| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
Click here to switch to the map view.
The map label for this gene is 187918632
Identifier: 187918632
GI number: 187918632
Start: 830562
End: 830894
Strand: Direct
Name: 187918632
Synonym: BH0779
Alternate gene names: NA
Gene position: 830562-830894 (Clockwise)
Preceding gene: 187918631
Following gene: 187918633
Centisome position: 90.05
GC content: 26.13
Gene sequence:
>333_bases GTGATTAATGTTTTAATAAAGACCCGTAATAATATAATTATTTATATTTTGGCTAATGGACATGCTAGAGGGAATAATTA TATTAATATAGTTTGTTCTTCCTTTTCTTTTATTTTAAGAACTTTTTTAAGTGTTCTTGATTGTGAGAAAGAGGATTTTA TTGTAGATAATTCTTTAAGAGGTTACTTGGAATTTAAGGCTTCTTTTAGAAGTTTGGATAAGCAGAGCCTTTTTTATTAT AGTAAGTTTTTAATACAAGGTGTAAAGGATTTGTGCTTTGAATATCCTTATGATATTAAATTAATTTTGGAGGAAACTAG TGGCAACAAGTAA
Upstream 100 bases:
>100_bases TTATCTCTTACAGATATAGAAGAAGAAAGTCAAGCGAGCGAAAGATCGGACATCGTCAATCTTATTCTTATGTTTTGGTT GATGATATAATTGTTAGTTA
Downstream 100 bases:
>100_bases AAGTGGTGGTAGCTCTAAGAATGGAAGGGATTCTATATCTAAGAGGCTTGGTGTTAAGAGAAGTGGTGGGCAATTTGTGA GAGCTGGGGAAATAATTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MINVLIKTRNNIIIYILANGHARGNNYINIVCSSFSFILRTFLSVLDCEKEDFIVDNSLRGYLEFKASFRSLDKQSLFYY SKFLIQGVKDLCFEYPYDIKLILEETSGNK
Sequences:
>Translated_110_residues MINVLIKTRNNIIIYILANGHARGNNYINIVCSSFSFILRTFLSVLDCEKEDFIVDNSLRGYLEFKASFRSLDKQSLFYY SKFLIQGVKDLCFEYPYDIKLILEETSGNK >Mature_110_residues MINVLIKTRNNIIIYILANGHARGNNYINIVCSSFSFILRTFLSVLDCEKEDFIVDNSLRGYLEFKASFRSLDKQSLFYY SKFLIQGVKDLCFEYPYDIKLILEETSGNK
Specific function: Unknown
COG id: COG2868
COG function: function code J; Predicted ribosomal protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12825; Mature: 12825
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINVLIKTRNNIIIYILANGHARGNNYINIVCSSFSFILRTFLSVLDCEKEDFIVDNSLR CEEEEEEECCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCEEECCCCC GYLEFKASFRSLDKQSLFYYSKFLIQGVKDLCFEYPYDIKLILEETSGNK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC >Mature Secondary Structure MINVLIKTRNNIIIYILANGHARGNNYINIVCSSFSFILRTFLSVLDCEKEDFIVDNSLR CEEEEEEECCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCEEECCCCC GYLEFKASFRSLDKQSLFYYSKFLIQGVKDLCFEYPYDIKLILEETSGNK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA