| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187918644
Identifier: 187918644
GI number: 187918644
Start: 842383
End: 843489
Strand: Direct
Name: 187918644
Synonym: BH0791
Alternate gene names: NA
Gene position: 842383-843489 (Clockwise)
Preceding gene: 187918643
Following gene: 187918647
Centisome position: 91.33
GC content: 28.55
Gene sequence:
>1107_bases ATGAGCTTTTATTTGAAATTAGTTAGTGGAGATACTGAGTCCAAACTTGATAATATTGTTTCTATTAGTCATTTTGATTT TCAAGATAATTTAAATTTAATGCTTATAATTGGTCCTATGGGTAGCGGTAAGACAGAATATGCTGCTAAGATTTATAAAG ATTCTCTTATTATTAAGAATAAATCTCCTAAAGTGTTAAATTCTATTACCAAGGGACGTAGAAACAGAGCTAATGTATTT TTTATTAGAAATATTCTTGATAAGAAAAGATTTAAAAATTATCCTCTAAATGTTATTCCTTATAGGGGAGGTGGGAGTGA TAGGGTTGATGGAGTTGATTTTGCAGGTAGTTCTTTTGATGTAGGCCAATTAATAGATGAAAATCCTGAATATGGGACTT TTATTATTGATGAAACTTGTTTTTATGATGAGCGTTTGGTTTTTATTTTAAATAAAATCGCATTGGATTCAAATGTATTA TTTATACTTCCTACTTTACTTTATAATTTTAGAAAAGAAATGTTTAATAATACTGCTAAACTTTTAATAGAATATTCAGA TAAGATTTGTCGTCTTGGTGCTTATTGTGAGCATGTTGATTGTATGGATGAATCTTTCTTAACATACAGATATTATTTTT ATGGAGGAAAGGAAATAGCTGCACCCTATTTTGATCCTTTGTTGATTGTTGGTGGTGATGAGATTGTTGAGTCTGCTATT TATCCAAATTATGCTACAAGGTGTTCTAGGCATCATTATCTTGTTGGTAGAGAATATTTTTTTACTGTTCTTAAACCTTT TGCATTATTGTATGCTCAAGGTGATAAAAAATTGCTTGAGAGAGAAATCGTGGATTTAAGCAGTAATGCGAGGAATGCAA ATTTTGAAAATTCTCTTTTGATTGAATCTAGAGGAAGATATGATATTGCGGTTTTGGAAAATTTGTTAAAATTACCTTTT TTAGCAGAGAGAGCTTTAATTACACTTTCATTGGAATGTAATATTCTTAGTAAGAGAAATTTGAAAGAGCTTATTGATAA ATTTTCTCTTAGTAAGGATTATATTCAAAAAGTAATTGTTTCAAAAGAGCATAAATGGATTTTTTAA
Upstream 100 bases:
>100_bases TGTTTTCAGGATATTTAGGAGCTCCTTTGCAGCTTGTTATTCCCTTTGATTCTCTTATTTTTGTATAAAAAATTATTTAG TATGTTTGGAGTTGATTTTA
Downstream 100 bases:
>100_bases AAAATATTAATAATAATTTGGTCTTTTTTGAAAGAACTCTTTTGTTTTTTCTATACGTATTAATTCTCTTTTGATTATGT CATAGTAGTTAAGTTCTTTC
Product: thymidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSFYLKLVSGDTESKLDNIVSISHFDFQDNLNLMLIIGPMGSGKTEYAAKIYKDSLIIKNKSPKVLNSITKGRRNRANVF FIRNILDKKRFKNYPLNVIPYRGGGSDRVDGVDFAGSSFDVGQLIDENPEYGTFIIDETCFYDERLVFILNKIALDSNVL FILPTLLYNFRKEMFNNTAKLLIEYSDKICRLGAYCEHVDCMDESFLTYRYYFYGGKEIAAPYFDPLLIVGGDEIVESAI YPNYATRCSRHHYLVGREYFFTVLKPFALLYAQGDKKLLEREIVDLSSNARNANFENSLLIESRGRYDIAVLENLLKLPF LAERALITLSLECNILSKRNLKELIDKFSLSKDYIQKVIVSKEHKWIF
Sequences:
>Translated_368_residues MSFYLKLVSGDTESKLDNIVSISHFDFQDNLNLMLIIGPMGSGKTEYAAKIYKDSLIIKNKSPKVLNSITKGRRNRANVF FIRNILDKKRFKNYPLNVIPYRGGGSDRVDGVDFAGSSFDVGQLIDENPEYGTFIIDETCFYDERLVFILNKIALDSNVL FILPTLLYNFRKEMFNNTAKLLIEYSDKICRLGAYCEHVDCMDESFLTYRYYFYGGKEIAAPYFDPLLIVGGDEIVESAI YPNYATRCSRHHYLVGREYFFTVLKPFALLYAQGDKKLLEREIVDLSSNARNANFENSLLIESRGRYDIAVLENLLKLPF LAERALITLSLECNILSKRNLKELIDKFSLSKDYIQKVIVSKEHKWIF >Mature_367_residues SFYLKLVSGDTESKLDNIVSISHFDFQDNLNLMLIIGPMGSGKTEYAAKIYKDSLIIKNKSPKVLNSITKGRRNRANVFF IRNILDKKRFKNYPLNVIPYRGGGSDRVDGVDFAGSSFDVGQLIDENPEYGTFIIDETCFYDERLVFILNKIALDSNVLF ILPTLLYNFRKEMFNNTAKLLIEYSDKICRLGAYCEHVDCMDESFLTYRYYFYGGKEIAAPYFDPLLIVGGDEIVESAIY PNYATRCSRHHYLVGREYFFTVLKPFALLYAQGDKKLLEREIVDLSSNARNANFENSLLIESRGRYDIAVLENLLKLPFL AERALITLSLECNILSKRNLKELIDKFSLSKDYIQKVIVSKEHKWIF
Specific function: Unknown
COG id: COG1435
COG function: function code F; Thymidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42444; Mature: 42313
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFYLKLVSGDTESKLDNIVSISHFDFQDNLNLMLIIGPMGSGKTEYAAKIYKDSLIIKN CCEEEEEECCCCHHHHHHEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCEEEEEC KSPKVLNSITKGRRNRANVFFIRNILDKKRFKNYPLNVIPYRGGGSDRVDGVDFAGSSFD CCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCCCCCC VGQLIDENPEYGTFIIDETCFYDERLVFILNKIALDSNVLFILPTLLYNFRKEMFNNTAK HHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH LLIEYSDKICRLGAYCEHVDCMDESFLTYRYYFYGGKEIAAPYFDPLLIVGGDEIVESAI EEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEECCCCCCCEEEECCHHHHHHHC YPNYATRCSRHHYLVGREYFFTVLKPFALLYAQGDKKLLEREIVDLSSNARNANFENSLL CCCHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEE IESRGRYDIAVLENLLKLPFLAERALITLSLECNILSKRNLKELIDKFSLSKDYIQKVIV EECCCCEEHHHHHHHHHCCHHHCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHH SKEHKWIF CCCCCCCC >Mature Secondary Structure SFYLKLVSGDTESKLDNIVSISHFDFQDNLNLMLIIGPMGSGKTEYAAKIYKDSLIIKN CEEEEEECCCCHHHHHHEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCEEEEEC KSPKVLNSITKGRRNRANVFFIRNILDKKRFKNYPLNVIPYRGGGSDRVDGVDFAGSSFD CCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCCCCCC VGQLIDENPEYGTFIIDETCFYDERLVFILNKIALDSNVLFILPTLLYNFRKEMFNNTAK HHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH LLIEYSDKICRLGAYCEHVDCMDESFLTYRYYFYGGKEIAAPYFDPLLIVGGDEIVESAI EEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEECCCCCCCEEEECCHHHHHHHC YPNYATRCSRHHYLVGREYFFTVLKPFALLYAQGDKKLLEREIVDLSSNARNANFENSLL CCCHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEE IESRGRYDIAVLENLLKLPFLAERALITLSLECNILSKRNLKELIDKFSLSKDYIQKVIV EECCCCEEHHHHHHHHHCCHHHCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHH SKEHKWIF CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA