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The map label for this gene is recR [H]

Identifier: 187928131

GI number: 187928131

Start: 1103894

End: 1104514

Strand: Direct

Name: recR [H]

Synonym: Rpic_1038

Alternate gene names: 187928131

Gene position: 1103894-1104514 (Clockwise)

Preceding gene: 187928130

Following gene: 187928133

Centisome position: 28.0

GC content: 64.41

Gene sequence:

>621_bases
ATGCGTAACGCTCCAGGCACGCCGTCGGCGCTGCAGATGCTGGTTGAAGCCTTGCGCGTGCTGCCGGGCGTGGGCCCCAA
GTCTGCCCAGAGGATGGCGTATCACCTGATGCAGCATGACCGCGAGGGGGCGGCGCAGCTGGCACAGGCGCTGTCTGAGG
CAACGGAATCGATCCAGCACTGCAGCCGCTGCAATACCTTTACCGAGCAGGAAGTTTGCGAGACCTGCTTGGACACGCGC
CGCGATGCATCGGTCCTGTGCGTGGTGGAAACGCCCGCTGATCAGATGATGATCGAGCAGACGCTGACCTATCGCGGCCA
ATACTTCGTGCTGATGGGGCGGCTCTCGCCGCTGGACAACATCGGCCCGAAAGAGATCCACCTCGAACGCTTGCTGGCCC
GTGCGACCGATCCTGCGCTGGGCGGGCCGTGCACCGAGGTCATCCTCGCAACCAACTTCACCAGCGAAGGTGAGGCGACA
GCCCATTACATTGGCGAGATGTTGAAGGCGCGCGGCATCAAGGCGACGCGTCTTGCGCGTGGCGTGCCGGTAGGCGGTGA
GCTGGAATACGTGGACGCGGGTACCATCGCTCGCGCCGTGCTGGACCGGCGCCAACTCTGA

Upstream 100 bases:

>100_bases
GGCAATCGCCCGAGTACCAGCGCTGGCGTGCGCTGCTGCACCACTTCTATGATCCGATGCCGGAAGTGCTGCACCACACG
ACTGTTGTGGAGCACGCGTG

Downstream 100 bases:

>100_bases
TCTTCCGCAGTTGCTTAAAATTCAGCGTGGACGCGTGCCCCGACGATTGATACCGGGCCGCGATCCCGGTTGTACGCCGG
ATGGACCACATACTGGTAGT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MRNAPGTPSALQMLVEALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQHCSRCNTFTEQEVCETCLDTR
RDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEIHLERLLARATDPALGGPCTEVILATNFTSEGEAT
AHYIGEMLKARGIKATRLARGVPVGGELEYVDAGTIARAVLDRRQL

Sequences:

>Translated_206_residues
MRNAPGTPSALQMLVEALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQHCSRCNTFTEQEVCETCLDTR
RDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEIHLERLLARATDPALGGPCTEVILATNFTSEGEAT
AHYIGEMLKARGIKATRLARGVPVGGELEYVDAGTIARAVLDRRQL
>Mature_206_residues
MRNAPGTPSALQMLVEALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQHCSRCNTFTEQEVCETCLDTR
RDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEIHLERLLARATDPALGGPCTEVILATNFTSEGEAT
AHYIGEMLKARGIKATRLARGVPVGGELEYVDAGTIARAVLDRRQL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=201, Percent_Identity=55.2238805970149, Blast_Score=210, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 22480; Mature: 22480

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNAPGTPSALQMLVEALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQH
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
CSRCNTFTEQEVCETCLDTRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDN
HHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCC
IGPKEIHLERLLARATDPALGGPCTEVILATNFTSEGEATAHYIGEMLKARGIKATRLAR
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHC
GVPVGGELEYVDAGTIARAVLDRRQL
CCCCCCCEEEECHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNAPGTPSALQMLVEALRVLPGVGPKSAQRMAYHLMQHDREGAAQLAQALSEATESIQH
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
CSRCNTFTEQEVCETCLDTRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDN
HHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCC
IGPKEIHLERLLARATDPALGGPCTEVILATNFTSEGEATAHYIGEMLKARGIKATRLAR
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHC
GVPVGGELEYVDAGTIARAVLDRRQL
CCCCCCCEEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]