Click here to switch to the map view.

The map label for this gene is rseB [H]

Identifier: 187928017

GI number: 187928017

Start: 975701

End: 976798

Strand: Direct

Name: rseB [H]

Synonym: Rpic_0922

Alternate gene names: 187928017

Gene position: 975701-976798 (Clockwise)

Preceding gene: 187928016

Following gene: 187928018

Centisome position: 24.75

GC content: 61.02

Gene sequence:

>1098_bases
ATGTCGAAGGTGTGGCACCCCGTTGCCGGGGCAGGCGCCCGCAAACTGCAGGCCGTTCGTCGGTCGGTTTTTCTTCTTCT
GTGTGTTTCGGCGCTGGCGACAGCTGCTCCGCCACAGCCTGATCCCATGCCGCGCAAGGAGGCTGCCTCCTGGCTGGCGA
AAATCCATCGCGCGGCGCTCAAGCAGAACTATGTCGGCACGCTCACGTATCAGCGTGGCACCGGCATGCACTCCACCCGC
ATCCAGCATTACGCTGATCTTTTCAATAACGAGTACGAGCGCGTCGAAGCGCTGGACGGCAAGCAGCGCGAAACGCTGCG
CCAGAATGACGTCGTGCGGAACCTGATTTACGACGTCAAACTCGTGGTGACAGAGAAGCAGGAACACAAGGACAGCTTCC
CCGCGCTGCTCGCCACCACCAATGGCGATGTGCTCGACCAGTACGACATGCGGCACCTGCCGACCGAGCGCGTCGCGGGC
ATGGATTGCGAAGTCTTCCAGCTTGATCCGAAGGACGGCTACCGCTACGCCTACCGCATCTGGGCGGAGCGCAACAGTGG
TTTGCTGATGCGCGCCCAGACCATCGGTGAAGATGGCAAGGTGCTTGAACAGGTTGCCTTCTCGCAAGTCGAGTTGGGTG
TGCCGTCGGAGAAACAGAGGATCGTCGCTGCGTTCAAGAACCTGAACGGGTGGAATCAATACGAGATCGTGACGCAGCCG
ACCAATCTGGCCGAGCAAGGCTGGACGATTGGCAACCCCGTCAAGGGCTTCCAGAAGATCCGCGAGGTGCGCCGTCCGCT
GGGCGATATTGCGCCGGCCGGCAAGAACAGTTCCGGCTTCGAGGTCCAGCAGGTCGTGTTTAGTGACGGGTTGGCAGGGC
TGTCGCTCTTTATCGAGCCGGTATCGGAAAAGCGCACCCGCCGCGAAGGCTTCATCTCGCAAGGCGCTACACATGTGATG
GTGCGACGTGTTGCCGATTTCTGGTTGACGATCGTAGGCGAAGTCCCGTTTGCAACCATCAAGCAGTTTGGCGCAGCGGT
CGACTACAAGCCGGTGTCCGCCAACGCAACCAACAGGCCGGCCAGCGCGCCGCAGTAG

Upstream 100 bases:

>100_bases
GGCAATCTGCGACCAACGGGATGGTAGTTCCGTATCTGCGCGCAGTGGCCAATGGGGTGGCGAACACCCAGGACTCCAAT
CAGGAATAATGCGGGCATCC

Downstream 100 bases:

>100_bases
CCGCAGAGCTGGCATCTGTCTTGGGTGCGCGGCGTTGCTGCGCAGTGCCATTTCTCTATCTGTCCTTGTTCCGGGGAGCT
TTCATGTGTACCGCTCGATC

Product: putative sigma E regulatory protein MucB/RseB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSKVWHPVAGAGARKLQAVRRSVFLLLCVSALATAAPPQPDPMPRKEAASWLAKIHRAALKQNYVGTLTYQRGTGMHSTR
IQHYADLFNNEYERVEALDGKQRETLRQNDVVRNLIYDVKLVVTEKQEHKDSFPALLATTNGDVLDQYDMRHLPTERVAG
MDCEVFQLDPKDGYRYAYRIWAERNSGLLMRAQTIGEDGKVLEQVAFSQVELGVPSEKQRIVAAFKNLNGWNQYEIVTQP
TNLAEQGWTIGNPVKGFQKIREVRRPLGDIAPAGKNSSGFEVQQVVFSDGLAGLSLFIEPVSEKRTRREGFISQGATHVM
VRRVADFWLTIVGEVPFATIKQFGAAVDYKPVSANATNRPASAPQ

Sequences:

>Translated_365_residues
MSKVWHPVAGAGARKLQAVRRSVFLLLCVSALATAAPPQPDPMPRKEAASWLAKIHRAALKQNYVGTLTYQRGTGMHSTR
IQHYADLFNNEYERVEALDGKQRETLRQNDVVRNLIYDVKLVVTEKQEHKDSFPALLATTNGDVLDQYDMRHLPTERVAG
MDCEVFQLDPKDGYRYAYRIWAERNSGLLMRAQTIGEDGKVLEQVAFSQVELGVPSEKQRIVAAFKNLNGWNQYEIVTQP
TNLAEQGWTIGNPVKGFQKIREVRRPLGDIAPAGKNSSGFEVQQVVFSDGLAGLSLFIEPVSEKRTRREGFISQGATHVM
VRRVADFWLTIVGEVPFATIKQFGAAVDYKPVSANATNRPASAPQ
>Mature_364_residues
SKVWHPVAGAGARKLQAVRRSVFLLLCVSALATAAPPQPDPMPRKEAASWLAKIHRAALKQNYVGTLTYQRGTGMHSTRI
QHYADLFNNEYERVEALDGKQRETLRQNDVVRNLIYDVKLVVTEKQEHKDSFPALLATTNGDVLDQYDMRHLPTERVAGM
DCEVFQLDPKDGYRYAYRIWAERNSGLLMRAQTIGEDGKVLEQVAFSQVELGVPSEKQRIVAAFKNLNGWNQYEIVTQPT
NLAEQGWTIGNPVKGFQKIREVRRPLGDIAPAGKNSSGFEVQQVVFSDGLAGLSLFIEPVSEKRTRREGFISQGATHVMV
RRVADFWLTIVGEVPFATIKQFGAAVDYKPVSANATNRPASAPQ

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=327, Percent_Identity=26.605504587156, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 40780; Mature: 40649

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVWHPVAGAGARKLQAVRRSVFLLLCVSALATAAPPQPDPMPRKEAASWLAKIHRAAL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
KQNYVGTLTYQRGTGMHSTRIQHYADLFNNEYERVEALDGKQRETLRQNDVVRNLIYDVK
HCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LVVTEKQEHKDSFPALLATTNGDVLDQYDMRHLPTERVAGMDCEVFQLDPKDGYRYAYRI
EEEECCHHHCCCCCEEEEECCCCHHCCHHHHCCCHHHHCCCCCEEEEECCCCCCEEEEEE
WAERNSGLLMRAQTIGEDGKVLEQVAFSQVELGVPSEKQRIVAAFKNLNGWNQYEIVTQP
EEECCCCEEEEEHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECC
TNLAEQGWTIGNPVKGFQKIREVRRPLGDIAPAGKNSSGFEVQQVVFSDGLAGLSLFIEP
CCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHC
VSEKRTRREGFISQGATHVMVRRVADFWLTIVGEVPFATIKQFGAAVDYKPVSANATNRP
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCC
ASAPQ
CCCCC
>Mature Secondary Structure 
SKVWHPVAGAGARKLQAVRRSVFLLLCVSALATAAPPQPDPMPRKEAASWLAKIHRAAL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
KQNYVGTLTYQRGTGMHSTRIQHYADLFNNEYERVEALDGKQRETLRQNDVVRNLIYDVK
HCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LVVTEKQEHKDSFPALLATTNGDVLDQYDMRHLPTERVAGMDCEVFQLDPKDGYRYAYRI
EEEECCHHHCCCCCEEEEECCCCHHCCHHHHCCCHHHHCCCCCEEEEECCCCCCEEEEEE
WAERNSGLLMRAQTIGEDGKVLEQVAFSQVELGVPSEKQRIVAAFKNLNGWNQYEIVTQP
EEECCCCEEEEEHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECC
TNLAEQGWTIGNPVKGFQKIREVRRPLGDIAPAGKNSSGFEVQQVVFSDGLAGLSLFIEP
CCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHC
VSEKRTRREGFISQGATHVMVRRVADFWLTIVGEVPFATIKQFGAAVDYKPVSANATNRP
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCC
ASAPQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]