| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is msrA [H]
Identifier: 187927810
GI number: 187927810
Start: 748766
End: 749326
Strand: Direct
Name: msrA [H]
Synonym: Rpic_0714
Alternate gene names: 187927810
Gene position: 748766-749326 (Clockwise)
Preceding gene: 187927808
Following gene: 187927814
Centisome position: 18.99
GC content: 61.68
Gene sequence:
>561_bases ATGACTGAACAACGCGCCCTTGAAACCGCCGTCCTGGGTGGAGGCTGCTTCTGGTGCCTTGAAGCGGTGTTCCAGCAGGT GCAAGGCGTGCACAGCGTGGTGTCCGGCTATGCCGGCGGCCATGTCGATCGCCCGAGTTACCGTGCCGTTTGCAATGGCA ACACTGGTCATGCCGAAGTGGTGGCCGTGAAGTTCGACCCGGCTGTGATCCCATATCGCGAGATTCTCGACATCTTCTTC GCCATTCACGACCCGACCACCGTAGATCGCCAGGGCAACGATGTCGGCCCGCAATACCGTTCGGCTATCTTTGCGCAAAC GCCCGAGCAATTGGCGACGGCGCGCACGGCCATTGCCGAACTCGGCGCCAGCGATATTTTTGAAGCGCCCATCGTGACGG AACTGGTGGATGCCGCTGACGGCAAGGTGACCTTCTGGCGGGCGGAAGACGAGCACCAGAACTACTTCCGCGACCACCCG GCCCAGGGCTACTGCGCGTTCGTCATCTCGCCCAAGGTGGCGAAATTCCGCAAGCAGTTCGCACACCGCTTGCAGGGCTA G
Upstream 100 bases:
>100_bases TAGGGCTTTGCGTGATTCTGCGGCCACATGGTGGTGCCTGTGTCAGGATTGAAGCCTTCGGCCGACCAATGGCAGCCCAA TCAATTGCAGGAGAATCCGA
Downstream 100 bases:
>100_bases AAGAGGGCGCCGAGGCTACGCTGCGTCTGCCGGCAAGCGCGCGGCAATGGCCTCGGCCAGCTTGATGCACGACAACGGGG ATGATCCTTCTGCCTTGTTG
Product: methionine sulfoxide reductase A
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTEQRALETAVLGGGCFWCLEAVFQQVQGVHSVVSGYAGGHVDRPSYRAVCNGNTGHAEVVAVKFDPAVIPYREILDIFF AIHDPTTVDRQGNDVGPQYRSAIFAQTPEQLATARTAIAELGASDIFEAPIVTELVDAADGKVTFWRAEDEHQNYFRDHP AQGYCAFVISPKVAKFRKQFAHRLQG
Sequences:
>Translated_186_residues MTEQRALETAVLGGGCFWCLEAVFQQVQGVHSVVSGYAGGHVDRPSYRAVCNGNTGHAEVVAVKFDPAVIPYREILDIFF AIHDPTTVDRQGNDVGPQYRSAIFAQTPEQLATARTAIAELGASDIFEAPIVTELVDAADGKVTFWRAEDEHQNYFRDHP AQGYCAFVISPKVAKFRKQFAHRLQG >Mature_185_residues TEQRALETAVLGGGCFWCLEAVFQQVQGVHSVVSGYAGGHVDRPSYRAVCNGNTGHAEVVAVKFDPAVIPYREILDIFFA IHDPTTVDRQGNDVGPQYRSAIFAQTPEQLATARTAIAELGASDIFEAPIVTELVDAADGKVTFWRAEDEHQNYFRDHPA QGYCAFVISPKVAKFRKQFAHRLQG
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=162, Percent_Identity=40.7407407407407, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI208609995, Length=165, Percent_Identity=40, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI208609993, Length=115, Percent_Identity=40, Blast_Score=82, Evalue=3e-16, Organism=Escherichia coli, GI1790665, Length=159, Percent_Identity=45.9119496855346, Blast_Score=144, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6320881, Length=162, Percent_Identity=37.037037037037, Blast_Score=93, Evalue=3e-20, Organism=Drosophila melanogaster, GI24664627, Length=170, Percent_Identity=32.3529411764706, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI45553131, Length=166, Percent_Identity=31.9277108433735, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24664631, Length=170, Percent_Identity=31.1764705882353, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 20455; Mature: 20324
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQRALETAVLGGGCFWCLEAVFQQVQGVHSVVSGYAGGHVDRPSYRAVCNGNTGHAEV CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEE VAVKFDPAVIPYREILDIFFAIHDPTTVDRQGNDVGPQYRSAIFAQTPEQLATARTAIAE EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH LGASDIFEAPIVTELVDAADGKVTFWRAEDEHQNYFRDHPAQGYCAFVISPKVAKFRKQF HCHHHHHCCHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHH AHRLQG HHHHCC >Mature Secondary Structure TEQRALETAVLGGGCFWCLEAVFQQVQGVHSVVSGYAGGHVDRPSYRAVCNGNTGHAEV CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEE VAVKFDPAVIPYREILDIFFAIHDPTTVDRQGNDVGPQYRSAIFAQTPEQLATARTAIAE EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH LGASDIFEAPIVTELVDAADGKVTFWRAEDEHQNYFRDHPAQGYCAFVISPKVAKFRKQF HCHHHHHCCHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHH AHRLQG HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]