| Definition | Burkholderia phytofirmans PsJN chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_010676 |
| Length | 3,625,999 |
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Identifier: 187921149
GI number:
Start: 2793237
End: 2795702
Strand: Reverse
Name: Not Available
Synonym: Bphyt_6504
Alternate gene names: NA
Gene position: NA
Preceding gene: 187921150
Following gene: 187921148
Centisome position: NA
GC content: NA
Gene sequence:
>2466_bases ATGCGGGCCGACACGAGACACGGTGCGGTCGCCCACCGCGAGGTGGCGATTGCTGACCACATTCCGTATTCAACGCACGT CACGGACCATGTGATCAGGACGCGGGAAGGTGACTACCTGCAGATCTGGAAGCTCGCCGGCATCGCATTCGAGGCCGCCG ATCCGGTGGACATCCTCGTTCGTCACGATGGGTTCAACCAGCTCGTGCGTGCACTGCCTGGTGGTCACGGTGCACTCTGG TCACACCGTCTGCGCCGGCGTGTTTCGGACCACTTTGCCACGCCTTATGGCAACCGCTTCTGCCAGGAGTTGGCGACACG TTACTACGCGAGCTTCGCGGGTTACCGGATGATGGCCAACGAGCTGTATCTGACGCTCGTCTATCGCCCCAACCGCACGA AGCTCGGACGCGTCTTCAGCCGTGCGGCACGCCGCACGCGCGACGACATCCGGCGCGACCAGCAGGAGGCGCTGAAAGTA ATGGACGAACTCGGCGCCCAGGTCGAGTCGGGGCTGAAGCCCTACGACCCGGTGGCGCTTGGGGTCTATCACAGGCCGAG TCCCTTCACGAAGCGGCCGCGCCGGTATTCGTCGGCGCTGGAACTGCTCGGCTATCTCGTCAACGCAGTCTGGGAGCCTG AGCCGGTTCCTTCTGGCGTGATTCGGGAGGCATTGCCGACTTCCCGTCTGTTCGTGGGTGTAGAAAATGTCGAGATCCGC ATGCCAGCCATGACGCGCTACGCCGCGCTGTTGGACCTGAAGGACTATCCTGAAGAGACCGAGCCGGGGATGCTCAATGG CCTACTGTATGGCGATTTCGAGTACATCGAGACACAAAGCTTCACGATCCTCGACAAACCTGGCGCGAAGGAAGCGTTAG AGCGTCAGCGCAACCAGCTGATCGCTGGCGAGGATGTGGCCGTCTCCCAGGTCGAGGCGATGGATCGTGCGCTCAACGAC CTGATCAACGGCGATTTCGTGCTGGGTGAGTATCACTATTCGCTCGCGGTGCTGGCCGATACGCCCGCGGCGGTCTCGAA GCACGTGGCGAAGGCCCGCACGCAACTCGCCGATGGCGGTTTCCAGACCACCCTTATCGATCTCGTGGCGGACGCTGCAT GGTTCGCACAGTTGCCGGGCAACTGGCGTTACCGGCCGCGCGAAGCGAAGCTGACGTCCCGCAATTTCTGTGGTCTTGCC AGTCTTCACAATTTCGCAACCGGCAAACGCGACGGCAATCCGTGGGGCGAGGCGATCACGATCGTCAAGACGCCGAGCGG CCAGCCGCTTTACCTGAATTTCCACGTTACGCCCGAGAAGCAGGATTCAGCCGACGAGAAGGCGCTTGCCAATACCCAGA TCATCGGTCAGGCCGGTGCGGGCAAGACGGTCCTCGAACTGTTTCTGCTGGCGATGGCGACGAAGTTCGGGCTGACCGCG GTGCTGTATGACAAGGATCGCGGCACCGAGATCGCGATCCGTGCCATGGGCGGCATCTATACGGTGTTCCGCCGTGGCGA ACCGACGGGGCTCAATCCGTTCCAGATGACGCCGGACGAATCGGTGCTGGACTTCTGGGAGCGGCTGGTGCGCAAGCTCG TCGATACGGGTGTGCCGTTGTCTGCCAAAGACGAATTGGACATCTCGCGTGCGGTGCGTGAAGTCTCCCGCATGGAAAAG CCGTTGCGCCGCCTGTCGATGGTGCGACAACTGTTGCCGAATGTGGGCGAGAACAGTCTGCACGCACGTCTCGCGAAATG GTGTGCAGGCGGGCGACTGGGCTGGGTCCTCGACAACCCGAGAGACACCGTGGACCTCGCACGCTCGAAGCTCTTCGGCT TCGACGATACCGAACTGCTCGATGACACGGAGGTTTCGACGCCCGTCACGATGTACCTGCTTCACCTGACGGAAAGCCTG ATCGATGGCCGGCGCTTCATCTATGTGATGACCGAATTCTGGAAGCGGCTGGGGGACCCCGTCTTCACGGACTTCGCGAA GAACAAACAGAAGACGATTCGCAAGCAGAACGGGCTCGGCATTTTCGATACCCAGTCACCGGCGGATATGCTGCGCAGCG ATATCGCACGGGCACTGATCGAACAGAGTGCGACGTTCTTCTTCCTGCCGAATCCGCGGGCCGACTACGACGACTACGTG CATGGCTTCAAGCTGACGGAAGCCGAATTCAACATCGTGCGTAGTCTCGGCGAGAACAGCCGCATGTTTCTGATCAAGCA AGGGCATCGGTCGGCGATCGGGAAACTCGATCTCGCTGGGCTCGGCGATGTGCTCGATGTCCTCTCGGGTACGACCGACA ACATCCAACTCCTCGACACGATCCGTGCTCAGGCGGGGGACGACCCCGAGGTATGGCTGCCGGTCTTCCATGCGCAACTG GCGAAGCGTCGGGCGACCCAGACAACCCGGCAAACCCAAGCACCCCGTGCAGGAGGTGCGCAATGA
Upstream 100 bases:
>100_bases CAGTACGCACTGCGCCTGCGCATGGTCCTGCGGCAGGGCAATCGCCGCTTCTGGGGTATGCACGCCTACACGCCGGTTCG CCTGAAGAGGAGGACCTGAC
Downstream 100 bases:
>100_bases GCGGCCTCTTTACCGCGGTTGGCGGCACGCTCGAGAACGGCATGTCGACCTACGTGACGAACGTCTCGTCGGCGCTGTCG GCCGCGCTCGTTCCCGTCGT
Product: type IV secretion/conjugal transfer ATPase, VirB4 family
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>821_residues MRADTRHGAVAHREVAIADHIPYSTHVTDHVIRTREGDYLQIWKLAGIAFEAADPVDILVRHDGFNQLVRALPGGHGALW SHRLRRRVSDHFATPYGNRFCQELATRYYASFAGYRMMANELYLTLVYRPNRTKLGRVFSRAARRTRDDIRRDQQEALKV MDELGAQVESGLKPYDPVALGVYHRPSPFTKRPRRYSSALELLGYLVNAVWEPEPVPSGVIREALPTSRLFVGVENVEIR MPAMTRYAALLDLKDYPEETEPGMLNGLLYGDFEYIETQSFTILDKPGAKEALERQRNQLIAGEDVAVSQVEAMDRALND LINGDFVLGEYHYSLAVLADTPAAVSKHVAKARTQLADGGFQTTLIDLVADAAWFAQLPGNWRYRPREAKLTSRNFCGLA SLHNFATGKRDGNPWGEAITIVKTPSGQPLYLNFHVTPEKQDSADEKALANTQIIGQAGAGKTVLELFLLAMATKFGLTA VLYDKDRGTEIAIRAMGGIYTVFRRGEPTGLNPFQMTPDESVLDFWERLVRKLVDTGVPLSAKDELDISRAVREVSRMEK PLRRLSMVRQLLPNVGENSLHARLAKWCAGGRLGWVLDNPRDTVDLARSKLFGFDDTELLDDTEVSTPVTMYLLHLTESL IDGRRFIYVMTEFWKRLGDPVFTDFAKNKQKTIRKQNGLGIFDTQSPADMLRSDIARALIEQSATFFFLPNPRADYDDYV HGFKLTEAEFNIVRSLGENSRMFLIKQGHRSAIGKLDLAGLGDVLDVLSGTTDNIQLLDTIRAQAGDDPEVWLPVFHAQL AKRRATQTTRQTQAPRAGGAQ
Sequences:
NA
Specific function: NA
COG id: COG3451
COG function: function code U; Type IV secretory pathway, VirB4 components
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA