPVAKEGIVAEMAKQTRQAV VEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNKAEGMRYTAVASDFYELGLGDPAAISAAHGDGVNDLVAEAL DLAFAERPELAEAADAHDHGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLRK RGKVFEAIEKFSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIGVNKWDGLTGHARDRIKHDMERKL QFLSFANVHYISAKERTGIGALMKSVDAAYAAAMVKLPTPKLTRVLMEAVEYQQPRRAGVSRPKLRYAHQGGSNPPIVVI HGNALSNIPETYRRFLEGRFREAFQLKGTPLRIEFRTNKNPYAQSND
Sequences:
>Translated_447_residues MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGDRPFIAIDTGGFEPVAKEGIVAEMAKQTRQAV VEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNKAEGMRYTAVASDFYELGLGDPAAISAAHGDGVNDLVAEAL DLAFAERPELAEAADAHDHGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLRK RGKVFEAIEKFSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIGVNKWDGLTGHARDRIKHDMERKL QFLSFANVHYISAKERTGIGALMKSVDAAYAAAMVKLPTPKLTRVLMEAVEYQQPRRAGVSRPKLRYAHQGGSNPPIVVI HGNALSNIPETYRRFLEGRFREAFQLKGTPLRIEFRTNKNPYAQSND >Mature_447_residues MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGDRPFIAIDTGGFEPVAKEGIVAEMAKQTRQAV VEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNKAEGMRYTAVASDFYELGLGDPAAISAAHGDGVNDLVAEAL DLAFAERPELAEAADAHDHGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLRK RGKVFEAIEKFSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIGVNKWDGLTGHARDRIKHDMERKL QFLSFANVHYISAKERTGIGALMKSVDAAYAAAMVKLPTPKLTRVLMEAVEYQQPRRAGVSRPKLRYAHQGGSNPPIVVI HGNALSNIPETYRRFLEGRFREAFQLKGTPLRIEFRTNKNPYAQSND
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=472, Percent_Identity=50.4237288135593, Blast_Score=462, Evalue=1e-131, Organism=Escherichia coli, GI2367268, Length=120, Percent_Identity=37.5, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788919, Length=161, Percent_Identity=32.2981366459627, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323665, Length=186, Percent_Identity=27.4193548387097, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_RALPJ (B2U9V3)
Other databases:
- EMBL: CP001068 - RefSeq: YP_001898643.1 - GeneID: 6288143 - GenomeReviews: CP001068_GR - KEGG: rpi:Rpic_1063 - HOGENOM: HBG592135 - OMA: TRDRTYQ - ProtClustDB: PRK00093 - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 48969; Mature: 48969
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGDRPFIAIDTGGF CCCEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK CHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEC AEGMRYTAVASDFYELGLGDPAAISAAHGDGVNDLVAEALDLAFAERPELAEAADAHDHG CCCCEEEEEHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCC TRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLRK CEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCH RGKVFEAIEKFSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIGVNK HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECC WDGLTGHARDRIKHDMERKLQFLSFANVHYISAKERTGIGALMKSVDAAYAAAMVKLPTP CCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHEECCCH KLTRVLMEAVEYQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLEGRF HHHHHHHHHHHHCCHHHCCCCCCCCHHHHCCCCCCCEEEEECCHHHCCHHHHHHHHHHHH REAFQLKGTPLRIEFRTNKNPYAQSND HHHHHCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGDRPFIAIDTGGF CCCEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK CHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEC AEGMRYTAVASDFYELGLGDPAAISAAHGDGVNDLVAEALDLAFAERPELAEAADAHDHG CCCCEEEEEHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCC TRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLRK CEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCH RGKVFEAIEKFSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIGVNK HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECC WDGLTGHARDRIKHDMERKLQFLSFANVHYISAKERTGIGALMKSVDAAYAAAMVKLPTP CCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHEECCCH KLTRVLMEAVEYQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLEGRF HHHHHHHHHHHHCCHHHCCCCCCCCHHHHCCCCCCCEEEEECCHHHCCHHHHHHHHHHHH REAFQLKGTPLRIEFRTNKNPYAQSND HHHHHCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA