Click here to switch to the map view.

The map label for this gene is ybbN [C]

Identifier: 187927819

GI number: 187927819

Start: 759387

End: 759710

Strand: Reverse

Name: ybbN [C]

Synonym: Rpic_0723

Alternate gene names: 187927819

Gene position: 759710-759387 (Counterclockwise)

Preceding gene: 187927820

Following gene: 187927817

Centisome position: 19.27

GC content: 62.04

Gene sequence:

>324_bases
ATGAAGACCGTCAACGATGCCTCGTTTCAATCCGATGTGATCGACGCCTCGCAACGCAACCCGGTGGTGGTGTGCTTTGC
CGCGGAGTGGAGCCACCCGAGCCAGTCCGCCGTGGCCAGCCTCGAGCAGATGGAATCGAGCTACGCCGGACGTGCCACCT
TCGTCACGATGGACTTCGACGAAAACCAGCACACCGCCGATCGATACGGCGTCTCGGTCATGCCCGGTTTTGTGGTCTTT
GCCAACAGCCAGCCGCGAGACGGGTGGTCGGGCGTGTACGCCGACACCATCCGCGAGAAGCTGGATCAGGTCATCCCGCG
ATAA

Upstream 100 bases:

>100_bases
TGAACACAGGTTGTCGACCGGCGGTCCGCTGCCTAGAGTCAGAGTGGCCCTGCCCGCAGGCCTTCGTTGCGCGGGCGTCC
ACTCCACTCTGGGAGCGCCC

Downstream 100 bases:

>100_bases
GGCAGCACGCCGTCACACACCGGCGATCGCGCGCAGCGCCGTTGACGCGGCCACCATTCCGAACACCGCCGTCACGCATA
CGGACGAACCGAACCCCGCG

Product: Thioredoxin domain

Products: NA

Alternate protein names: Thioredoxin Domain-Containing Protein; Thioredoxin Domain Protein

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MKTVNDASFQSDVIDASQRNPVVVCFAAEWSHPSQSAVASLEQMESSYAGRATFVTMDFDENQHTADRYGVSVMPGFVVF
ANSQPRDGWSGVYADTIREKLDQVIPR

Sequences:

>Translated_107_residues
MKTVNDASFQSDVIDASQRNPVVVCFAAEWSHPSQSAVASLEQMESSYAGRATFVTMDFDENQHTADRYGVSVMPGFVVF
ANSQPRDGWSGVYADTIREKLDQVIPR
>Mature_107_residues
MKTVNDASFQSDVIDASQRNPVVVCFAAEWSHPSQSAVASLEQMESSYAGRATFVTMDFDENQHTADRYGVSVMPGFVVF
ANSQPRDGWSGVYADTIREKLDQVIPR

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11851; Mature: 11851

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVNDASFQSDVIDASQRNPVVVCFAAEWSHPSQSAVASLEQMESSYAGRATFVTMDFD
CCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECC
ENQHTADRYGVSVMPGFVVFANSQPRDGWSGVYADTIREKLDQVIPR
CCCCCHHHCCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTVNDASFQSDVIDASQRNPVVVCFAAEWSHPSQSAVASLEQMESSYAGRATFVTMDFD
CCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECC
ENQHTADRYGVSVMPGFVVFANSQPRDGWSGVYADTIREKLDQVIPR
CCCCCHHHCCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA