| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187918642
Identifier: 187918642
GI number: 187918642
Start: 839218
End: 840696
Strand: Direct
Name: 187918642
Synonym: BH0790
Alternate gene names: NA
Gene position: 839218-840696 (Clockwise)
Preceding gene: 187918641
Following gene: 187918643
Centisome position: 90.99
GC content: 25.96
Gene sequence:
>1479_bases ATGGTTGTCTTAAAAATTATGTTTCTACTTTTATTTTTAGTAAACTTAGATGCTAAATTAAAAGAGAGAGACAAGGATAT ATCAGAAATTCTTTTTATTAAAGCTAAAAGTTTTGATGGTACTCAAAGAGGACTTGATATGATTTATGGTTCTCTTGAGT TTAGTTTAAAAAATTCAGATTCTCTTTATGAACTTTCATTGAGGAATGATATTTCATTGTTAGATAGAATTTATTTGTTA AAGGCCGCAATAGATATCAATAATTTTGCGTTTGTAAAGCCTAGGGCTTTATATTATCAATATTTTTCATTGATTCTAAG TCAAAATGAGGATATTGATAAAAATAGGGAAATTATTGATATTTACGATAAACTAGACAGTGACTTGCAGAATGATAAAG ACTTGATTTACATGCGGCTTGAAGCTTCTAGTAGACTTGGAGATTTTAAGGGAAGTTTTAGTAAAGTGTTAGCAAATTCT TTTGCTGTGTATAGTGATGATTTAAGGTTTTTTAAATGGTTTTTAAAGGAAGATAAATTTTTTCCAAGTCTTTTTAGTAA ACTTAAATTAAAAGAAGATTCTTTTTTCAATAGTAACAATATTGATTTTATTTTTAAAAATACAACGTTAAATGAACCTA ATTCTGTTGCTTTATTTACTTTTTTAAAAAATAAGAGTAAGAAATTAAATGGTGTTCAGAGTATATATTTACTTAAATAT AAACTCTTAACACCTGATGAAGCTTATCTATTTTTTAAAGAATCTCCCCCTGAAATAATAGGTGAATATAAGATGTTTTA TGATCTCTTAAGAGATCCTATTATACGAGATGAATTTTTAAGTCGTTATAAAAATTTGTCCGGTATGTATTTTGTGAATG ATAAAAATAATGCTGCAGTATTTGAGAATGGAGTTTTGGTAAGTTTTTTTTCAAAAATAGTGGACTATTCTACGGATGTA AACTTAGGTGAGAAGTATTTTAATAAGGTTGATTTTAAAGATAAAGTTCCTGTTCGTTATGAGAATGACTTGCTTGGTTA TAAAGTTAGTTATTCTGTTTATCCTTATGTCAGTATGATTGAAGTTGACTACCCAGATAAAAAAAATGTATATACTTTTG CTTTAAATTCTTTTCGGTATGAGATTTTTGATGGTTTTGGTTATAAATTTGATTATGTGGGCATTAATGAATTTTTAGTA GCCAATGTTCCAGAAATTTTTCTTCCTAGTATGTTAAGTTTAAATCCAAAACGAGTTTCTGTTTTAAATATTCAAAAAAG TTTAATAGAGAAAAAAACCTTTAACAATTCTGATGTTATTGAAGTTAAGAATTATTCTTTTGGTGATCTGATTTCAGTTT ATAGAAAGATTAATGGATCTAAGAAGTTTAATTATGTTGAAATTTATGACAAAGGGGTTTTAAAAGTTAAGAGAGTTATT TTAGATGATAGTTTTGATATCTATCATAACGTTAATTAG
Upstream 100 bases:
>100_bases GCTTTTAGGATTTGAAATAATTGAGAGTGATCATGAAAAAAGTTTAAAAGAGCCTAAACTGGAGACAGTCAATGTATAAG TAAAATTTTTAAGGGGTCTT
Downstream 100 bases:
>100_bases CTTTTGAGAATTATTGATGCATAGAAAAATTTTTATTATTTTTATGTTAATTTTTTCATGCAGTACAATAAAAGACATAG ATGACAAACGAATTTATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MVVLKIMFLLLFLVNLDAKLKERDKDISEILFIKAKSFDGTQRGLDMIYGSLEFSLKNSDSLYELSLRNDISLLDRIYLL KAAIDINNFAFVKPRALYYQYFSLILSQNEDIDKNREIIDIYDKLDSDLQNDKDLIYMRLEASSRLGDFKGSFSKVLANS FAVYSDDLRFFKWFLKEDKFFPSLFSKLKLKEDSFFNSNNIDFIFKNTTLNEPNSVALFTFLKNKSKKLNGVQSIYLLKY KLLTPDEAYLFFKESPPEIIGEYKMFYDLLRDPIIRDEFLSRYKNLSGMYFVNDKNNAAVFENGVLVSFFSKIVDYSTDV NLGEKYFNKVDFKDKVPVRYENDLLGYKVSYSVYPYVSMIEVDYPDKKNVYTFALNSFRYEIFDGFGYKFDYVGINEFLV ANVPEIFLPSMLSLNPKRVSVLNIQKSLIEKKTFNNSDVIEVKNYSFGDLISVYRKINGSKKFNYVEIYDKGVLKVKRVI LDDSFDIYHNVN
Sequences:
>Translated_492_residues MVVLKIMFLLLFLVNLDAKLKERDKDISEILFIKAKSFDGTQRGLDMIYGSLEFSLKNSDSLYELSLRNDISLLDRIYLL KAAIDINNFAFVKPRALYYQYFSLILSQNEDIDKNREIIDIYDKLDSDLQNDKDLIYMRLEASSRLGDFKGSFSKVLANS FAVYSDDLRFFKWFLKEDKFFPSLFSKLKLKEDSFFNSNNIDFIFKNTTLNEPNSVALFTFLKNKSKKLNGVQSIYLLKY KLLTPDEAYLFFKESPPEIIGEYKMFYDLLRDPIIRDEFLSRYKNLSGMYFVNDKNNAAVFENGVLVSFFSKIVDYSTDV NLGEKYFNKVDFKDKVPVRYENDLLGYKVSYSVYPYVSMIEVDYPDKKNVYTFALNSFRYEIFDGFGYKFDYVGINEFLV ANVPEIFLPSMLSLNPKRVSVLNIQKSLIEKKTFNNSDVIEVKNYSFGDLISVYRKINGSKKFNYVEIYDKGVLKVKRVI LDDSFDIYHNVN >Mature_492_residues MVVLKIMFLLLFLVNLDAKLKERDKDISEILFIKAKSFDGTQRGLDMIYGSLEFSLKNSDSLYELSLRNDISLLDRIYLL KAAIDINNFAFVKPRALYYQYFSLILSQNEDIDKNREIIDIYDKLDSDLQNDKDLIYMRLEASSRLGDFKGSFSKVLANS FAVYSDDLRFFKWFLKEDKFFPSLFSKLKLKEDSFFNSNNIDFIFKNTTLNEPNSVALFTFLKNKSKKLNGVQSIYLLKY KLLTPDEAYLFFKESPPEIIGEYKMFYDLLRDPIIRDEFLSRYKNLSGMYFVNDKNNAAVFENGVLVSFFSKIVDYSTDV NLGEKYFNKVDFKDKVPVRYENDLLGYKVSYSVYPYVSMIEVDYPDKKNVYTFALNSFRYEIFDGFGYKFDYVGINEFLV ANVPEIFLPSMLSLNPKRVSVLNIQKSLIEKKTFNNSDVIEVKNYSFGDLISVYRKINGSKKFNYVEIYDKGVLKVKRVI LDDSFDIYHNVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57684; Mature: 57684
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVLKIMFLLLFLVNLDAKLKERDKDISEILFIKAKSFDGTQRGLDMIYGSLEFSLKNSD CHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHEEEEEEEECCCC SLYELSLRNDISLLDRIYLLKAAIDINNFAFVKPRALYYQYFSLILSQNEDIDKNREIID CEEEEECCCCHHHHHHHHHHHHHEECCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEE IYDKLDSDLQNDKDLIYMRLEASSRLGDFKGSFSKVLANSFAVYSDDLRFFKWFLKEDKF HHHHHCHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHEECCHHHHHHHHHHCCCC FPSLFSKLKLKEDSFFNSNNIDFIFKNTTLNEPNSVALFTFLKNKSKKLNGVQSIYLLKY CHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCHHHCCHHEEEEEEE KLLTPDEAYLFFKESPPEIIGEYKMFYDLLRDPIIRDEFLSRYKNLSGMYFVNDKNNAAV EEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEE FENGVLVSFFSKIVDYSTDVNLGEKYFNKVDFKDKVPVRYENDLLGYKVSYSVYPYVSMI EECCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCEEEEEEECCEEEEE EVDYPDKKNVYTFALNSFRYEIFDGFGYKFDYVGINEFLVANVPEIFLPSMLSLNPKRVS EECCCCCCCEEEEEEECEEEEEECCCCCEEEEECCCHHHHCCCCHHHCCHHHCCCCCCEE VLNIQKSLIEKKTFNNSDVIEVKNYSFGDLISVYRKINGSKKFNYVEIYDKGVLKVKRVI EEHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH LDDSFDIYHNVN HCCCCCEEECCC >Mature Secondary Structure MVVLKIMFLLLFLVNLDAKLKERDKDISEILFIKAKSFDGTQRGLDMIYGSLEFSLKNSD CHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHEEEEEEEECCCC SLYELSLRNDISLLDRIYLLKAAIDINNFAFVKPRALYYQYFSLILSQNEDIDKNREIID CEEEEECCCCHHHHHHHHHHHHHEECCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEE IYDKLDSDLQNDKDLIYMRLEASSRLGDFKGSFSKVLANSFAVYSDDLRFFKWFLKEDKF HHHHHCHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHEECCHHHHHHHHHHCCCC FPSLFSKLKLKEDSFFNSNNIDFIFKNTTLNEPNSVALFTFLKNKSKKLNGVQSIYLLKY CHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCHHHCCHHEEEEEEE KLLTPDEAYLFFKESPPEIIGEYKMFYDLLRDPIIRDEFLSRYKNLSGMYFVNDKNNAAV EEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEE FENGVLVSFFSKIVDYSTDVNLGEKYFNKVDFKDKVPVRYENDLLGYKVSYSVYPYVSMI EECCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCEEEEEEECCEEEEE EVDYPDKKNVYTFALNSFRYEIFDGFGYKFDYVGINEFLVANVPEIFLPSMLSLNPKRVS EECCCCCCCEEEEEEECEEEEEECCCCCEEEEECCCHHHHCCCCHHHCCHHHCCCCCCEE VLNIQKSLIEKKTFNNSDVIEVKNYSFGDLISVYRKINGSKKFNYVEIYDKGVLKVKRVI EEHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH LDDSFDIYHNVN HCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA