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The map label for this gene is 187927622

Identifier: 187927622

GI number: 187927622

Start: 558979

End: 561162

Strand: Direct

Name: 187927622

Synonym: Rpic_0522

Alternate gene names: NA

Gene position: 558979-561162 (Clockwise)

Preceding gene: 187927621

Following gene: 187927625

Centisome position: 14.18

GC content: 63.97

Gene sequence:

>2184_bases
ATGATTCCGTTCCAGCCCAGCAAGCTGGTGATGGCGCTTGCCGCCGTCCTGCCGTCCGTCGCCTCGGTTTCCGCCCTGGC
TCAGGAGGCCACGCCGCCGGCCGCCGCTCCTTCCACGCCCACCACGACGGCACCCGCCACCAACGTGCGCGACCTCAGCG
AAACCCGCGTCACGGCCAAGCGCTTGGACGCCGCACGCAATGCGCTGTCGCCGGACACCGGCAGCTCCGTCTACAAGTTC
GACACCGATGACATCGCCCGCCTGCCGCTGGGCGATGCCACGCCGCTCAACCAAGTGCTGCTGCAGGCGCCGGGTGTGGT
GCAGGATTCGTACGGTCAGTTGCACGTGCGCGGGGACCACTCCAACCTGCAGTACCGCATCAATGGCGTGATCGTGCCTG
AGCCGATTAGCGGTTTCGGGCAGATGCTCGATACACGCTTCGCCAACCAGATCAACGTGTTGACCGGCGCACTGCCCGCG
CAGTACGGTTACCGCACCGCCGGCATCGTCGACATCACCACCAAAGGCGCATCGACCGATGAGGATGGCGAGCCGAAGGC
CTTTGGCGGCGAGATCGGCACGGTGCTCGGCAGCAATGCCACGCACGAGGTCAATGCGCAGATCCAGGGCACGAAAGACC
GCTTCAGCTATTACCTGTCGGGCGTGTTTGCCGAGAACAACCTCGGCATTGAAAACCCCACCGGCAACCGCAACGCCACG
CACGACCACACCACGCAAAACAAGTCGTTCGGCATGCTGTCGTACCTGCTCGACAACGACAGCCGCGTGAGCTTCATGTT
CGGCACATCGAACGGCCGTTTCCAGATTCCGACGCGACCGGGCCTGACGCCGAAATTCACGCTCGATGGCGCGGTGCCGC
CGGCGTCGGAAGCCCTCAACGCCAATCAGCGTGAGAAGACCGACTTCCAGATTCTGACGTATCAGCAGAAGGTGTCGCCC
AAGCTCGACTACCAGGTGTCGGTCTTCCGCCGTGTCAGCCGCATCGATTACATGCCCGATCCGATCGGTGATCTCGTCTA
CAACGGCGTGGCCGCCGACATTACCCGCCGCAACGAGGCTTACGGCGTGCAGGGCGATGCGAGCTACAAGCTGACCGACA
AGCACACGCTGCGTGCCGGTGTGTTCGTTCAGCGCGAGCGCTACGTGGCCAACAACACCGCCAGCGTGTTTGCCGCCGAC
GACTCCGGTGCGCAGACCAGCACCACGCCGTTCACCATCGTCGACAACCACAGCGGCAGCGGCACGACCCTGGGCGTCTA
CCTGCAGGATGAGTGGAAGCCCACCGACAAGCTCACCGTCAACTACGGCGCGCGCTACGACCGCGTCAACACCATCGTCA
GCGAGCAGCAACTGAGCCCGCGCCTTGGCCTGACGTACGACCTGACGCCGCGTACCCGCGTGCATGCCGGCTACGCGCGC
TACTTCACGCCGCCGCCCACGGAGAAGTTCGACACCACGTCGGTGCAGGCCTTTGCAGGCACGACCAACGCGCTGCCGTC
GGACGCCAACACGGCCGTCAAGTCGGAGCGTTCGAACTACTTTGATCTGGGGATTTCGCACCAGCTCACGCCGCATCTGA
CGCTGGGTCTGGATGCGTATTACCGCGACGTGCGCCATCTGCAGGACGAAGGGCAGTTCGGCAACGCGCTGCTGTACTCG
GCGTTCAATTACGAGCGTGGCCGGATCTACGGGCTGGAAGGCAGTGCGAACTATCGCAACGGCAACTTCGGGGCATACCT
GAATCTGGCCGTGTCGCGCGCGCAGGGCAAGGGCATCGAGACCGGCCAGTTCAACTTTGGTGCCAACGAGCTGGCCTATA
TCAACAGCCATTGGGTCAACCTCGATCACGACCAGCGCCTGACCGCGTCGGCTGGCGTGTCGTACCGGTATTCCGGCACG
ACGTATACGAGCGATGTGCTGTTCGGAACGGGCTTGCGTAACGGCTTTGTCAACACCGACCACCTGCCGGCCTACTGGCA
GATGAACGTGGGCGCCGCCCGCGACTTCAACCTGCCGACGCTGGGCAAGTTCAAGACGCGCCTGACCGTGCTGAACATCT
TCGACCGCAGCTACCAGTTGCGCGACGGCACGGGCATCGGCGTGGGGGCGCCGCAGTTTGCACCGCGCCGTACGTTCCTG
TTGTCGGTCAGCAAGCCGTTCTAA

Upstream 100 bases:

>100_bases
CATTCCGCCTTTGATTCCTGCCCTGCCCGTCGGCGCGCGCGTTGTGTTGACGCATGCGCGGGCCGCTGTTTAACGCATCC
GCTCGATTCAAAGGTCTTTC

Downstream 100 bases:

>100_bases
GCAAATCGGGCCAGCACATGTCGCTGGCCCGATGTTGCATCCATTACATCGTCATCACATCGGCGGGACCATCCCGTCCT
TGCCGACCAGCACCCGTTGT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Nb-Dependent Outer Membrane Receptor Protein; NB Dependent Receptor; NB-Dependent Receptor Plug; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Iron Transport; Outer Membrane Colicin I Receptor; Nb-Dependent Receptor; NB Potential Colicin Receptor; Cna Protein B-Type Domain Protein; Colicin I Receptor; NB-Dependent Siderophore Receptor; Ferrichrome-Iron Receptor

Number of amino acids: Translated: 727; Mature: 727

Protein sequence:

>727_residues
MIPFQPSKLVMALAAVLPSVASVSALAQEATPPAAAPSTPTTTAPATNVRDLSETRVTAKRLDAARNALSPDTGSSVYKF
DTDDIARLPLGDATPLNQVLLQAPGVVQDSYGQLHVRGDHSNLQYRINGVIVPEPISGFGQMLDTRFANQINVLTGALPA
QYGYRTAGIVDITTKGASTDEDGEPKAFGGEIGTVLGSNATHEVNAQIQGTKDRFSYYLSGVFAENNLGIENPTGNRNAT
HDHTTQNKSFGMLSYLLDNDSRVSFMFGTSNGRFQIPTRPGLTPKFTLDGAVPPASEALNANQREKTDFQILTYQQKVSP
KLDYQVSVFRRVSRIDYMPDPIGDLVYNGVAADITRRNEAYGVQGDASYKLTDKHTLRAGVFVQRERYVANNTASVFAAD
DSGAQTSTTPFTIVDNHSGSGTTLGVYLQDEWKPTDKLTVNYGARYDRVNTIVSEQQLSPRLGLTYDLTPRTRVHAGYAR
YFTPPPTEKFDTTSVQAFAGTTNALPSDANTAVKSERSNYFDLGISHQLTPHLTLGLDAYYRDVRHLQDEGQFGNALLYS
AFNYERGRIYGLEGSANYRNGNFGAYLNLAVSRAQGKGIETGQFNFGANELAYINSHWVNLDHDQRLTASAGVSYRYSGT
TYTSDVLFGTGLRNGFVNTDHLPAYWQMNVGAARDFNLPTLGKFKTRLTVLNIFDRSYQLRDGTGIGVGAPQFAPRRTFL
LSVSKPF

Sequences:

>Translated_727_residues
MIPFQPSKLVMALAAVLPSVASVSALAQEATPPAAAPSTPTTTAPATNVRDLSETRVTAKRLDAARNALSPDTGSSVYKF
DTDDIARLPLGDATPLNQVLLQAPGVVQDSYGQLHVRGDHSNLQYRINGVIVPEPISGFGQMLDTRFANQINVLTGALPA
QYGYRTAGIVDITTKGASTDEDGEPKAFGGEIGTVLGSNATHEVNAQIQGTKDRFSYYLSGVFAENNLGIENPTGNRNAT
HDHTTQNKSFGMLSYLLDNDSRVSFMFGTSNGRFQIPTRPGLTPKFTLDGAVPPASEALNANQREKTDFQILTYQQKVSP
KLDYQVSVFRRVSRIDYMPDPIGDLVYNGVAADITRRNEAYGVQGDASYKLTDKHTLRAGVFVQRERYVANNTASVFAAD
DSGAQTSTTPFTIVDNHSGSGTTLGVYLQDEWKPTDKLTVNYGARYDRVNTIVSEQQLSPRLGLTYDLTPRTRVHAGYAR
YFTPPPTEKFDTTSVQAFAGTTNALPSDANTAVKSERSNYFDLGISHQLTPHLTLGLDAYYRDVRHLQDEGQFGNALLYS
AFNYERGRIYGLEGSANYRNGNFGAYLNLAVSRAQGKGIETGQFNFGANELAYINSHWVNLDHDQRLTASAGVSYRYSGT
TYTSDVLFGTGLRNGFVNTDHLPAYWQMNVGAARDFNLPTLGKFKTRLTVLNIFDRSYQLRDGTGIGVGAPQFAPRRTFL
LSVSKPF
>Mature_727_residues
MIPFQPSKLVMALAAVLPSVASVSALAQEATPPAAAPSTPTTTAPATNVRDLSETRVTAKRLDAARNALSPDTGSSVYKF
DTDDIARLPLGDATPLNQVLLQAPGVVQDSYGQLHVRGDHSNLQYRINGVIVPEPISGFGQMLDTRFANQINVLTGALPA
QYGYRTAGIVDITTKGASTDEDGEPKAFGGEIGTVLGSNATHEVNAQIQGTKDRFSYYLSGVFAENNLGIENPTGNRNAT
HDHTTQNKSFGMLSYLLDNDSRVSFMFGTSNGRFQIPTRPGLTPKFTLDGAVPPASEALNANQREKTDFQILTYQQKVSP
KLDYQVSVFRRVSRIDYMPDPIGDLVYNGVAADITRRNEAYGVQGDASYKLTDKHTLRAGVFVQRERYVANNTASVFAAD
DSGAQTSTTPFTIVDNHSGSGTTLGVYLQDEWKPTDKLTVNYGARYDRVNTIVSEQQLSPRLGLTYDLTPRTRVHAGYAR
YFTPPPTEKFDTTSVQAFAGTTNALPSDANTAVKSERSNYFDLGISHQLTPHLTLGLDAYYRDVRHLQDEGQFGNALLYS
AFNYERGRIYGLEGSANYRNGNFGAYLNLAVSRAQGKGIETGQFNFGANELAYINSHWVNLDHDQRLTASAGVSYRYSGT
TYTSDVLFGTGLRNGFVNTDHLPAYWQMNVGAARDFNLPTLGKFKTRLTVLNIFDRSYQLRDGTGIGVGAPQFAPRRTFL
LSVSKPF

Specific function: Unknown

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79378; Mature: 79378

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPFQPSKLVMALAAVLPSVASVSALAQEATPPAAAPSTPTTTAPATNVRDLSETRVTAK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RLDAARNALSPDTGSSVYKFDTDDIARLPLGDATPLNQVLLQAPGVVQDSYGQLHVRGDH
HHHHHHHCCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHCCCCEECCCCEEEEEECC
SNLQYRINGVIVPEPISGFGQMLDTRFANQINVLTGALPAQYGYRTAGIVDITTKGASTD
CCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEECCCCCC
EDGEPKAFGGEIGTVLGSNATHEVNAQIQGTKDRFSYYLSGVFAENNLGIENPTGNRNAT
CCCCCCCCCCCHHHHCCCCCCEEEEEEEECCHHHHHEEHEEEEECCCCCCCCCCCCCCCC
HDHTTQNKSFGMLSYLLDNDSRVSFMFGTSNGRFQIPTRPGLTPKFTLDGAVPPASEALN
CCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEECCCCCCCCEEEEECCCCCCHHHHCC
ANQREKTDFQILTYQQKVSPKLDYQVSVFRRVSRIDYMPDPIGDLVYNGVAADITRRNEA
CCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHCCCCC
YGVQGDASYKLTDKHTLRAGVFVQRERYVANNTASVFAADDSGAQTSTTPFTIVDNHSGS
CCCCCCCCEEECCCCEEEECEEEEECEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCC
GTTLGVYLQDEWKPTDKLTVNYGARYDRVNTIVSEQQLSPRLGLTYDLTPRTRVHAGYAR
CCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEECCEEE
YFTPPPTEKFDTTSVQAFAGTTNALPSDANTAVKSERSNYFDLGISHQLTPHLTLGLDAY
ECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCEEEECHHHH
YRDVRHLQDEGQFGNALLYSAFNYERGRIYGLEGSANYRNGNFGAYLNLAVSRAQGKGIE
HHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCC
TGQFNFGANELAYINSHWVNLDHDQRLTASAGVSYRYSGTTYTSDVLFGTGLRNGFVNTD
CCCCCCCCCEEEEEECEEEECCCCCCEEHHCCCEEEECCCEEECCEEEECCCCCCCCCCC
HLPAYWQMNVGAARDFNLPTLGKFKTRLTVLNIFDRSYQLRDGTGIGVGAPQFAPRRTFL
CCCEEEEECCCCCCCCCCCCCCCHHHEEEEEEEECCCEEECCCCCCCCCCCCCCCCEEEE
LSVSKPF
EEECCCC
>Mature Secondary Structure
MIPFQPSKLVMALAAVLPSVASVSALAQEATPPAAAPSTPTTTAPATNVRDLSETRVTAK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RLDAARNALSPDTGSSVYKFDTDDIARLPLGDATPLNQVLLQAPGVVQDSYGQLHVRGDH
HHHHHHHCCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHCCCCEECCCCEEEEEECC
SNLQYRINGVIVPEPISGFGQMLDTRFANQINVLTGALPAQYGYRTAGIVDITTKGASTD
CCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEECCCCCC
EDGEPKAFGGEIGTVLGSNATHEVNAQIQGTKDRFSYYLSGVFAENNLGIENPTGNRNAT
CCCCCCCCCCCHHHHCCCCCCEEEEEEEECCHHHHHEEHEEEEECCCCCCCCCCCCCCCC
HDHTTQNKSFGMLSYLLDNDSRVSFMFGTSNGRFQIPTRPGLTPKFTLDGAVPPASEALN
CCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEECCCCCCCCEEEEECCCCCCHHHHCC
ANQREKTDFQILTYQQKVSPKLDYQVSVFRRVSRIDYMPDPIGDLVYNGVAADITRRNEA
CCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHCCCCC
YGVQGDASYKLTDKHTLRAGVFVQRERYVANNTASVFAADDSGAQTSTTPFTIVDNHSGS
CCCCCCCCEEECCCCEEEECEEEEECEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCC
GTTLGVYLQDEWKPTDKLTVNYGARYDRVNTIVSEQQLSPRLGLTYDLTPRTRVHAGYAR
CCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEECCEEE
YFTPPPTEKFDTTSVQAFAGTTNALPSDANTAVKSERSNYFDLGISHQLTPHLTLGLDAY
ECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCEEEECHHHH
YRDVRHLQDEGQFGNALLYSAFNYERGRIYGLEGSANYRNGNFGAYLNLAVSRAQGKGIE
HHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCC
TGQFNFGANELAYINSHWVNLDHDQRLTASAGVSYRYSGTTYTSDVLFGTGLRNGFVNTD
CCCCCCCCCEEEEEECEEEECCCCCCEEHHCCCEEEECCCEEECCEEEECCCCCCCCCCC
HLPAYWQMNVGAARDFNLPTLGKFKTRLTVLNIFDRSYQLRDGTGIGVGAPQFAPRRTFL
CCCEEEEECCCCCCCCCCCCCCCHHHEEEEEEEECCCEEECCCCCCCCCCCCCCCCEEEE
LSVSKPF
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA