| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927811
Identifier: 187927811
GI number: 187927811
Start: 749342
End: 750427
Strand: Reverse
Name: 187927811
Synonym: Rpic_0715
Alternate gene names: NA
Gene position: 750427-749342 (Counterclockwise)
Preceding gene: 187927812
Following gene: 187927809
Centisome position: 19.03
GC content: 65.84
Gene sequence:
>1086_bases TTGACCGACAGCTCCCCCATCGACGATCTGTTCGGCGCGCCACTCGCACCCAGCGACAACGCGACCGCCGAACCCGGCAC ATCCGCTCCGAAACCCAAACGCTCGCCCGCCCGACAGGGTGTGCAGCCGGCCGTGGTTGCGCCCGATGTGGCTGCGCTAG CGCAGCGCTTGCCGCGCGATCTGCGCATCGGCACGTCGTCGTGGTCGTATCCGGGGTGGGACGGGCTGGTGTATGCGGGC GAGTACTCCGATTCGATGCTCGCACGCAAAGGCCTGGCGGCTTATGCCCAGCACCCTTTGCTGCGCACGGTCAGTATCGA TCGCGGGTTCTATTCGCCAATCCCGCTGGCGGACTACGTCGCCTACGCGGCCAGCGTGCCGGAAGACTTCCGCTTTGCAG TCAAGGCAACCTCTGCCGTATGCGACGCATGGATTCGTGAATCGGACGGGCGCGGGCGCATGGCCAATCCTGCCTTCCTG AATCCTGAATTTGCGATCCGCGACTTTGTTGAGCCGGCCACCCGCGGGCTCGGGACGCGATGCGGGCCGCTCGTGTTTCA GCTTTCGCCGCTGGGCGCGCTGGCTGAAGATGCCACCGGCTTTGTGGAACGGCTTGCGGCGTTCCTGACCGCGCTGCCGC CACTCGATCCGCAACGCAATCCCGATGCCGTCTACACGGTGGAATTGCGCGACGCCACGCTGCTCACGCCGCGCTTCATC AAGATGCTGCGCGCGGCGGGGGTGCGTTATTGCGTCGGCCTGCATGAGCGGATGCCGGCAGTGGACCGGCAAGCGGCAGC CGTTGCATTGCTGGATGAAGGCGCAGGCGGCCCGCTGGTGGTGCGCTGGAACCTGAACAGCCGCTATCGCTACGCGCAAG CCGAAGCAGCGTACAAACCGTTCAACAAGCTCGTCGATGAAGACCCGTTCTCGCGGGAGACGTTGGCCGACATGGCGGTC GCCGCGCTGGCGGCTGGGCGCAAGGTAACGATCCTGGTCAGCAACAAGGCAGAAGGATCATCCCCGTTGTCGTGCATCAA GCTGGCCGAGGCCATTGCCGCGCGCTTGCCGGCAGACGCAGCGTAG
Upstream 100 bases:
>100_bases GACGCCGACGAAATCTCGATCTTCCAGACCGTGCTGCAGAAGGCCGGCAAGTCGGCGACGACGATCCCGTGGTCGCGCCG CTATATCTACGCGTAACCAT
Downstream 100 bases:
>100_bases CCTCGGCGCCCTCTTCTAGCCCTGCAAGCGGTGTGCGAACTGCTTGCGGAATTTCGCCACCTTGGGCGAGATGACGAACG CGCAGTAGCCCTGGGCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTDSSPIDDLFGAPLAPSDNATAEPGTSAPKPKRSPARQGVQPAVVAPDVAALAQRLPRDLRIGTSSWSYPGWDGLVYAG EYSDSMLARKGLAAYAQHPLLRTVSIDRGFYSPIPLADYVAYAASVPEDFRFAVKATSAVCDAWIRESDGRGRMANPAFL NPEFAIRDFVEPATRGLGTRCGPLVFQLSPLGALAEDATGFVERLAAFLTALPPLDPQRNPDAVYTVELRDATLLTPRFI KMLRAAGVRYCVGLHERMPAVDRQAAAVALLDEGAGGPLVVRWNLNSRYRYAQAEAAYKPFNKLVDEDPFSRETLADMAV AALAAGRKVTILVSNKAEGSSPLSCIKLAEAIAARLPADAA
Sequences:
>Translated_361_residues MTDSSPIDDLFGAPLAPSDNATAEPGTSAPKPKRSPARQGVQPAVVAPDVAALAQRLPRDLRIGTSSWSYPGWDGLVYAG EYSDSMLARKGLAAYAQHPLLRTVSIDRGFYSPIPLADYVAYAASVPEDFRFAVKATSAVCDAWIRESDGRGRMANPAFL NPEFAIRDFVEPATRGLGTRCGPLVFQLSPLGALAEDATGFVERLAAFLTALPPLDPQRNPDAVYTVELRDATLLTPRFI KMLRAAGVRYCVGLHERMPAVDRQAAAVALLDEGAGGPLVVRWNLNSRYRYAQAEAAYKPFNKLVDEDPFSRETLADMAV AALAAGRKVTILVSNKAEGSSPLSCIKLAEAIAARLPADAA >Mature_360_residues TDSSPIDDLFGAPLAPSDNATAEPGTSAPKPKRSPARQGVQPAVVAPDVAALAQRLPRDLRIGTSSWSYPGWDGLVYAGE YSDSMLARKGLAAYAQHPLLRTVSIDRGFYSPIPLADYVAYAASVPEDFRFAVKATSAVCDAWIRESDGRGRMANPAFLN PEFAIRDFVEPATRGLGTRCGPLVFQLSPLGALAEDATGFVERLAAFLTALPPLDPQRNPDAVYTVELRDATLLTPRFIK MLRAAGVRYCVGLHERMPAVDRQAAAVALLDEGAGGPLVVRWNLNSRYRYAQAEAAYKPFNKLVDEDPFSRETLADMAVA ALAAGRKVTILVSNKAEGSSPLSCIKLAEAIAARLPADAA
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38644; Mature: 38513
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSSPIDDLFGAPLAPSDNATAEPGTSAPKPKRSPARQGVQPAVVAPDVAALAQRLPRD CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEECCCHHHHHHHCCHH LRIGTSSWSYPGWDGLVYAGEYSDSMLARKGLAAYAQHPLLRTVSIDRGFYSPIPLADYV HEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH AYAASVPEDFRFAVKATSAVCDAWIRESDGRGRMANPAFLNPEFAIRDFVEPATRGLGTR HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC CGPLVFQLSPLGALAEDATGFVERLAAFLTALPPLDPQRNPDAVYTVELRDATLLTPRFI CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEECCHHHH KMLRAAGVRYCVGLHERMPAVDRQAAAVALLDEGAGGPLVVRWNLNSRYRYAQAEAAYKP HHHHHCCHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCEEEEECCCCCEEHHHHHHHHHH FNKLVDEDPFSRETLADMAVAALAAGRKVTILVSNKAEGSSPLSCIKLAEAIAARLPADA HHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC A C >Mature Secondary Structure TDSSPIDDLFGAPLAPSDNATAEPGTSAPKPKRSPARQGVQPAVVAPDVAALAQRLPRD CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEECCCHHHHHHHCCHH LRIGTSSWSYPGWDGLVYAGEYSDSMLARKGLAAYAQHPLLRTVSIDRGFYSPIPLADYV HEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH AYAASVPEDFRFAVKATSAVCDAWIRESDGRGRMANPAFLNPEFAIRDFVEPATRGLGTR HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC CGPLVFQLSPLGALAEDATGFVERLAAFLTALPPLDPQRNPDAVYTVELRDATLLTPRFI CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEECCHHHH KMLRAAGVRYCVGLHERMPAVDRQAAAVALLDEGAGGPLVVRWNLNSRYRYAQAEAAYKP HHHHHCCHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCEEEEECCCCCEEHHHHHHHHHH FNKLVDEDPFSRETLADMAVAALAAGRKVTILVSNKAEGSSPLSCIKLAEAIAARLPADA HHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA