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The map label for this gene is narP [H]

Identifier: 187928121

GI number: 187928121

Start: 1088810

End: 1089478

Strand: Reverse

Name: narP [H]

Synonym: Rpic_1028

Alternate gene names: 187928121

Gene position: 1089478-1088810 (Counterclockwise)

Preceding gene: 187928123

Following gene: 187928120

Centisome position: 27.63

GC content: 63.23

Gene sequence:

>669_bases
ATGAACACTGTTTTGATCGAAGCCCATCCGTTGGTGCGTACAGGCATTGCGCACCTGCTACGGACGCTCAAAGGCGTCAC
CGGCGTCACTGTCGTCGAGCCAGACGAAGGGATGTTCGACGCCATCGAAACCAATGCCGACGCGGGTCTTCTTGTCATCG
GCCTGCCGCTGCCACATCTCGATGAGTTGTCGGCCATCGGCGAGATCATGCACCGGCCGCACGCGCGCCACGTGGTCGTG
CTGGCTGAATCCGAATCGCCCGACATCATCCGTACGCTGATGCAGATGGGATTGTCCGGGTACACGCTCAAGCATTCGCC
GGGCGAAGTCATCGCGGCTTCGCTGGAACTGGTGCTGGTGGGTGGCCAATACATTCCGGCCAGCGCACTGCTGCCGGAAT
CGCGCCTGGACGGTGCGCCCAACCCTGCGCTCGCTGGCGACCCTCAGACCGATCCGAAGCTGCTCGGCATTACGCCCCGG
CAGTACGAGATTCTGGTGCTGCTCTCGCGCGGGCATCCGGTCAAGACGATCAGCCGCATGCTGAACATCTCCGAGGTGAC
AGCCAAGGCGCATATCAGCACCCTGTATCGGCGCCTGAAAGTACGCAGCCGTACCGAGGCCGTGTACGTCGCCAACCAGC
GCGGCGCGCGCCTGCTGTCGGTCGCCTGA

Upstream 100 bases:

>100_bases
TTCCGCCACTAAAATGATTCGGAACGGGGGTCTGCTCCGGCCTGTATCTCGCCTGGGCGACAAGGATGTTCGCAAGATCG
GTAACAGGTCGAGAACAACG

Downstream 100 bases:

>100_bases
CCCCATCCCCAAATGAAAGCGCGCGTCGCGAAGTCGCGCGCGACGGTCGATATACTGGCCGTATGCTTTCGTCCGTTTTC
CGCTGGTTCTCAGGCCGCGC

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MNTVLIEAHPLVRTGIAHLLRTLKGVTGVTVVEPDEGMFDAIETNADAGLLVIGLPLPHLDELSAIGEIMHRPHARHVVV
LAESESPDIIRTLMQMGLSGYTLKHSPGEVIAASLELVLVGGQYIPASALLPESRLDGAPNPALAGDPQTDPKLLGITPR
QYEILVLLSRGHPVKTISRMLNISEVTAKAHISTLYRRLKVRSRTEAVYVANQRGARLLSVA

Sequences:

>Translated_222_residues
MNTVLIEAHPLVRTGIAHLLRTLKGVTGVTVVEPDEGMFDAIETNADAGLLVIGLPLPHLDELSAIGEIMHRPHARHVVV
LAESESPDIIRTLMQMGLSGYTLKHSPGEVIAASLELVLVGGQYIPASALLPESRLDGAPNPALAGDPQTDPKLLGITPR
QYEILVLLSRGHPVKTISRMLNISEVTAKAHISTLYRRLKVRSRTEAVYVANQRGARLLSVA
>Mature_222_residues
MNTVLIEAHPLVRTGIAHLLRTLKGVTGVTVVEPDEGMFDAIETNADAGLLVIGLPLPHLDELSAIGEIMHRPHARHVVV
LAESESPDIIRTLMQMGLSGYTLKHSPGEVIAASLELVLVGGQYIPASALLPESRLDGAPNPALAGDPQTDPKLLGITPR
QYEILVLLSRGHPVKTISRMLNISEVTAKAHISTLYRRLKVRSRTEAVYVANQRGARLLSVA

Specific function: This protein activates the expression of the nitrate reductase (narGHJI) and formate dehydrogenase-N (fdnGHI) operons and represses the transcription of the fumarate reductase (frdABCD) operon in response to a nitrate/nitrite induction signal transmitted

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=222, Percent_Identity=27.9279279279279, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788222, Length=219, Percent_Identity=26.027397260274, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787473, Length=212, Percent_Identity=27.8301886792453, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1789937, Length=74, Percent_Identity=45.945945945946, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23909; Mature: 23909

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVLIEAHPLVRTGIAHLLRTLKGVTGVTVVEPDEGMFDAIETNADAGLLVIGLPLPHL
CCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCCEEEEECCCCCH
DELSAIGEIMHRPHARHVVVLAESESPDIIRTLMQMGLSGYTLKHSPGEVIAASLELVLV
HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEEE
GGQYIPASALLPESRLDGAPNPALAGDPQTDPKLLGITPRQYEILVLLSRGHPVKTISRM
CCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCHHHHHHH
LNISEVTAKAHISTLYRRLKVRSRTEAVYVANQRGARLLSVA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECC
>Mature Secondary Structure
MNTVLIEAHPLVRTGIAHLLRTLKGVTGVTVVEPDEGMFDAIETNADAGLLVIGLPLPHL
CCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCCEEEEECCCCCH
DELSAIGEIMHRPHARHVVVLAESESPDIIRTLMQMGLSGYTLKHSPGEVIAASLELVLV
HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEEE
GGQYIPASALLPESRLDGAPNPALAGDPQTDPKLLGITPRQYEILVLLSRGHPVKTISRM
CCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCHHHHHHH
LNISEVTAKAHISTLYRRLKVRSRTEAVYVANQRGARLLSVA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501030; 9278503 [H]