| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927963
Identifier: 187927963
GI number: 187927963
Start: 918231
End: 919166
Strand: Direct
Name: 187927963
Synonym: Rpic_0868
Alternate gene names: NA
Gene position: 918231-919166 (Clockwise)
Preceding gene: 187927961
Following gene: 187927965
Centisome position: 23.29
GC content: 67.2
Gene sequence:
>936_bases ATGAGACAAGCCGCCGATTCCTCCCTCGCCGCACGCGCCGCCGACAAGCTCCTCGGCGTGATGCTGATCGCCGTGTCCGC CGCATCCTTCGGCGCGATGGCCATCTTCACGCATTACGCCTATGCGAGCGGCGCCAATGTGGTCGGTCTGCTGATCGTGC GCTTTGTGATCGCGGCCGCCTCGCTGATGGCTGTGATGCGTGTTCGTCGCATCGGCATCCCGCCGTGGTCGCGCGTGGTG GGGCTGGCGGCCATGGGCGGCATTGGCTATGCAGGGCAGTCGTTCGCGTTTTTTACGGCGCTGAACTACGCGCCGGCCAG CCTGGTGGCGTTGCTGCTGTATCTGTATCCGATGTTCGTGACGGTGCTGGCGGCGATTTTCCTGCGCGAGCGGCTGACCA CCACGGCGATCATCGCGCTGGTGCTGTGCTCGGTCGGGGCGGGGCTGACGGTGGGCGGCGCGGGCCTGTCGGGCGGCAGC CTGCTCGGCATTGGGCTGGGGGTGGCCTCCGCAGTGATTTACTCGATCTACATCACGGTCGGTGCACGGGTCACGCGCGG GCTGGATCCATTGGCGTGCACGACCGTCATCTGTACCGCTGCGGCCGTGGTGTACACGGGGATGGCGTTGCTCGGCGCGC CTGCGCATCTGCCCGGCTCGTTCAGCGGCTGGGCAGCGGCGCTGGCCATCGCAGGCTTGTCGACAGTGGTGGCGATCCTG ACGTTCTTTGCCGGCTTGCAGAAGTTGGGGGCCGCGCAGGCGTCGATGCTGTCTACGCTGGAGCCGGTGGTGACGGTGCT CTTGGCCGCATTGCTGCTCGGCGAGTCGATCGCGCCCATGCAGATGGCTGGCGGCGCGTTGATCCTGGCGGGCGTGCTGT GGCTCACGCGTGCGGATGCCAAACCCACTGGCCACACTGCGGATGACATGGCCTGA
Upstream 100 bases:
>100_bases GCGCGCCTTCATGCCTGCCGGGCCGCTTGGCGAGACGGCAACGCTACAATGGCCGCCCCGCACCCGCAGACGGCGACACC AAACAAAAACGCCGCACGCC
Downstream 100 bases:
>100_bases AGCCGGGTCCTCACGCGCAACAAAAAACCGCCCAGCGTGAACTGGGCGGTTTTGCTTTCTGCCTTGAGGCGATTACTTCT TCGGGCCGCTCGGCAGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MRQAADSSLAARAADKLLGVMLIAVSAASFGAMAIFTHYAYASGANVVGLLIVRFVIAAASLMAVMRVRRIGIPPWSRVV GLAAMGGIGYAGQSFAFFTALNYAPASLVALLLYLYPMFVTVLAAIFLRERLTTTAIIALVLCSVGAGLTVGGAGLSGGS LLGIGLGVASAVIYSIYITVGARVTRGLDPLACTTVICTAAAVVYTGMALLGAPAHLPGSFSGWAAALAIAGLSTVVAIL TFFAGLQKLGAAQASMLSTLEPVVTVLLAALLLGESIAPMQMAGGALILAGVLWLTRADAKPTGHTADDMA
Sequences:
>Translated_311_residues MRQAADSSLAARAADKLLGVMLIAVSAASFGAMAIFTHYAYASGANVVGLLIVRFVIAAASLMAVMRVRRIGIPPWSRVV GLAAMGGIGYAGQSFAFFTALNYAPASLVALLLYLYPMFVTVLAAIFLRERLTTTAIIALVLCSVGAGLTVGGAGLSGGS LLGIGLGVASAVIYSIYITVGARVTRGLDPLACTTVICTAAAVVYTGMALLGAPAHLPGSFSGWAAALAIAGLSTVVAIL TFFAGLQKLGAAQASMLSTLEPVVTVLLAALLLGESIAPMQMAGGALILAGVLWLTRADAKPTGHTADDMA >Mature_311_residues MRQAADSSLAARAADKLLGVMLIAVSAASFGAMAIFTHYAYASGANVVGLLIVRFVIAAASLMAVMRVRRIGIPPWSRVV GLAAMGGIGYAGQSFAFFTALNYAPASLVALLLYLYPMFVTVLAAIFLRERLTTTAIIALVLCSVGAGLTVGGAGLSGGS LLGIGLGVASAVIYSIYITVGARVTRGLDPLACTTVICTAAAVVYTGMALLGAPAHLPGSFSGWAAALAIAGLSTVVAIL TFFAGLQKLGAAQASMLSTLEPVVTVLLAALLLGESIAPMQMAGGALILAGVLWLTRADAKPTGHTADDMA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31364; Mature: 31364
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQAADSSLAARAADKLLGVMLIAVSAASFGAMAIFTHYAYASGANVVGLLIVRFVIAAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SLMAVMRVRRIGIPPWSRVVGLAAMGGIGYAGQSFAFFTALNYAPASLVALLLYLYPMFV HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH TVLAAIFLRERLTTTAIIALVLCSVGAGLTVGGAGLSGGSLLGIGLGVASAVIYSIYITV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH GARVTRGLDPLACTTVICTAAAVVYTGMALLGAPAHLPGSFSGWAAALAIAGLSTVVAIL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TFFAGLQKLGAAQASMLSTLEPVVTVLLAALLLGESIAPMQMAGGALILAGVLWLTRADA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHCCC KPTGHTADDMA CCCCCCCCCCC >Mature Secondary Structure MRQAADSSLAARAADKLLGVMLIAVSAASFGAMAIFTHYAYASGANVVGLLIVRFVIAAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SLMAVMRVRRIGIPPWSRVVGLAAMGGIGYAGQSFAFFTALNYAPASLVALLLYLYPMFV HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH TVLAAIFLRERLTTTAIIALVLCSVGAGLTVGGAGLSGGSLLGIGLGVASAVIYSIYITV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH GARVTRGLDPLACTTVICTAAAVVYTGMALLGAPAHLPGSFSGWAAALAIAGLSTVVAIL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TFFAGLQKLGAAQASMLSTLEPVVTVLLAALLLGESIAPMQMAGGALILAGVLWLTRADA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHCCC KPTGHTADDMA CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA