Click here to switch to the map view.

The map label for this gene is 187927798

Identifier: 187927798

GI number: 187927798

Start: 738378

End: 738755

Strand: Reverse

Name: 187927798

Synonym: Rpic_0702

Alternate gene names: NA

Gene position: 738755-738378 (Counterclockwise)

Preceding gene: 187927799

Following gene: 187927797

Centisome position: 18.74

GC content: 64.02

Gene sequence:

>378_bases
ATGACCGACGACACCAGCCCCAAGCTGTTCGCTTCCTTGAAGAAACTGGCCGGCACGGTCGTCTCGATGCTGCAGACGCG
GCTCGAGCTGGCGAGCGTCGAGCTGGCTGAAGAAAAAGAACGGCTGCTCGGCACCGCCTTCCTGGGCATGTTGGCCGTGA
GCCTGATCGCCCTGTCCATCATGACGCTGACGGCGCTGGTGGTCATCCTGTGCTGGGATACGTATCGCTGGCAGTCCCTG
GCCGTGATGGCAGCGCTGTATGCGCTGGGCGCTGCAGCGTGCCTGTGGAAGGTGCGTTCGCTGCTGCGCGACGCACCGCC
ACTGTTCGAGGCCACGCTGGCCGAACTAGACAAAGACCGGGAGATCCTGCGCCGATGA

Upstream 100 bases:

>100_bases
ATCGCGCCATCGGCCAGTTGCATTTTCGCGGTTCTATTCCGGGCATGGCGCGTGCTGTGTTGGCACTGGCGCCATCCGCC
TCGCACCCTTTCCACTCCTC

Downstream 100 bases:

>100_bases
CTGATCCGACCGAACACGCGCCGTCACCGGGCACATCCGTGAACGAACCCGCATCGAGCGCGCGGCACCATGTGCGGCCG
TCACGCCGCGGCGCCGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTDDTSPKLFASLKKLAGTVVSMLQTRLELASVELAEEKERLLGTAFLGMLAVSLIALSIMTLTALVVILCWDTYRWQSL
AVMAALYALGAAACLWKVRSLLRDAPPLFEATLAELDKDREILRR

Sequences:

>Translated_125_residues
MTDDTSPKLFASLKKLAGTVVSMLQTRLELASVELAEEKERLLGTAFLGMLAVSLIALSIMTLTALVVILCWDTYRWQSL
AVMAALYALGAAACLWKVRSLLRDAPPLFEATLAELDKDREILRR
>Mature_124_residues
TDDTSPKLFASLKKLAGTVVSMLQTRLELASVELAEEKERLLGTAFLGMLAVSLIALSIMTLTALVVILCWDTYRWQSLA
VMAALYALGAAACLWKVRSLLRDAPPLFEATLAELDKDREILRR

Specific function: Unknown

COG id: COG5393

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13799; Mature: 13667

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDTSPKLFASLKKLAGTVVSMLQTRLELASVELAEEKERLLGTAFLGMLAVSLIALSI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTLTALVVILCWDTYRWQSLAVMAALYALGAAACLWKVRSLLRDAPPLFEATLAELDKDR
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EILRR
HHHCC
>Mature Secondary Structure 
TDDTSPKLFASLKKLAGTVVSMLQTRLELASVELAEEKERLLGTAFLGMLAVSLIALSI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTLTALVVILCWDTYRWQSLAVMAALYALGAAACLWKVRSLLRDAPPLFEATLAELDKDR
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EILRR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA