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The map label for this gene is shp [H]

Identifier: 187927668

GI number: 187927668

Start: 606387

End: 606803

Strand: Direct

Name: shp [H]

Synonym: Rpic_0572

Alternate gene names: 187927668

Gene position: 606387-606803 (Clockwise)

Preceding gene: 187927667

Following gene: 187927669

Centisome position: 15.38

GC content: 62.11

Gene sequence:

>417_bases
ATGCCAATCTCAAAGTTTCCTCCTGTTGCCTGCCTGCATTCGGTCTTGGCGTTAGCGCTAGCCGCTGCCGCTCCCCTGGC
ACATGCGCAAGCGCCCGCGCAACTGCTTGATCAATATCGAGCGCAGGCCGGAGCCCCCTCCGACCCGTCCCGCGGCCAGG
AATTTTTTACATCCAAGCATGGCCGTGAATGGAGCTGTGCGTCTTGCCATGGGAACCCGCCCACGCAGACCGGCCGGCAT
GCCGCAACTGGCAAGTCGATCGCGCCGCTGGCTCCGGCATTCAATCCTGAGCGCTTTACCGATGCCGCCAAGACGGAGAA
ATGGTTTCGGCGCAACTGCAACGACGTGGTCGGGCGCGAGTGCACGGTGGCCGAAAAAGCAGACGTGCTGAGTTGGCTGA
TGACCCTCGGGAAGTAG

Upstream 100 bases:

>100_bases
CCTTGACCGGGCCACTGAAATAGATCCCCGCGGTATCGCTTAAGAATCCGTTAAGAAGAATTCGAGAGCATTAAGGCATT
CCTCAGTGCGAGAGGCCGCG

Downstream 100 bases:

>100_bases
GGCCATCCAGCAACCCGTTCAATTCCTGACCTGATGCGGAGTATCCAAATGTCTGGCCGTTTCGTTGTTACAGGCCGAGC
TGCACGCGCTTGCCTGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Oxygen-binding heme protein; Sphaeroides heme protein [H]

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MPISKFPPVACLHSVLALALAAAAPLAHAQAPAQLLDQYRAQAGAPSDPSRGQEFFTSKHGREWSCASCHGNPPTQTGRH
AATGKSIAPLAPAFNPERFTDAAKTEKWFRRNCNDVVGRECTVAEKADVLSWLMTLGK

Sequences:

>Translated_138_residues
MPISKFPPVACLHSVLALALAAAAPLAHAQAPAQLLDQYRAQAGAPSDPSRGQEFFTSKHGREWSCASCHGNPPTQTGRH
AATGKSIAPLAPAFNPERFTDAAKTEKWFRRNCNDVVGRECTVAEKADVLSWLMTLGK
>Mature_137_residues
PISKFPPVACLHSVLALALAAAAPLAHAQAPAQLLDQYRAQAGAPSDPSRGQEFFTSKHGREWSCASCHGNPPTQTGRHA
ATGKSIAPLAPAFNPERFTDAAKTEKWFRRNCNDVVGRECTVAEKADVLSWLMTLGK

Specific function: High-spin cytochrome. Transiently bind oxygen during autoxidation, which occurs with a half-life of 3 min with a 4-fold excess of O(2). Also binds carbon monoxide, azide and cyanide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR015170 [H]

Pfam domain/function: PF09086 DUF1924 [H]

EC number: NA

Molecular weight: Translated: 14795; Mature: 14664

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISKFPPVACLHSVLALALAAAAPLAHAQAPAQLLDQYRAQAGAPSDPSRGQEFFTSKH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
GREWSCASCHGNPPTQTGRHAATGKSIAPLAPAFNPERFTDAAKTEKWFRRNCNDVVGRE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCC
CTVAEKADVLSWLMTLGK
CCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PISKFPPVACLHSVLALALAAAAPLAHAQAPAQLLDQYRAQAGAPSDPSRGQEFFTSKH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
GREWSCASCHGNPPTQTGRHAATGKSIAPLAPAFNPERFTDAAKTEKWFRRNCNDVVGRE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCC
CTVAEKADVLSWLMTLGK
CCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9558336; 10821858 [H]