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The map label for this gene is rpfG [H]

Identifier: 187927618

GI number: 187927618

Start: 555755

End: 556975

Strand: Direct

Name: rpfG [H]

Synonym: Rpic_0518

Alternate gene names: 187927618

Gene position: 555755-556975 (Clockwise)

Preceding gene: 187927616

Following gene: 187927620

Centisome position: 14.1

GC content: 64.29

Gene sequence:

>1221_bases
ATGAAGCGAATCGATGCGAGCCAATTGCGTGTCGGCATGTTTGTGATGAAGCTGGGCGGGTCCTGGCTCAAGCATCCGTT
CTGGCGTGCGCAATTCCAGTTGTCCCACCAGGGTCAGATCGACGACATCCGCCGCGCGGGTATCACCGAGATCTGGATCG
ACCCCGAGCGCGGCGAAGACGTCATGTCGGAGACGCTGATGCCCGCCCCGGCTCCGGCCCCGGCACCCGCGCCCGAGCCG
CTCACGCGCGAAACCCTGGCCGCGCGGCCGCCGCTCACGCCGACGTCGCTCAAGGAAGAGTGGAAGCACGCCCAGCAGCT
GATGCAGAACGGCAAGGCGACGCTTGGCCACATGTTTGCCGAAGCGCGCATGGGCCGTGCGCTGGAAACCGAAAAGGCGC
TGCTGCTGGTGGATGACGTGTCGAACTCGCTGGCACGCAACTCCTACGCGCTGATTGCGCTGGCGCGGCTGAAGAACAAG
GACGACTACACCTACCTGCATTCGTTTGCCGTGTGTGCGTTGATGGTGGCGCTGGCCAAGACGCTGGGGCTGCCTGAAGA
CGAGATTCGCGAATGCGGGCTGGGCGGGCTGGTGCACGACATCGGCAAATCCGCCATGCCGCGCACGCTGCTCGACAAGA
GCACCGCGCTCACCAAGGACGAGCTGGCGCTGCTGCAGACGCACGCCGTGGGCGGCCATCACCTGCTGCAGGGTACCGGC
CAGTTCAGCGAGATTGCGCGCGAGATCTGCCTGCACCACCATGAGCGCATTGACGGCAGCGGCTATCCCGACGCCCAGAA
GGCCGACGGCATCAGCCTGTGGGCCAAGATGGGCGCCATTTGCGATGTGTACGACACGCTCACGTCGAGCAGCCCGTACC
ACCATGCGTGGTCTCCCGCGCAGGCGCTGAAATACATGATGGCGCGCACAGACACGCAGTTCGACCGGACCGTGTTCCAG
GCCTTCACGCGCAGCGTGGGCATTTACCCGGTGGGCACGCTGGTCAAACTGCGCACTAACCGGCTGGGTGTGGTAGTCCA
CCAGAACGATGCGTCTGCGCTCAAGCCGGATGTGGTCGTTTTCTATTCGGGCAACACCAAGACGCGCGTGCGCCCCGAGC
GCATCAGTTTGGGCAAGTCCGACGATTCGATCGTCACCGTGGAAGACGCCACCACCTGGGGTTTGTCGGACGAGGAAGTC
TCCGACATGTGCCTGGTCTGA

Upstream 100 bases:

>100_bases
CGTAAAACGCCTAGACTGCGAAACACGAGCCAGTGTCGGCTGGCACGCCGCTCCCCTAATTCAATCAAAAAACCGGACTT
CGAGCCGAGGTAGGCAGGGT

Downstream 100 bases:

>100_bases
GGCGTCGGCTCACGGCGTCAGAAGTCTTCCACGGGAGGCTCTTTCTGCTCCGCTGGATTCGGGCGGGTGTCGCGTGGTAC
CAGCGGCTCGCCCGGCTTGC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MKRIDASQLRVGMFVMKLGGSWLKHPFWRAQFQLSHQGQIDDIRRAGITEIWIDPERGEDVMSETLMPAPAPAPAPAPEP
LTRETLAARPPLTPTSLKEEWKHAQQLMQNGKATLGHMFAEARMGRALETEKALLLVDDVSNSLARNSYALIALARLKNK
DDYTYLHSFAVCALMVALAKTLGLPEDEIRECGLGGLVHDIGKSAMPRTLLDKSTALTKDELALLQTHAVGGHHLLQGTG
QFSEIAREICLHHHERIDGSGYPDAQKADGISLWAKMGAICDVYDTLTSSSPYHHAWSPAQALKYMMARTDTQFDRTVFQ
AFTRSVGIYPVGTLVKLRTNRLGVVVHQNDASALKPDVVVFYSGNTKTRVRPERISLGKSDDSIVTVEDATTWGLSDEEV
SDMCLV

Sequences:

>Translated_406_residues
MKRIDASQLRVGMFVMKLGGSWLKHPFWRAQFQLSHQGQIDDIRRAGITEIWIDPERGEDVMSETLMPAPAPAPAPAPEP
LTRETLAARPPLTPTSLKEEWKHAQQLMQNGKATLGHMFAEARMGRALETEKALLLVDDVSNSLARNSYALIALARLKNK
DDYTYLHSFAVCALMVALAKTLGLPEDEIRECGLGGLVHDIGKSAMPRTLLDKSTALTKDELALLQTHAVGGHHLLQGTG
QFSEIAREICLHHHERIDGSGYPDAQKADGISLWAKMGAICDVYDTLTSSSPYHHAWSPAQALKYMMARTDTQFDRTVFQ
AFTRSVGIYPVGTLVKLRTNRLGVVVHQNDASALKPDVVVFYSGNTKTRVRPERISLGKSDDSIVTVEDATTWGLSDEEV
SDMCLV
>Mature_406_residues
MKRIDASQLRVGMFVMKLGGSWLKHPFWRAQFQLSHQGQIDDIRRAGITEIWIDPERGEDVMSETLMPAPAPAPAPAPEP
LTRETLAARPPLTPTSLKEEWKHAQQLMQNGKATLGHMFAEARMGRALETEKALLLVDDVSNSLARNSYALIALARLKNK
DDYTYLHSFAVCALMVALAKTLGLPEDEIRECGLGGLVHDIGKSAMPRTLLDKSTALTKDELALLQTHAVGGHHLLQGTG
QFSEIAREICLHHHERIDGSGYPDAQKADGISLWAKMGAICDVYDTLTSSSPYHHAWSPAQALKYMMARTDTQFDRTVFQ
AFTRSVGIYPVGTLVKLRTNRLGVVVHQNDASALKPDVVVFYSGNTKTRVRPERISLGKSDDSIVTVEDATTWGLSDEEV
SDMCLV

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 44824; Mature: 44824

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIDASQLRVGMFVMKLGGSWLKHPFWRAQFQLSHQGQIDDIRRAGITEIWIDPERGED
CCCCCHHHHHHHHHHHHHCCHHHHCCHHHEEEEECCCCCHHHHHHCCCEEEEECCCCCHH
VMSETLMPAPAPAPAPAPEPLTRETLAARPPLTPTSLKEEWKHAQQLMQNGKATLGHMFA
HHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
EARMGRALETEKALLLVDDVSNSLARNSYALIALARLKNKDDYTYLHSFAVCALMVALAK
HHHHCCHHCCCCEEEEEEHHHHHHHHCCHHEEEEEHHCCCCCHHHHHHHHHHHHHHHHHH
TLGLPEDEIRECGLGGLVHDIGKSAMPRTLLDKSTALTKDELALLQTHAVGGHHLLQGTG
HCCCCHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCC
QFSEIAREICLHHHERIDGSGYPDAQKADGISLWAKMGAICDVYDTLTSSSPYHHAWSPA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
QALKYMMARTDTQFDRTVFQAFTRSVGIYPVGTLVKLRTNRLGVVVHQNDASALKPDVVV
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEE
FYSGNTKTRVRPERISLGKSDDSIVTVEDATTWGLSDEEVSDMCLV
EECCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKRIDASQLRVGMFVMKLGGSWLKHPFWRAQFQLSHQGQIDDIRRAGITEIWIDPERGED
CCCCCHHHHHHHHHHHHHCCHHHHCCHHHEEEEECCCCCHHHHHHCCCEEEEECCCCCHH
VMSETLMPAPAPAPAPAPEPLTRETLAARPPLTPTSLKEEWKHAQQLMQNGKATLGHMFA
HHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
EARMGRALETEKALLLVDDVSNSLARNSYALIALARLKNKDDYTYLHSFAVCALMVALAK
HHHHCCHHCCCCEEEEEEHHHHHHHHCCHHEEEEEHHCCCCCHHHHHHHHHHHHHHHHHH
TLGLPEDEIRECGLGGLVHDIGKSAMPRTLLDKSTALTKDELALLQTHAVGGHHLLQGTG
HCCCCHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCC
QFSEIAREICLHHHERIDGSGYPDAQKADGISLWAKMGAICDVYDTLTSSSPYHHAWSPA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
QALKYMMARTDTQFDRTVFQAFTRSVGIYPVGTLVKLRTNRLGVVVHQNDASALKPDVVV
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEE
FYSGNTKTRVRPERISLGKSDDSIVTVEDATTWGLSDEEVSDMCLV
EECCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]