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The map label for this gene is uup-A [H]

Identifier: 187927923

GI number: 187927923

Start: 872058

End: 873968

Strand: Direct

Name: uup-A [H]

Synonym: Rpic_0828

Alternate gene names: 187927923

Gene position: 872058-873968 (Clockwise)

Preceding gene: 187927920

Following gene: 187927924

Centisome position: 22.12

GC content: 66.14

Gene sequence:

>1911_bases
ATGGCCCTGTTTTCCATTACCGATGCGCAACTGGCGTTCGGCCACGTTGCGCTGCTCGACCACACCGATTTCTCGCTGGA
AGCCGGCGAGCGCGTCGGCCTGATCGGCCGCAACGGCACCGGCAAGTCGTCGCTGCTCAAGATCGTGGCGGGGACGACCT
CGCCGGATGACGGGCTGATCGCCCGCCAGAGCGGCGTGACCTCGGCGTATGTGCCGCAAGAGCCCGAATTCGACCCCGAA
CAGACCGTGGCCGAAGCCGTGGCGATGGGCGTGCCGCATGCTGCCGGCCTGCTGGCTGAATACGAGGCGCTGATCACGTC
GATGGGCGACTCCCACGATGAAGACGCGCTGCACAGGCTGCAGGCGCTGCAATCCCAGTTGGAAGCGGCAGACGCGTGGC
AACTGCGCACGCGCGTGGAAACGACGATCGCCCAGCTGGGCCTGCTGCCCGGCGCGCGCATCGGTTCGCTGTCGGGCGGC
CTGACCAAGCGTGTGGCGCTTGCGCAGGCGCTGGTGGGCGCGCCTGACATCCTCCTGTTGGACGAGCCGACCAACCACCT
GGACTACAACTCCATCCGCTGGCTCGAAGACTTGCTGCTGGCCTTCCGCGGCAGCGTGTTGTTCATCACGCACGATCGCG
CCTTCCTCGACCGCGTGGCCACACGCATCATCGAACTCGATCGCGGCAAGCTGCGATCGTACCCCGGCAACTTCACGGCG
TATCAGACGCGCAAGGCGCAGGAGCTGGACGCCGAAGCACTGGAAAACGCCCGCTTCGACAAGCTGCTCGCGCAGGAAGA
AGTGTGGATCCGCAAGGGTGTGGAAGCGCGGCGCACACGCAGCGTCGGCCGCGTGGCGCGGCTGGAACAGATGCGTGTGG
AGCGCCAGGCGCGCCGCGAGGTGCAGGGCAACGTCAAGCTGGAAGTCTCGCAGGGCGATCGCTCCGGCAAGATTGTCGCC
GAGCTGATCGACGTGACCAAGCGCTATGGCGACAAGACCGTCGTCGACAACTTCACCGCCACCATCATGCGCGGCGACAA
GGTCGGGATTCTCGGCGCCAACGGTGTCGGCAAGACCACGCTGCTGAAGCTGATCCTCGGCGAACTGGCACCGGATTCCG
GCACGGTGCGCAACGGCACCAACCTGCAGGTGGCGTACTTCGACCAGATGCGCGCGCAATTGGACCTGAACCGCTCGCTT
GCCGACACTATCAGCCCGGGCAGCGACTGGATTGAAGTCAACGGTCAGCGCAAGCACGTGATGAGCTATCTGGGCGACTT
CCTCTTCCCGCCCGAGCGTGCCCGCTCGCCGGTGGCCTCGCTGTCGGGCGGCGAGCGCAACCGGCTGCTGCTGGCACGCC
TGTTTGCCCGTCCGGCCAACGTGCTGGTGCTCGACGAGCCGACCAACGATCTGGACATCGACACGCTCGAACTGCTGGAA
GAACTGCTGCAGGAATACAGTGGCACCGTATTCCTGGTCTCGCACGACCGCGCGTTCGTCGACAACGTCGTCACTTCGGT
GATTGCGGCGGAGGGCGAAGGCCGGTGGCGCGAATACGTGGGCGGGTTCTCGGATTGGCAGATGCAATCGGCACGCTCGG
CGCAGATGGCGCAAGCCGCCAAGCCGGCCGCCGAAGAGAAGAAGCCCGAGATGGCCAAGCCGCGCGAGCGTGCCACGGTC
AAGCTCAGCTACAAAGAGCAGCGCGAACTCGACGCGCTGCCCGCCACTATCGAGGCGCTGGAGGCGGAGCAGAAGCAGGT
CGGCGGCGAACTGGAAGACGGCACGATCTACGGCCGCGACCCGGAGCGCGCGCAGAAGCTCGCCGAGCGCCACGAAGCCA
TCGAACTGGAGTTGCTGGAGGCGCTGGAGCGTTGGGAATCCCTCGAAGCCAAACGCGCCGGCACGGTGTGA

Upstream 100 bases:

>100_bases
CCGGCATCTGCAAGCGCAATGTCGCCGATGGGCGACGCGCGGGGCGACTACAATACGCGCCTTCCGGCCGTACGCGGCCA
GCACCCTTTTTCTCTCCAGC

Downstream 100 bases:

>100_bases
CGCTGCAGTAACCACGCAATATGTCAGCGGGATGTCGACCGAATATGGGTTTCGGGTCGCATCCCAACGCTGATGATCCC
TCCGCATTGTTGAGGACGGC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 636; Mature: 635

Protein sequence:

>636_residues
MALFSITDAQLAFGHVALLDHTDFSLEAGERVGLIGRNGTGKSSLLKIVAGTTSPDDGLIARQSGVTSAYVPQEPEFDPE
QTVAEAVAMGVPHAAGLLAEYEALITSMGDSHDEDALHRLQALQSQLEAADAWQLRTRVETTIAQLGLLPGARIGSLSGG
LTKRVALAQALVGAPDILLLDEPTNHLDYNSIRWLEDLLLAFRGSVLFITHDRAFLDRVATRIIELDRGKLRSYPGNFTA
YQTRKAQELDAEALENARFDKLLAQEEVWIRKGVEARRTRSVGRVARLEQMRVERQARREVQGNVKLEVSQGDRSGKIVA
ELIDVTKRYGDKTVVDNFTATIMRGDKVGILGANGVGKTTLLKLILGELAPDSGTVRNGTNLQVAYFDQMRAQLDLNRSL
ADTISPGSDWIEVNGQRKHVMSYLGDFLFPPERARSPVASLSGGERNRLLLARLFARPANVLVLDEPTNDLDIDTLELLE
ELLQEYSGTVFLVSHDRAFVDNVVTSVIAAEGEGRWREYVGGFSDWQMQSARSAQMAQAAKPAAEEKKPEMAKPRERATV
KLSYKEQRELDALPATIEALEAEQKQVGGELEDGTIYGRDPERAQKLAERHEAIELELLEALERWESLEAKRAGTV

Sequences:

>Translated_636_residues
MALFSITDAQLAFGHVALLDHTDFSLEAGERVGLIGRNGTGKSSLLKIVAGTTSPDDGLIARQSGVTSAYVPQEPEFDPE
QTVAEAVAMGVPHAAGLLAEYEALITSMGDSHDEDALHRLQALQSQLEAADAWQLRTRVETTIAQLGLLPGARIGSLSGG
LTKRVALAQALVGAPDILLLDEPTNHLDYNSIRWLEDLLLAFRGSVLFITHDRAFLDRVATRIIELDRGKLRSYPGNFTA
YQTRKAQELDAEALENARFDKLLAQEEVWIRKGVEARRTRSVGRVARLEQMRVERQARREVQGNVKLEVSQGDRSGKIVA
ELIDVTKRYGDKTVVDNFTATIMRGDKVGILGANGVGKTTLLKLILGELAPDSGTVRNGTNLQVAYFDQMRAQLDLNRSL
ADTISPGSDWIEVNGQRKHVMSYLGDFLFPPERARSPVASLSGGERNRLLLARLFARPANVLVLDEPTNDLDIDTLELLE
ELLQEYSGTVFLVSHDRAFVDNVVTSVIAAEGEGRWREYVGGFSDWQMQSARSAQMAQAAKPAAEEKKPEMAKPRERATV
KLSYKEQRELDALPATIEALEAEQKQVGGELEDGTIYGRDPERAQKLAERHEAIELELLEALERWESLEAKRAGTV
>Mature_635_residues
ALFSITDAQLAFGHVALLDHTDFSLEAGERVGLIGRNGTGKSSLLKIVAGTTSPDDGLIARQSGVTSAYVPQEPEFDPEQ
TVAEAVAMGVPHAAGLLAEYEALITSMGDSHDEDALHRLQALQSQLEAADAWQLRTRVETTIAQLGLLPGARIGSLSGGL
TKRVALAQALVGAPDILLLDEPTNHLDYNSIRWLEDLLLAFRGSVLFITHDRAFLDRVATRIIELDRGKLRSYPGNFTAY
QTRKAQELDAEALENARFDKLLAQEEVWIRKGVEARRTRSVGRVARLEQMRVERQARREVQGNVKLEVSQGDRSGKIVAE
LIDVTKRYGDKTVVDNFTATIMRGDKVGILGANGVGKTTLLKLILGELAPDSGTVRNGTNLQVAYFDQMRAQLDLNRSLA
DTISPGSDWIEVNGQRKHVMSYLGDFLFPPERARSPVASLSGGERNRLLLARLFARPANVLVLDEPTNDLDIDTLELLEE
LLQEYSGTVFLVSHDRAFVDNVVTSVIAAEGEGRWREYVGGFSDWQMQSARSAQMAQAAKPAAEEKKPEMAKPRERATVK
LSYKEQRELDALPATIEALEAEQKQVGGELEDGTIYGRDPERAQKLAERHEAIELELLEALERWESLEAKRAGTV

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=539, Percent_Identity=32.4675324675325, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI27881506, Length=524, Percent_Identity=30.7251908396947, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI10947137, Length=524, Percent_Identity=30.7251908396947, Blast_Score=192, Evalue=9e-49,
Organism=Homo sapiens, GI10947135, Length=530, Percent_Identity=30, Blast_Score=187, Evalue=3e-47,
Organism=Homo sapiens, GI69354671, Length=530, Percent_Identity=30, Blast_Score=187, Evalue=3e-47,
Organism=Escherichia coli, GI1787182, Length=634, Percent_Identity=48.2649842271293, Blast_Score=559, Evalue=1e-160,
Organism=Escherichia coli, GI2367384, Length=523, Percent_Identity=38.2409177820268, Blast_Score=343, Evalue=2e-95,
Organism=Escherichia coli, GI1787041, Length=525, Percent_Identity=31.6190476190476, Blast_Score=261, Evalue=8e-71,
Organism=Escherichia coli, GI1789751, Length=651, Percent_Identity=30.4147465437788, Blast_Score=258, Evalue=6e-70,
Organism=Escherichia coli, GI1788506, Length=548, Percent_Identity=23.3576642335766, Blast_Score=90, Evalue=6e-19,
Organism=Escherichia coli, GI1788165, Length=192, Percent_Identity=30.2083333333333, Blast_Score=86, Evalue=9e-18,
Organism=Escherichia coli, GI145693107, Length=564, Percent_Identity=21.6312056737589, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87081782, Length=492, Percent_Identity=24.5934959349593, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1787792, Length=531, Percent_Identity=24.2937853107345, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1786253, Length=216, Percent_Identity=31.9444444444444, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI1787164, Length=181, Percent_Identity=31.4917127071823, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786703, Length=225, Percent_Identity=31.5555555555556, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI48994883, Length=250, Percent_Identity=25.6, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI87081791, Length=197, Percent_Identity=28.9340101522843, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1787370, Length=226, Percent_Identity=25.6637168141593, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787712, Length=200, Percent_Identity=30, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1789891, Length=207, Percent_Identity=25.1207729468599, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI87081834, Length=207, Percent_Identity=28.0193236714976, Blast_Score=63, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=537, Percent_Identity=28.3054003724395, Blast_Score=209, Evalue=5e-54,
Organism=Caenorhabditis elegans, GI17553372, Length=510, Percent_Identity=31.1764705882353, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI17555318, Length=528, Percent_Identity=28.030303030303, Blast_Score=181, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6320874, Length=535, Percent_Identity=28.9719626168224, Blast_Score=190, Evalue=7e-49,
Organism=Saccharomyces cerevisiae, GI6321121, Length=549, Percent_Identity=29.143897996357, Blast_Score=187, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6325030, Length=394, Percent_Identity=29.9492385786802, Blast_Score=141, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6323278, Length=412, Percent_Identity=27.4271844660194, Blast_Score=120, Evalue=8e-28,
Organism=Saccharomyces cerevisiae, GI6324314, Length=416, Percent_Identity=27.8846153846154, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24666836, Length=536, Percent_Identity=30.7835820895522, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24642252, Length=552, Percent_Identity=30.4347826086957, Blast_Score=206, Evalue=5e-53,
Organism=Drosophila melanogaster, GI18859989, Length=552, Percent_Identity=30.4347826086957, Blast_Score=206, Evalue=5e-53,
Organism=Drosophila melanogaster, GI24641342, Length=525, Percent_Identity=29.1428571428571, Blast_Score=189, Evalue=6e-48,
Organism=Drosophila melanogaster, GI221500365, Length=313, Percent_Identity=28.1150159744409, Blast_Score=80, Evalue=6e-15,
Organism=Drosophila melanogaster, GI116007184, Length=313, Percent_Identity=28.1150159744409, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24659289, Length=219, Percent_Identity=26.027397260274, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 70049; Mature: 69918

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFSITDAQLAFGHVALLDHTDFSLEAGERVGLIGRNGTGKSSLLKIVAGTTSPDDGLI
CCEEEECCHHHHHCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHEECCCCCCCCEE
ARQSGVTSAYVPQEPEFDPEQTVAEAVAMGVPHAAGLLAEYEALITSMGDSHDEDALHRL
EECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
QALQSQLEAADAWQLRTRVETTIAQLGLLPGARIGSLSGGLTKRVALAQALVGAPDILLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE
DEPTNHLDYNSIRWLEDLLLAFRGSVLFITHDRAFLDRVATRIIELDRGKLRSYPGNFTA
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCHHHCCCCCCCE
YQTRKAQELDAEALENARFDKLLAQEEVWIRKGVEARRTRSVGRVARLEQMRVERQARRE
ECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VQGNVKLEVSQGDRSGKIVAELIDVTKRYGDKTVVDNFTATIMRGDKVGILGANGVGKTT
HCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHCCHHEEEEECCEEEEEECCCCCHHH
LLKLILGELAPDSGTVRNGTNLQVAYFDQMRAQLDLNRSLADTISPGSDWIEVNGQRKHV
HHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHCCCCCCEEEECCCHHHH
MSYLGDFLFPPERARSPVASLSGGERNRLLLARLFARPANVLVLDEPTNDLDIDTLELLE
HHHHHHHCCCCHHHCCCHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHH
ELLQEYSGTVFLVSHDRAFVDNVVTSVIAAEGEGRWREYVGGFSDWQMQSARSAQMAQAA
HHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
KPAAEEKKPEMAKPRERATVKLSYKEQRELDALPATIEALEAEQKQVGGELEDGTIYGRD
CCCHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC
PERAQKLAERHEAIELELLEALERWESLEAKRAGTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALFSITDAQLAFGHVALLDHTDFSLEAGERVGLIGRNGTGKSSLLKIVAGTTSPDDGLI
CEEEECCHHHHHCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHEECCCCCCCCEE
ARQSGVTSAYVPQEPEFDPEQTVAEAVAMGVPHAAGLLAEYEALITSMGDSHDEDALHRL
EECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
QALQSQLEAADAWQLRTRVETTIAQLGLLPGARIGSLSGGLTKRVALAQALVGAPDILLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE
DEPTNHLDYNSIRWLEDLLLAFRGSVLFITHDRAFLDRVATRIIELDRGKLRSYPGNFTA
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCHHHCCCCCCCE
YQTRKAQELDAEALENARFDKLLAQEEVWIRKGVEARRTRSVGRVARLEQMRVERQARRE
ECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VQGNVKLEVSQGDRSGKIVAELIDVTKRYGDKTVVDNFTATIMRGDKVGILGANGVGKTT
HCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHCCHHEEEEECCEEEEEECCCCCHHH
LLKLILGELAPDSGTVRNGTNLQVAYFDQMRAQLDLNRSLADTISPGSDWIEVNGQRKHV
HHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHCCCCCCEEEECCCHHHH
MSYLGDFLFPPERARSPVASLSGGERNRLLLARLFARPANVLVLDEPTNDLDIDTLELLE
HHHHHHHCCCCHHHCCCHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHH
ELLQEYSGTVFLVSHDRAFVDNVVTSVIAAEGEGRWREYVGGFSDWQMQSARSAQMAQAA
HHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
KPAAEEKKPEMAKPRERATVKLSYKEQRELDALPATIEALEAEQKQVGGELEDGTIYGRD
CCCHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC
PERAQKLAERHEAIELELLEALERWESLEAKRAGTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Endonuclease; Excision [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]