| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187918665
Identifier: 187918665
GI number: 187918665
Start: 871124
End: 872548
Strand: Direct
Name: 187918665
Synonym: BH0811
Alternate gene names: NA
Gene position: 871124-872548 (Clockwise)
Preceding gene: 187918664
Following gene: 187918702
Centisome position: 94.45
GC content: 30.25
Gene sequence:
>1425_bases ATGAGAGAGTTTATTCTTTTATTTTGTATTGTGCTTGATCTTTTTGCTATTAAGGAGTTAACATTATCAACTAAATCTTT AGTTACGACCCAGGAGTCTGAGACTAGTACTGATAAGGATATGAAGGAAAATAATGTTGAGAGGGATGTTACTAGTGAGT CTGAGTTTAAAAGTGTTAACTTAGATGTGAAGCAGGTAAATGATGTTATTTCTTATGGACTTGATACTCAAGTTATTGAA ATTATTGGCAGTCTTAAAAAATCAGGTGATGGTGAATACAATGCTTTGCTTGAAAAGAGATTGCAGAAAACTTTTAATAT TGATCTTAAACGAGCAATTCTTGAGTTGTTTTTATCACTTAAATATGCAGGTGGTGTTGATGCTGCTAATTATATTCTAG ATAGTTATGAGAGTAATAGATATCCTAACAATTTGATTAATTTAGCAATTTCATATCTTAAGGAATTTGGTGAAAAGGAT GCTTTAAAAAAAACTCTTATTGGTATTCTTGAAAATAAGGAAGGGAATATCGTAGCTACTGCTGCTTATTATCTTGGTGA GCTTTCTTCTCCTGAATATTCAAAAGATATGATGGATGTTTATGATAAATATTCTGCTAATGATGGAGCTAAGTCGGCGA TACTTATTGCTCTTGGCAAATCTAATGCTGTTGATTATGTAGATAGATTTTATGAAATTTCTGTTGATAGTTATGAAAAT CCATCAATTAAGGCTTCAGCTATTAGAGCATTATCATATCTTATGCCTGAGAAAATAACAGAGAATGCCAATTTATATCT TCAGAATAATAATAACAATTATAATATTAAGATTGCCATTGTAAGGGCACTCTCAAAGGATATATCTCTAAAATCAAAAG AGATTTTGCATGATTTTTTAAGAGATTCTGATGCTAGCATTAGGATTGGTGCTATTGAGGCTATTAAAGAGCATAATGAT ATTGCTTCAAAAGAGGTATTAATTTATAAGTTAAAAAGCGATCCTTCCTTAAAGGTCAGGGAATCATCTGGTAAGGCTTT AGTAGATATGGGGTCTGGATATGAAGAGATACAAAACATAATGCTTGATTCTAGTATTGAAAATAACTTTAAACTTACTA TATTTAGTTATCTTTTAGATAAAGATGTAAATTCTGCACGTTTGATTGCTTTAAATCTCTTAGAAAAGGAAAATATTAAT AAACCTTCAAAGTTGCTTACAAATATTTCTATGCTTCTTTCAGTTAGGAAGGGTAATTTTGATGATTTTTATTCTAGGAT TATTGAGAGTAAAAATGTTGATTTAATGAATCTTGCAATTAGGGGAGCTGTTTATAATAAATCCCCATCACTCTCGGGCA AACTTAAAGAGATCAAAAGAACAACTAGTTCAGGGTATTTAAGGAAACTTTTGACAAATTATTGA
Upstream 100 bases:
>100_bases TGTTAAGTGTTGCAGGTATAATTAATATTATTATTTTAATATTATGTTATTATTTGCTTGGTGTTAGTAAGATTTTTAAG TTTATTAGTAGGGAGATTGC
Downstream 100 bases:
>100_bases TATAAAATTTTCAAAATCTCTGTTGCCGTTTCTTTTTTTGACATTTCAGGGAGTTCTTTAACGCTGTCTTTATTTATTAT GTAAATTTTGTTTAAGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: PBS Lyase HEAT-Like Repeat Domain-Containing Protein
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MREFILLFCIVLDLFAIKELTLSTKSLVTTQESETSTDKDMKENNVERDVTSESEFKSVNLDVKQVNDVISYGLDTQVIE IIGSLKKSGDGEYNALLEKRLQKTFNIDLKRAILELFLSLKYAGGVDAANYILDSYESNRYPNNLINLAISYLKEFGEKD ALKKTLIGILENKEGNIVATAAYYLGELSSPEYSKDMMDVYDKYSANDGAKSAILIALGKSNAVDYVDRFYEISVDSYEN PSIKASAIRALSYLMPEKITENANLYLQNNNNNYNIKIAIVRALSKDISLKSKEILHDFLRDSDASIRIGAIEAIKEHND IASKEVLIYKLKSDPSLKVRESSGKALVDMGSGYEEIQNIMLDSSIENNFKLTIFSYLLDKDVNSARLIALNLLEKENIN KPSKLLTNISMLLSVRKGNFDDFYSRIIESKNVDLMNLAIRGAVYNKSPSLSGKLKEIKRTTSSGYLRKLLTNY
Sequences:
>Translated_474_residues MREFILLFCIVLDLFAIKELTLSTKSLVTTQESETSTDKDMKENNVERDVTSESEFKSVNLDVKQVNDVISYGLDTQVIE IIGSLKKSGDGEYNALLEKRLQKTFNIDLKRAILELFLSLKYAGGVDAANYILDSYESNRYPNNLINLAISYLKEFGEKD ALKKTLIGILENKEGNIVATAAYYLGELSSPEYSKDMMDVYDKYSANDGAKSAILIALGKSNAVDYVDRFYEISVDSYEN PSIKASAIRALSYLMPEKITENANLYLQNNNNNYNIKIAIVRALSKDISLKSKEILHDFLRDSDASIRIGAIEAIKEHND IASKEVLIYKLKSDPSLKVRESSGKALVDMGSGYEEIQNIMLDSSIENNFKLTIFSYLLDKDVNSARLIALNLLEKENIN KPSKLLTNISMLLSVRKGNFDDFYSRIIESKNVDLMNLAIRGAVYNKSPSLSGKLKEIKRTTSSGYLRKLLTNY >Mature_474_residues MREFILLFCIVLDLFAIKELTLSTKSLVTTQESETSTDKDMKENNVERDVTSESEFKSVNLDVKQVNDVISYGLDTQVIE IIGSLKKSGDGEYNALLEKRLQKTFNIDLKRAILELFLSLKYAGGVDAANYILDSYESNRYPNNLINLAISYLKEFGEKD ALKKTLIGILENKEGNIVATAAYYLGELSSPEYSKDMMDVYDKYSANDGAKSAILIALGKSNAVDYVDRFYEISVDSYEN PSIKASAIRALSYLMPEKITENANLYLQNNNNNYNIKIAIVRALSKDISLKSKEILHDFLRDSDASIRIGAIEAIKEHND IASKEVLIYKLKSDPSLKVRESSGKALVDMGSGYEEIQNIMLDSSIENNFKLTIFSYLLDKDVNSARLIALNLLEKENIN KPSKLLTNISMLLSVRKGNFDDFYSRIIESKNVDLMNLAIRGAVYNKSPSLSGKLKEIKRTTSSGYLRKLLTNY
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53332; Mature: 53332
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREFILLFCIVLDLFAIKELTLSTKSLVTTQESETSTDKDMKENNVERDVTSESEFKSVN CHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCCCCHHHHHCCCCCCCCCCCHHHCCC LDVKQVNDVISYGLDTQVIEIIGSLKKSGDGEYNALLEKRLQKTFNIDLKRAILELFLSL CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH KYAGGVDAANYILDSYESNRYPNNLINLAISYLKEFGEKDALKKTLIGILENKEGNIVAT HHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEE AAYYLGELSSPEYSKDMMDVYDKYSANDGAKSAILIALGKSNAVDYVDRFYEISVDSYEN HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHEEECCCCCC PSIKASAIRALSYLMPEKITENANLYLQNNNNNYNIKIAIVRALSKDISLKSKEILHDFL CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEHHHHCCCCHHHHHHHHHH RDSDASIRIGAIEAIKEHNDIASKEVLIYKLKSDPSLKVRESSGKALVDMGSGYEEIQNI CCCCCCEEEHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCEEEECCCCHHHHHHH MLDSSIENNFKLTIFSYLLDKDVNSARLIALNLLEKENINKPSKLLTNISMLLSVRKGNF HHCCCCCCCEEEEHHHHHHHCCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCH DDFYSRIIESKNVDLMNLAIRGAVYNKSPSLSGKLKEIKRTTSSGYLRKLLTNY HHHHHHHHCCCCCCEEEEEEECEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MREFILLFCIVLDLFAIKELTLSTKSLVTTQESETSTDKDMKENNVERDVTSESEFKSVN CHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCCCCHHHHHCCCCCCCCCCCHHHCCC LDVKQVNDVISYGLDTQVIEIIGSLKKSGDGEYNALLEKRLQKTFNIDLKRAILELFLSL CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH KYAGGVDAANYILDSYESNRYPNNLINLAISYLKEFGEKDALKKTLIGILENKEGNIVAT HHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEE AAYYLGELSSPEYSKDMMDVYDKYSANDGAKSAILIALGKSNAVDYVDRFYEISVDSYEN HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHEEECCCCCC PSIKASAIRALSYLMPEKITENANLYLQNNNNNYNIKIAIVRALSKDISLKSKEILHDFL CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEHHHHCCCCHHHHHHHHHH RDSDASIRIGAIEAIKEHNDIASKEVLIYKLKSDPSLKVRESSGKALVDMGSGYEEIQNI CCCCCCEEEHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCEEEECCCCHHHHHHH MLDSSIENNFKLTIFSYLLDKDVNSARLIALNLLEKENINKPSKLLTNISMLLSVRKGNF HHCCCCCCCEEEEHHHHHHHCCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCH DDFYSRIIESKNVDLMNLAIRGAVYNKSPSLSGKLKEIKRTTSSGYLRKLLTNY HHHHHHHHCCCCCCEEEEEEECEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA