| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is bcgIA [H]
Identifier: 187927116
GI number: 187927116
Start: 6281
End: 8413
Strand: Direct
Name: bcgIA [H]
Synonym: Rpic_0004
Alternate gene names: 187927116
Gene position: 6281-8413 (Clockwise)
Preceding gene: 187927115
Following gene: 187927117
Centisome position: 0.16
GC content: 51.34
Gene sequence:
>2133_bases ATGGCAACCGGAAAGCGGGCTCGCTCCCAACTAAAGCCACTTGTAGCAGCCTCGCCTCAAAGCGAGGTCGAAGCGTATCA CTTCATCCGAGAAAACCTGAAAGAGGTGGGCTGGGTCGTCAAAAATCCTTCACGCTATAGCGAAGGACAGGTATGGACGC AGAACCAATGTTTTGAACATCCTGTTTTAAAGTCTGCACTCAAATTAATGCGTCCCGAGAATATCGTAAAACTCTCGGAA ACCAAGGTATGGGTGATTGAAGCTAAGAGTCGGAAAGCCGCTTTGGGACAAGCGCTCAAAGAGGCGGAGAACGACTATGC TGCACCTATTAACAAAGGTCGAGGCATTAAAGCTGTACTCATAAGCGGTGTGGCTGGAAACGACGAGTCTGGCTACGAAG TGCGCACCAAGATGCTCGTGCGCGGTCGTTACGAGAGCGTTACGATTAACGGTGTAGAGGCTACAGGCCTACTTGATCCG CGTACCGTTGAAACGCTACTTATTTCGGGTAGTCCGGATATTGCTGACTATCAGGTTAACGAAGAACTGTTTCTTCGAGC CGCAGAGCAAATCAACGCGACACTCCACAACGGTGGGATCAATAAGAATGATCGGTCCCGAGTTATGGCAGCGCTGCTGT TAGCCCTGGTGGAGACCGCATCGCTTGATCTTGAGGGCGATTTGCCGGTTCTTATTGGTGACATCAACAATCGTACGGAT TCCGCGCTTCGTCGTCACGGGAAGCGGGAATTTCACCCGTTTGTAAAAATTGAACCACCAACAAATCCGGATAGTCACGT CAAATATAAGGCAGCAATAGTTAGAACAATTCAGCAACTGCTTGACCTAAACATCAAGTCCGCTATGAATTCTGGGACCG ATGTCCTGGGTAAGTTCTACGAGGTCTTCTTGCGCTACGGTAATGGTGCCAAGGAAATAGGCATTGTTTTGACGCCCAGG CACATTACTCGGTTCGCCGTCGATGCAGTTGGCGTTTCTCCAAGTGATCTGGTTTTTGATCCGGCCTGTGGGACAGGAGG CTTCTTGGTAGCGGCGTTCGATCATGTTCGAGCAAAAACCAAGGGGGCGCCGCTTGAGAGATTCAAGAGATTTGGCTTGT TTGGTATCGAACAGGAATCATCGGTTGCCGCGTTGGCTATCGTCAACATGATCTTTCGCGGCGATGGAAAGAACAACATA GTAGAGGCAGACTGTTTTAATCGATTTCTTACTCGATCCACAAATGACGGTCACGCAACAGCGCAGTATGTGAAAGCGAA ACCCAAATTGGGTGAGGAGCCGATTACGCGTGTTTTTATGAATCCACCATTCGCCTTAAAGAAGTCGGACGAGCATGAAT GGCGGTTTGTGGAAACTGCACTGAAATCGATGGCGGATGGAGCTCTCTTGCTGGCCATCGTTCCTATGTCTGTCGTCTCG GAGGGCGGCAGCGCTGGAGCGTGGAGACGCCCGCTCCTTGAGCATCATTCCGTAGTTGCCGTTGTTAGTCTGCCAGAGGA ATTGTTCTACCCCGTGGCTGTACAAGCGGTGGCGATCATTCTCCGAAAAGGTGTGCCGCACAGGGCTGAGCAGCCGGTAC TTTGGGCGCGGGTCGTCAATGATGGTTATCGGAAGTCCAAAGGTAAGCGCTTGCCAGTGCCAGGCGTGAACGATCTGGAC GCCCTCAAACCAAAGCTTCGGGCATTTATTGCAGATCCCGATGAGCCTATCGAAGGGGAGCCGGCACGCATAAAGATCTC CCCCCTTGATCTAAGCGACCCTATCCTGGAGCTTGCGCCTGAAGCCTATCTTGACAGTCAGGTCCCCACTTCCAAGGAGT TGCAATCCCGATTGGATGTGCAGGTCAGGGAAAATATCGCTGCACTCGTATCTCTTGATCTCAAGAGCACGTCGGTGGGC TCCGGAGGTATCGTGGATGCGGCGGTGGGACTTTCTCCGATCTCCGAGGAATTTCCAAAGCGCTATTCAAAATTCGGTGA GTATTCTTTAAATTCCTTGTTTGAACTCGAGGCGGGCGACTACCACAATTTAAATTCGCTGGAAGGGGGGTATTCCCGTG GCCTCGTGCGCGGATGGGAACAATGGAATTGCCGGTTTCTACGAAATTCCTAG
Upstream 100 bases:
>100_bases GTTACTACTAACACTAGTGGGTATGCGACATGTCGGGTACATTCCGCGGGTGTAGGCGATAACACGTAACTTTTATACTG TCTTAGGAAATAGTCGAACA
Downstream 100 bases:
>100_bases GCGTATGGCGTATGCAAACGCAATTACGATTGCGTTCAACGGGAGTCCATTGACCACCAAACTGCACCCCTATGAATTTG GGGCAAAAGATGATGTGGCA
Product: N-6 DNA methylase
Products: NA
Alternate protein names: Adenine-specific methyltransferase activity [H]
Number of amino acids: Translated: 710; Mature: 709
Protein sequence:
>710_residues MATGKRARSQLKPLVAASPQSEVEAYHFIRENLKEVGWVVKNPSRYSEGQVWTQNQCFEHPVLKSALKLMRPENIVKLSE TKVWVIEAKSRKAALGQALKEAENDYAAPINKGRGIKAVLISGVAGNDESGYEVRTKMLVRGRYESVTINGVEATGLLDP RTVETLLISGSPDIADYQVNEELFLRAAEQINATLHNGGINKNDRSRVMAALLLALVETASLDLEGDLPVLIGDINNRTD SALRRHGKREFHPFVKIEPPTNPDSHVKYKAAIVRTIQQLLDLNIKSAMNSGTDVLGKFYEVFLRYGNGAKEIGIVLTPR HITRFAVDAVGVSPSDLVFDPACGTGGFLVAAFDHVRAKTKGAPLERFKRFGLFGIEQESSVAALAIVNMIFRGDGKNNI VEADCFNRFLTRSTNDGHATAQYVKAKPKLGEEPITRVFMNPPFALKKSDEHEWRFVETALKSMADGALLLAIVPMSVVS EGGSAGAWRRPLLEHHSVVAVVSLPEELFYPVAVQAVAIILRKGVPHRAEQPVLWARVVNDGYRKSKGKRLPVPGVNDLD ALKPKLRAFIADPDEPIEGEPARIKISPLDLSDPILELAPEAYLDSQVPTSKELQSRLDVQVRENIAALVSLDLKSTSVG SGGIVDAAVGLSPISEEFPKRYSKFGEYSLNSLFELEAGDYHNLNSLEGGYSRGLVRGWEQWNCRFLRNS
Sequences:
>Translated_710_residues MATGKRARSQLKPLVAASPQSEVEAYHFIRENLKEVGWVVKNPSRYSEGQVWTQNQCFEHPVLKSALKLMRPENIVKLSE TKVWVIEAKSRKAALGQALKEAENDYAAPINKGRGIKAVLISGVAGNDESGYEVRTKMLVRGRYESVTINGVEATGLLDP RTVETLLISGSPDIADYQVNEELFLRAAEQINATLHNGGINKNDRSRVMAALLLALVETASLDLEGDLPVLIGDINNRTD SALRRHGKREFHPFVKIEPPTNPDSHVKYKAAIVRTIQQLLDLNIKSAMNSGTDVLGKFYEVFLRYGNGAKEIGIVLTPR HITRFAVDAVGVSPSDLVFDPACGTGGFLVAAFDHVRAKTKGAPLERFKRFGLFGIEQESSVAALAIVNMIFRGDGKNNI VEADCFNRFLTRSTNDGHATAQYVKAKPKLGEEPITRVFMNPPFALKKSDEHEWRFVETALKSMADGALLLAIVPMSVVS EGGSAGAWRRPLLEHHSVVAVVSLPEELFYPVAVQAVAIILRKGVPHRAEQPVLWARVVNDGYRKSKGKRLPVPGVNDLD ALKPKLRAFIADPDEPIEGEPARIKISPLDLSDPILELAPEAYLDSQVPTSKELQSRLDVQVRENIAALVSLDLKSTSVG SGGIVDAAVGLSPISEEFPKRYSKFGEYSLNSLFELEAGDYHNLNSLEGGYSRGLVRGWEQWNCRFLRNS >Mature_709_residues ATGKRARSQLKPLVAASPQSEVEAYHFIRENLKEVGWVVKNPSRYSEGQVWTQNQCFEHPVLKSALKLMRPENIVKLSET KVWVIEAKSRKAALGQALKEAENDYAAPINKGRGIKAVLISGVAGNDESGYEVRTKMLVRGRYESVTINGVEATGLLDPR TVETLLISGSPDIADYQVNEELFLRAAEQINATLHNGGINKNDRSRVMAALLLALVETASLDLEGDLPVLIGDINNRTDS ALRRHGKREFHPFVKIEPPTNPDSHVKYKAAIVRTIQQLLDLNIKSAMNSGTDVLGKFYEVFLRYGNGAKEIGIVLTPRH ITRFAVDAVGVSPSDLVFDPACGTGGFLVAAFDHVRAKTKGAPLERFKRFGLFGIEQESSVAALAIVNMIFRGDGKNNIV EADCFNRFLTRSTNDGHATAQYVKAKPKLGEEPITRVFMNPPFALKKSDEHEWRFVETALKSMADGALLLAIVPMSVVSE GGSAGAWRRPLLEHHSVVAVVSLPEELFYPVAVQAVAIILRKGVPHRAEQPVLWARVVNDGYRKSKGKRLPVPGVNDLDA LKPKLRAFIADPDEPIEGEPARIKISPLDLSDPILELAPEAYLDSQVPTSKELQSRLDVQVRENIAALVSLDLKSTSVGS GGIVDAAVGLSPISEEFPKRYSKFGEYSLNSLFELEAGDYHNLNSLEGGYSRGLVRGWEQWNCRFLRNS
Specific function: Recognizes the double-stranded sequence 5'-CGAN(6)TGC-3' and cleaves bilaterally and symmetrically outside the sequence to release a 34-base pair fragment. Methylation of the recognition sequence occurs on the adenine in either one or both strands [H]
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 [H]
Pfam domain/function: PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 78094; Mature: 77963
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGKRARSQLKPLVAASPQSEVEAYHFIRENLKEVGWVVKNPSRYSEGQVWTQNQCFEH CCCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCEEECCHHHCC PVLKSALKLMRPENIVKLSETKVWVIEAKSRKAALGQALKEAENDYAAPINKGRGIKAVL HHHHHHHHHHCCCCCEEEECCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE ISGVAGNDESGYEVRTKMLVRGRYESVTINGVEATGLLDPRTVETLLISGSPDIADYQVN EECCCCCCCCCHHHHHHHHHCCCCCEEEEECEEECCCCCCCEEEEEEEECCCCCCCEECC EELFLRAAEQINATLHNGGINKNDRSRVMAALLLALVETASLDLEGDLPVLIGDINNRTD HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHH SALRRHGKREFHPFVKIEPPTNPDSHVKYKAAIVRTIQQLLDLNIKSAMNSGTDVLGKFY HHHHHCCCHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHH EVFLRYGNGAKEIGIVLTPRHITRFAVDAVGVSPSDLVFDPACGTGGFLVAAFDHVRAKT HHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEHHHHHHHHHC KGAPLERFKRFGLFGIEQESSVAALAIVNMIFRGDGKNNIVEADCFNRFLTRSTNDGHAT CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCHHH AQYVKAKPKLGEEPITRVFMNPPFALKKSDEHEWRFVETALKSMADGALLLAIVPMSVVS HHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHH EGGSAGAWRRPLLEHHSVVAVVSLPEELFYPVAVQAVAIILRKGVPHRAEQPVLWARVVN CCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHH DGYRKSKGKRLPVPGVNDLDALKPKLRAFIADPDEPIEGEPARIKISPLDLSDPILELAP CHHHHCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCCCCHHHHHCC EAYLDSQVPTSKELQSRLDVQVRENIAALVSLDLKSTSVGSGGIVDAAVGLSPISEEFPK HHHHCCCCCCHHHHHHHHCHHHHHHHEEHEEEECCCCCCCCCCCCHHHHCCCHHHHHHHH RYSKFGEYSLNSLFELEAGDYHNLNSLEGGYSRGLVRGWEQWNCRFLRNS HHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCC >Mature Secondary Structure ATGKRARSQLKPLVAASPQSEVEAYHFIRENLKEVGWVVKNPSRYSEGQVWTQNQCFEH CCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCEEECCHHHCC PVLKSALKLMRPENIVKLSETKVWVIEAKSRKAALGQALKEAENDYAAPINKGRGIKAVL HHHHHHHHHHCCCCCEEEECCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE ISGVAGNDESGYEVRTKMLVRGRYESVTINGVEATGLLDPRTVETLLISGSPDIADYQVN EECCCCCCCCCHHHHHHHHHCCCCCEEEEECEEECCCCCCCEEEEEEEECCCCCCCEECC EELFLRAAEQINATLHNGGINKNDRSRVMAALLLALVETASLDLEGDLPVLIGDINNRTD HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHH SALRRHGKREFHPFVKIEPPTNPDSHVKYKAAIVRTIQQLLDLNIKSAMNSGTDVLGKFY HHHHHCCCHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHH EVFLRYGNGAKEIGIVLTPRHITRFAVDAVGVSPSDLVFDPACGTGGFLVAAFDHVRAKT HHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEHHHHHHHHHC KGAPLERFKRFGLFGIEQESSVAALAIVNMIFRGDGKNNIVEADCFNRFLTRSTNDGHAT CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCHHH AQYVKAKPKLGEEPITRVFMNPPFALKKSDEHEWRFVETALKSMADGALLLAIVPMSVVS HHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHH EGGSAGAWRRPLLEHHSVVAVVSLPEELFYPVAVQAVAIILRKGVPHRAEQPVLWARVVN CCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHH DGYRKSKGKRLPVPGVNDLDALKPKLRAFIADPDEPIEGEPARIKISPLDLSDPILELAP CHHHHCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCCCCHHHHHCC EAYLDSQVPTSKELQSRLDVQVRENIAALVSLDLKSTSVGSGGIVDAAVGLSPISEEFPK HHHHCCCCCCHHHHHHHHCHHHHHHHEEHEEEECCCCCCCCCCCCHHHHCCCHHHHHHHH RYSKFGEYSLNSLFELEAGDYHNLNSLEGGYSRGLVRGWEQWNCRFLRNS HHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8451198; 8276869 [H]