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The map label for this gene is yceD [C]

Identifier: 187928007

GI number: 187928007

Start: 967151

End: 967687

Strand: Direct

Name: yceD [C]

Synonym: Rpic_0912

Alternate gene names: 187928007

Gene position: 967151-967687 (Clockwise)

Preceding gene: 187928004

Following gene: 187928008

Centisome position: 24.53

GC content: 62.01

Gene sequence:

>537_bases
GTGGATTTTCGTGCATTCGATCTTTTCGCGTTCATTCGCGCGGGTGAGCCGGCAAGCGGCACGGTCTATCTGACCGATAC
GCCTCGTCTGCTGTCCGAGCAAGCCGTCGACGCCCCGGCTGACGCCAACACGCAATTTCGTTGGCAGCTGCAGGGTGTGG
CGCGCGAGGAGGCCACCGCCGGCCAGTTGCCGCGTCAGCGGCTCTTCGTGGATCTGGAAGTGGATGGCGCCATCTGGCTG
CAATGTCAGCGGTGCCTCAAAGCTTACGAGCAGCCTCTGCCGGTGCGCGCGCGTCTGGAAGTCGTGCGCTCGGAAGCCGA
TGCCGATGCCGCCCCGCTGGATGACGATGAGGCTGATGTCATCGTTGGCTCGCGCAGCTTCGATCTGATCACGCAGATCG
AAGATGAGCTGTTGCTGGCGTTGCCGGTGTCGCCGCGTCATGCAGTCTGCCCGGATGAGATGTTGCCGGAAGAGACTGAA
GCTGAAAAGAAGCCGTCGCCGTTCGCGGTGCTGGCCAACCTTAAGACCAAACATTAG

Upstream 100 bases:

>100_bases
AGTGTCGCAAACCGTGCGCCCAGGCGCAAGGTGTCAGGCGCTGCAAGGCGGGTCCATCCGGTTCGCGCATCAACAGCAAC
GCGTTTAGTGGGTTCGATTC

Downstream 100 bases:

>100_bases
GCGTGCGCGGATATTGTGCGCGCTGATGGCAGTACGTTTCACACGCCTACCGGAATGGCTACGCTCCGGCTCCGTGTGAT
GTGATAAAATCGATCAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MDFRAFDLFAFIRAGEPASGTVYLTDTPRLLSEQAVDAPADANTQFRWQLQGVAREEATAGQLPRQRLFVDLEVDGAIWL
QCQRCLKAYEQPLPVRARLEVVRSEADADAAPLDDDEADVIVGSRSFDLITQIEDELLLALPVSPRHAVCPDEMLPEETE
AEKKPSPFAVLANLKTKH

Sequences:

>Translated_178_residues
MDFRAFDLFAFIRAGEPASGTVYLTDTPRLLSEQAVDAPADANTQFRWQLQGVAREEATAGQLPRQRLFVDLEVDGAIWL
QCQRCLKAYEQPLPVRARLEVVRSEADADAAPLDDDEADVIVGSRSFDLITQIEDELLLALPVSPRHAVCPDEMLPEETE
AEKKPSPFAVLANLKTKH
>Mature_178_residues
MDFRAFDLFAFIRAGEPASGTVYLTDTPRLLSEQAVDAPADANTQFRWQLQGVAREEATAGQLPRQRLFVDLEVDGAIWL
QCQRCLKAYEQPLPVRARLEVVRSEADADAAPLDDDEADVIVGSRSFDLITQIEDELLLALPVSPRHAVCPDEMLPEETE
AEKKPSPFAVLANLKTKH

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19788; Mature: 19788

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFRAFDLFAFIRAGEPASGTVYLTDTPRLLSEQAVDAPADANTQFRWQLQGVAREEATA
CCCCHHHHHHHEECCCCCCCEEEECCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHH
GQLPRQRLFVDLEVDGAIWLQCQRCLKAYEQPLPVRARLEVVRSEADADAAPLDDDEADV
HCCCCHHEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCE
IVGSRSFDLITQIEDELLLALPVSPRHAVCPDEMLPEETEAEKKPSPFAVLANLKTKH
EECCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCCHHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure
MDFRAFDLFAFIRAGEPASGTVYLTDTPRLLSEQAVDAPADANTQFRWQLQGVAREEATA
CCCCHHHHHHHEECCCCCCCEEEECCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHH
GQLPRQRLFVDLEVDGAIWLQCQRCLKAYEQPLPVRARLEVVRSEADADAAPLDDDEADV
HCCCCHHEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCE
IVGSRSFDLITQIEDELLLALPVSPRHAVCPDEMLPEETEAEKKPSPFAVLANLKTKH
EECCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCCHHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA