| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is purC [H]
Identifier: 187927594
GI number: 187927594
Start: 526789
End: 527712
Strand: Direct
Name: purC [H]
Synonym: Rpic_0494
Alternate gene names: 187927594
Gene position: 526789-527712 (Clockwise)
Preceding gene: 187927593
Following gene: 187927595
Centisome position: 13.36
GC content: 65.48
Gene sequence:
>924_bases GTGTCCGCCACCCCTGCATCCTCCGCCCTTTACGAATCGTCGATCACCAGCCTGCCGTTGCTCGGCCGTGGCAAGGTGCG CGAGAACTACGCTGTCGGCGACGACAAGCTGCTGATGGTCACCACCGACCGCCTCTCGGCGTTTGACGTGATTCTTGGCC AGCCGATTCCGGACAAGGGCCGTGTGCTCGCGCAGATGTCGGATTTCTGGTTCAACAAGCTGCGCCACATCGTGCCGACA CACGAGACGGGCATCGCGCCGGAAACCGTGGTGGCCCCGAACGAAGTCGACCAGGTGCGCGGCCGCGCCATTGTGGTCAA GCGTCTGAAGCCGATCCTGGTGGAAGCCGTGGTGCGCGGTTACCTGGCCGGCAGCGGCTGGAAGGATTACCAGGCCACCG GCGCCGTGTGCGGTGTGCATCTGGCCCCCGGCCTGCAGAACGCGCAGAAGCTGCCCGAGCCGATCTTCACCCCCGCCGCC AAGGCCGAGATGGGCGAGCACGACGAGAACATCTCGTTCGATGAAGTCGAGCGCCGCATCGGCCCGGACCTCGCCGCGCA GATCCGCGACGTGAGCATCCGCCTGTACAAGGAAGCCTCGGACTTTGCCGCCACGCGCGGCATCATCATTGCCGACACCA AGTTCGAGTTTGGCCTGGACGAAAACGGCACGCTTACGCTGATGGACGAGGCGCTCACCGCAGACTCGTCGCGCTTCTGG CCGGCCGATTCGTACCAGGTCGGTACGAACCCGCCGTCGTTCGACAAGCAGTTCGTGCGCGACTGGCTCGAAGCCGTGCG CATCGATGGCAAGCCGTGGCCGAAGACCGCGCCGGCGCCGCAACTGCCTGCCGACGTGATCGAAAAGACCGCTGACAAAT ACCGCGAGGCGCTGACCCGCCTGACCGGCGAGTCCCTGCGATAA
Upstream 100 bases:
>100_bases CGCCAGCCGTTTTGCATTGCATGGGCCATCTTATGGGCCACCCATGGGCCACGTATAATGCTGGCCTTCCACGTTTTCTT ATCTCCTCCCGGGTTCCGCC
Downstream 100 bases:
>100_bases ACCGGAGCGATGACAATGACCGCACAGCAATCTGCTCCGCTCGTTGGCGTGGTGATGGGCTCCAGCTCCGACTGGGAAGT GATGCGCCACGCCGTCGATA
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSATPASSALYESSITSLPLLGRGKVRENYAVGDDKLLMVTTDRLSAFDVILGQPIPDKGRVLAQMSDFWFNKLRHIVPT HETGIAPETVVAPNEVDQVRGRAIVVKRLKPILVEAVVRGYLAGSGWKDYQATGAVCGVHLAPGLQNAQKLPEPIFTPAA KAEMGEHDENISFDEVERRIGPDLAAQIRDVSIRLYKEASDFAATRGIIIADTKFEFGLDENGTLTLMDEALTADSSRFW PADSYQVGTNPPSFDKQFVRDWLEAVRIDGKPWPKTAPAPQLPADVIEKTADKYREALTRLTGESLR
Sequences:
>Translated_307_residues MSATPASSALYESSITSLPLLGRGKVRENYAVGDDKLLMVTTDRLSAFDVILGQPIPDKGRVLAQMSDFWFNKLRHIVPT HETGIAPETVVAPNEVDQVRGRAIVVKRLKPILVEAVVRGYLAGSGWKDYQATGAVCGVHLAPGLQNAQKLPEPIFTPAA KAEMGEHDENISFDEVERRIGPDLAAQIRDVSIRLYKEASDFAATRGIIIADTKFEFGLDENGTLTLMDEALTADSSRFW PADSYQVGTNPPSFDKQFVRDWLEAVRIDGKPWPKTAPAPQLPADVIEKTADKYREALTRLTGESLR >Mature_306_residues SATPASSALYESSITSLPLLGRGKVRENYAVGDDKLLMVTTDRLSAFDVILGQPIPDKGRVLAQMSDFWFNKLRHIVPTH ETGIAPETVVAPNEVDQVRGRAIVVKRLKPILVEAVVRGYLAGSGWKDYQATGAVCGVHLAPGLQNAQKLPEPIFTPAAK AEMGEHDENISFDEVERRIGPDLAAQIRDVSIRLYKEASDFAATRGIIIADTKFEFGLDENGTLTLMDEALTADSSRFWP ADSYQVGTNPPSFDKQFVRDWLEAVRIDGKPWPKTAPAPQLPADVIEKTADKYREALTRLTGESLR
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=296, Percent_Identity=45.2702702702703, Blast_Score=265, Evalue=7e-72,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 33746; Mature: 33614
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS01057 SAICAR_SYNTHETASE_1 ; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATPASSALYESSITSLPLLGRGKVRENYAVGDDKLLMVTTDRLSAFDVILGQPIPDKG CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCC RVLAQMSDFWFNKLRHIVPTHETGIAPETVVAPNEVDQVRGRAIVVKRLKPILVEAVVRG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHCCHHHHHHHHHHHHHHHHHHH YLAGSGWKDYQATGAVCGVHLAPGLQNAQKLPEPIFTPAAKAEMGEHDENISFDEVERRI HHCCCCCCCHHHCCCEEEEECCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHH GPDLAAQIRDVSIRLYKEASDFAATRGIIIADTKFEFGLDENGTLTLMDEALTADSSRFW CCHHHHHHHHHHHEEEHHHHHHHHHCCEEEEECCEEECCCCCCEEEEEEHHHCCCCCCCC PADSYQVGTNPPSFDKQFVRDWLEAVRIDGKPWPKTAPAPQLPADVIEKTADKYREALTR CCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LTGESLR HCCCCCC >Mature Secondary Structure SATPASSALYESSITSLPLLGRGKVRENYAVGDDKLLMVTTDRLSAFDVILGQPIPDKG CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCC RVLAQMSDFWFNKLRHIVPTHETGIAPETVVAPNEVDQVRGRAIVVKRLKPILVEAVVRG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHCCHHHHHHHHHHHHHHHHHHH YLAGSGWKDYQATGAVCGVHLAPGLQNAQKLPEPIFTPAAKAEMGEHDENISFDEVERRI HHCCCCCCCHHHCCCEEEEECCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHH GPDLAAQIRDVSIRLYKEASDFAATRGIIIADTKFEFGLDENGTLTLMDEALTADSSRFW CCHHHHHHHHHHHEEEHHHHHHHHHCCEEEEECCEEECCCCCCEEEEEEHHHCCCCCCCC PADSYQVGTNPPSFDKQFVRDWLEAVRIDGKPWPKTAPAPQLPADVIEKTADKYREALTR CCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LTGESLR HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]