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The map label for this gene is fdx [H]

Identifier: 187927985

GI number: 187927985

Start: 943570

End: 943908

Strand: Direct

Name: fdx [H]

Synonym: Rpic_0890

Alternate gene names: 187927985

Gene position: 943570-943908 (Clockwise)

Preceding gene: 187927984

Following gene: 187927986

Centisome position: 23.93

GC content: 60.77

Gene sequence:

>339_bases
ATGCCACACATCGTCGTCCTTCCTCACGTCGAATACTGCCCGGAAGGGGCCGTGATCGAAGCCAAGCCCGGCACGACCAT
CTGCGATGCGCTGTTGGGCGCTGACATTGAGATCGAGCATGCATGCGAGAAGTCGTGTGCCTGCACGACCTGCCACGTGA
TCGTGCGCGAGGGCTTCAATTCGCTCGATGAGGCGACCGAGAAGGAAGAGGATCTGCTCGACAAGGCCTGGGGCCTGGAG
CCGAACTCGCGCCTGTCCTGCCAGGCCAAGGTGGCGGAGTCGGACCTGACCGTCGAAATTCCGAAGTACACGATCAACCA
CGCCAAGGAAAACCACTGA

Upstream 100 bases:

>100_bases
GACCGCGGCATTCGCAAGGCGCTCGCCGGCAAACGTATCGAGGAACTCGGCTGATCGCCGATCGGATCCCACCAAACACA
TTTATCGAACGAGTTTCTTC

Downstream 100 bases:

>100_bases
GCCGAGTGGCCAGCGGTGGAGGGAGCCCATCATGAAATGGAACGACATCCAGCAGATCGCAGAAGCGCTGTATGACAAGT
ACCCCGACGTCGATCCGACG

Product: ferredoxin, 2Fe-2S type, ISC system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MPHIVVLPHVEYCPEGAVIEAKPGTTICDALLGADIEIEHACEKSCACTTCHVIVREGFNSLDEATEKEEDLLDKAWGLE
PNSRLSCQAKVAESDLTVEIPKYTINHAKENH

Sequences:

>Translated_112_residues
MPHIVVLPHVEYCPEGAVIEAKPGTTICDALLGADIEIEHACEKSCACTTCHVIVREGFNSLDEATEKEEDLLDKAWGLE
PNSRLSCQAKVAESDLTVEIPKYTINHAKENH
>Mature_111_residues
PHIVVLPHVEYCPEGAVIEAKPGTTICDALLGADIEIEHACEKSCACTTCHVIVREGFNSLDEATEKEEDLLDKAWGLEP
NSRLSCQAKVAESDLTVEIPKYTINHAKENH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788874, Length=111, Percent_Identity=71.1711711711712, Blast_Score=168, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI17544202, Length=97, Percent_Identity=42.2680412371134, Blast_Score=68, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6325004, Length=86, Percent_Identity=43.0232558139535, Blast_Score=69, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24661503, Length=112, Percent_Identity=39.2857142857143, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12285; Mature: 12154

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHIVVLPHVEYCPEGAVIEAKPGTTICDALLGADIEIEHACEKSCACTTCHVIVREGFN
CCEEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCCEEHHHHCCCCCHHHHHHHHHHCCC
SLDEATEKEEDLLDKAWGLEPNSRLSCQAKVAESDLTVEIPKYTINHAKENH
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEECCCEEECCCCCCC
>Mature Secondary Structure 
PHIVVLPHVEYCPEGAVIEAKPGTTICDALLGADIEIEHACEKSCACTTCHVIVREGFN
CEEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCCEEHHHHCCCCCHHHHHHHHHHCCC
SLDEATEKEEDLLDKAWGLEPNSRLSCQAKVAESDLTVEIPKYTINHAKENH
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8809750; 10984043 [H]