| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is gltI [H]
Identifier: 187927921
GI number: 187927921
Start: 870296
End: 871204
Strand: Reverse
Name: gltI [H]
Synonym: Rpic_0826
Alternate gene names: 187927921
Gene position: 871204-870296 (Counterclockwise)
Preceding gene: 187927922
Following gene: 187927918
Centisome position: 22.1
GC content: 62.49
Gene sequence:
>909_bases ATGCCGTTCTTCACGCGCGCGCTGCCGGCTGCAGCGCTGCTCTTCGCTTCGCTGTCCAGTTTGCCGGGCCCTGTCCTGGC CTCCTCCACGCCGGTGCTCGACCGCATCCGCGACACCGGCACCGTCCGCGTCGCCTACCGCGAAAGCTCCGTGCCCTTCT CGTTCTACGACGCCGATAAAAAGCCCGTCGGCTATGCCGTCGATCTGTGCCTGCGCGTGGTCGACAAGCTGCGCACGGAC CTCAAGCGGCCCGATCTGAAAGTGCAATATGTGCTGGTCACGCCCTCGACGCGGATGCCGGCCATCGCCGATGGCAAAGC CGACCTCGAATGCGGCTCGACCACCAACAACCGCGAACGCCGCGAGAAAGTGGCCTTCACGATTCCGCACTACATCGCGG GCATCCGCATGATCGTCAAGACGTCGTCGGGCATCCGCAGGTGGGATGACCTGCGCGGCAAGACCGTCGTCACCACCAAA GGCACCACCAGCGTGGCGGAGCTGCGCAAGATGAACGACGTGCGCGTGCTGAACATGAACTTCCTCGAAGCCAAGGACCA CGCTGAATCCTTCGCGATGGTCGAAACCGGCAAGGCCGACGCTTTTGCAATGGACGACGTGCTGCTCTACGGCTTCCGCG CCAACACCAAGACCCCGGGCGACTACGCCGTCGTCGGTGACATGCTGACGGTCGAGCCCTACGCGATCATGCTGAGCAAG GACGACACCGAGTTCAAGCGCTTGGTTGATCGCGCGATGACCAACATCATCCTCGACTACGACGCCGAGAAGCTCTACAA GAAGTGGTTCCAGCAACCGATTCCGCCGCACAGCGCAAAGCTCGATATCCCGATGAGCTTCCTGCTGCGCGACTCGTTCA AGTACCCGAGCGACAAAGTCGCCGATTGA
Upstream 100 bases:
>100_bases GCAGCTTGCTGCGGCGGGCCGTATCATGCGGCAGGCCCTCCGGCCACGAGCCGGGCATAACGATAAAGAGGGCCGCCGAT TCTTTCCGGGGGATACAACC
Downstream 100 bases:
>100_bases ACAAAGCCGCACGCAGCATGAGCGCCGCCGTCACGCACGGCGGTGTTTTTGTTTGTGCATGACACAAACGGAAATAGGCT TTAAAGGAAGTGTTTGACGA
Product: family 3 extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MPFFTRALPAAALLFASLSSLPGPVLASSTPVLDRIRDTGTVRVAYRESSVPFSFYDADKKPVGYAVDLCLRVVDKLRTD LKRPDLKVQYVLVTPSTRMPAIADGKADLECGSTTNNRERREKVAFTIPHYIAGIRMIVKTSSGIRRWDDLRGKTVVTTK GTTSVAELRKMNDVRVLNMNFLEAKDHAESFAMVETGKADAFAMDDVLLYGFRANTKTPGDYAVVGDMLTVEPYAIMLSK DDTEFKRLVDRAMTNIILDYDAEKLYKKWFQQPIPPHSAKLDIPMSFLLRDSFKYPSDKVAD
Sequences:
>Translated_302_residues MPFFTRALPAAALLFASLSSLPGPVLASSTPVLDRIRDTGTVRVAYRESSVPFSFYDADKKPVGYAVDLCLRVVDKLRTD LKRPDLKVQYVLVTPSTRMPAIADGKADLECGSTTNNRERREKVAFTIPHYIAGIRMIVKTSSGIRRWDDLRGKTVVTTK GTTSVAELRKMNDVRVLNMNFLEAKDHAESFAMVETGKADAFAMDDVLLYGFRANTKTPGDYAVVGDMLTVEPYAIMLSK DDTEFKRLVDRAMTNIILDYDAEKLYKKWFQQPIPPHSAKLDIPMSFLLRDSFKYPSDKVAD >Mature_301_residues PFFTRALPAAALLFASLSSLPGPVLASSTPVLDRIRDTGTVRVAYRESSVPFSFYDADKKPVGYAVDLCLRVVDKLRTDL KRPDLKVQYVLVTPSTRMPAIADGKADLECGSTTNNRERREKVAFTIPHYIAGIRMIVKTSSGIRRWDDLRGKTVVTTKG TTSVAELRKMNDVRVLNMNFLEAKDHAESFAMVETGKADAFAMDDVLLYGFRANTKTPGDYAVVGDMLTVEPYAIMLSKD DTEFKRLVDRAMTNIILDYDAEKLYKKWFQQPIPPHSAKLDIPMSFLLRDSFKYPSDKVAD
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=267, Percent_Identity=41.5730337078652, Blast_Score=236, Evalue=1e-63, Organism=Escherichia coli, GI1787031, Length=231, Percent_Identity=29.4372294372294, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1788228, Length=241, Percent_Identity=24.4813278008299, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 33851; Mature: 33720
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFFTRALPAAALLFASLSSLPGPVLASSTPVLDRIRDTGTVRVAYRESSVPFSFYDADK CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCEEEECCCC KPVGYAVDLCLRVVDKLRTDLKRPDLKVQYVLVTPSTRMPAIADGKADLECGSTTNNRER CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCCCCHHH REKVAFTIPHYIAGIRMIVKTSSGIRRWDDLRGKTVVTTKGTTSVAELRKMNDVRVLNMN HHHHEEECHHHHHHHHHEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHCCCEEEEECC FLEAKDHAESFAMVETGKADAFAMDDVLLYGFRANTKTPGDYAVVGDMLTVEPYAIMLSK HHHHHHHHHHEEEEECCCCCCEECCCEEEEEEECCCCCCCCEEEECCEEEECCEEEEEEC DDTEFKRLVDRAMTNIILDYDAEKLYKKWFQQPIPPHSAKLDIPMSFLLRDSFKYPSDKV CCHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCCCCC AD CC >Mature Secondary Structure PFFTRALPAAALLFASLSSLPGPVLASSTPVLDRIRDTGTVRVAYRESSVPFSFYDADK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCEEEECCCC KPVGYAVDLCLRVVDKLRTDLKRPDLKVQYVLVTPSTRMPAIADGKADLECGSTTNNRER CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCCCCHHH REKVAFTIPHYIAGIRMIVKTSSGIRRWDDLRGKTVVTTKGTTSVAELRKMNDVRVLNMN HHHHEEECHHHHHHHHHEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHCCCEEEEECC FLEAKDHAESFAMVETGKADAFAMDDVLLYGFRANTKTPGDYAVVGDMLTVEPYAIMLSK HHHHHHHHHHEEEEECCCCCCEECCCEEEEEEECCCCCCCCEEEECCEEEECCEEEEEEC DDTEFKRLVDRAMTNIILDYDAEKLYKKWFQQPIPPHSAKLDIPMSFLLRDSFKYPSDKV CCHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCCCCC AD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]