Definition Burkholderia phytofirmans PsJN chromosome chromosome 2, complete sequence.
Accession NC_010676
Length 3,625,999

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Identifier: 187921407

GI number:

Start: 3107904

End: 3109949

Strand: Reverse

Name: Not Available

Synonym: Bphyt_6774

Alternate gene names: NA

Gene position: NA

Preceding gene: 187921408

Following gene: 187921406

Centisome position: NA

GC content: NA

Gene sequence:

>2046_bases
ATGACGAAAAAGCTGAACGAAGTACCCGTCGATGACGACGCAACCCAAAGCGAAGAAAGCCCCGCGGCTGCTGCTCCGGC
CAAGGTGGAAAAGGCCAAGGCTCGCGATCGTCGTGCAAAGGAAAAAGCGCTGCTGAAAGACGCTTTCGCGTCGTCACAGC
CGGGCACGGTCGAGGAACTCGAGGAGCGCCGCTCCAAATTGCGCGCGCTGATCAAGCTCGGCAAGGAGCGCGGCTTCCTC
ACGTACGCTGAGATCAACGACCACCTGCCGGACAACTTCACCGAGACCGAGGCGATCGAAGGCATCATCAGCACGTTCAA
CGACATGGGCGTGGCGGTGTACGAGCAGGCCCCGGACGCTGAAACGCTGCTGCTGAACGACAACGCGCCAGCGGCTTCGT
CCGACGACGAAGTGGAAGAGGAAGCGGAAGTTGCGCTGTCCACCGTCGACTCGGAATTCGGCCGCACTACCGACCCGGTC
CGCATGTATATGCGTGAAATGGGCACGGTCGAGCTGCTCACGCGCGAAGGCGAAATCGAAATCGCCAAACGGATCGAAGA
CGGCCTGAAGCACATGGTGATGGCCATCTCCGCATGCCCGACCACGATCGCCGACATCCTGGCGATGGCGGAGCGCGTCG
CGAATGAGGAAATTCGCATCGACGAACTGGTCGACGGCCTGATCGACGCCAACGCGGAAGACGCGGACGGTTTCTCCGCG
CAAGAAGCCGAAGCGATCGAGAGCGAAGACGAAGAAGTCGAAGAAGACTCGGAAGAAGACGAGGAAGAAGACGACGGCAC
GGCGCAAGCCACGGCTAACGCAGCGCAGATGGAAGCGCTCAAGCGTGCGTCGCTCGAAAAATTCGCGATGATCAGCGAAT
GGTTCGACAAGATGCGTCGCGCGTTCGAGAAGGAAGGCTACAAGTCCAAGTCGTATCTGAAGGCACAAGAGACGATCCAG
AATGAGCTCATGACGATCCGCTTCACCGCGCGTACCGTCGAGCGTCTGTGCGACACGCTGCGTGCGCAGGTGGACGAAGT
GCGTCAGGTCGAACGTCAGATTCTGCACACGGTGGTCGACAAGTGCGGCATGCCGCGTGCGGAATTCATCGCGCGCTTCC
CGGGCAGCGAAACGGATCTCGAGTGGGCCGATAAGATCGTCGGTGAAGGTCACGCCTATAGCGCGATCCTCACGCGAAAC
ATTCCGGCTATTCGCGAACAGCAGCAACGTCTGCTGGATCTGCAGGCGCGGGTCGTGCTGCCGTTGAAAGACCTGAAGGA
AACCAACCGTCAGATGGCGGCGGGCGAACTGAAGGCGCGTCAGGCGAAGCGCGAAATGACCGAGGCGAACTTGCGTCTCG
TGATCTCGATCGCGAAGAAGTACACGAACCGTGGTTTGCAGTTCCTGGACCTGATTCAGGAAGGCAACATCGGCCTGATG
AAGGCGGTGGACAAGTTCGAATACCGTCGCGGCTACAAGTTCTCCACGTATGCAACGTGGTGGATCCGTCAGGCCATTAC
GCGTTCGATTGCCGACCAGGCGCGCACGATCCGGATTCCGGTTCACATGATCGAAACGATCAACAAGATGAACCGCATCT
CGCGCCAGATTCTGCAGGAAACCGGTCTCGAGCCGGATCCGGCAACGCTGGCCGAGAAGATGGAAATGCCGGAAGACAAG
ATCCGCAAGATCATGAAGATCGCGAAGGAGCCGATCTCGATGGAAACGCCGATCGGTGACGACGACGATTCGCATCTGGG
CGATTTCATCGAAGACAACAACACGGTTGCGCCGGCCGACGCCGCTTTGCATGCGAGCATGCGCGATGTCGTGAAGGACG
TGCTCGACTCGCTGACTCCGCGTGAAGCGAAGGTGCTGCGCATGCGTTTCGGTATCGAGATGAGCACCGATCACACGCTC
GAAGAAGTCGGCAAGCAGTTCGACGTGACGCGTGAACGGATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAGCTGCGCCA
CCCGAGTCGTTCCGACAAGCTGAAGTCGTTCCTCGAAGGGAATTGA

Upstream 100 bases:

>100_bases
GCAGGACGATGCGGTAGTGCGCGAGGTTCCAGTATCCACGGTTCAACCGGCTGGCGTCCACCAGCCGCGAGTCGAGACTA
CAGCCGGTACGGCGAACTCC

Downstream 100 bases:

>100_bases
TCGAAGCCGGCGTTGGTTGCAAATGATGTAGTGGTCTGCAGGGGCCTCGCGGTTGTTTCGCCGTAGCGAAGCGGTTGCGA
AGGCCCCTTTTTCGTGTAGT

Product: RNA polymerase sigma factor RpoD

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>681_residues
MTKKLNEVPVDDDATQSEESPAAAAPAKVEKAKARDRRAKEKALLKDAFASSQPGTVEELEERRSKLRALIKLGKERGFL
TYAEINDHLPDNFTETEAIEGIISTFNDMGVAVYEQAPDAETLLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPV
RMYMREMGTVELLTREGEIEIAKRIEDGLKHMVMAISACPTTIADILAMAERVANEEIRIDELVDGLIDANAEDADGFSA
QEAEAIESEDEEVEEDSEEDEEEDDGTAQATANAAQMEALKRASLEKFAMISEWFDKMRRAFEKEGYKSKSYLKAQETIQ
NELMTIRFTARTVERLCDTLRAQVDEVRQVERQILHTVVDKCGMPRAEFIARFPGSETDLEWADKIVGEGHAYSAILTRN
IPAIREQQQRLLDLQARVVLPLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLM
KAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGLEPDPATLAEKMEMPEDK
IRKIMKIAKEPISMETPIGDDDDSHLGDFIEDNNTVAPADAALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTL
EEVGKQFDVTRERIRQIEAKALRKLRHPSRSDKLKSFLEGN

Sequences:
NA

Specific function: NA

COG id: COG0568

COG function: function code K; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA