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The map label for this gene is tpn50 [H]

Identifier: 187918041

GI number: 187918041

Start: 168283

End: 169440

Strand: Direct

Name: tpn50 [H]

Synonym: BH0167

Alternate gene names: 187918041

Gene position: 168283-169440 (Clockwise)

Preceding gene: 187918035

Following gene: 187918043

Centisome position: 18.25

GC content: 27.46

Gene sequence:

>1158_bases
ATGAATGTTAAAGCTGTCATATTATTATTTTTAACAAACACTCTAGCATTTTCAGCTGAAATATTAGAATTTAAATACAC
TAAAGGATCTAAATTCAGAATAGAAACTACAGATAATCAAGAAATCTATCTCAATGGAATACTTAATTCAAAAACCAAGA
CTAATATCCAAGTCTCAAGCGAAGTAAAAGATGTCAAATATGACTTTGCAGATATTAAATCTTACTTTAGAGTGTTAAAA
AGAGATAATGAGAGCGACGTTTACTTACTTAAAGAAGAATTTGAAGGGAATTTCAGTATAAATAAACAAGGCGAATATAA
GATTAATAATGATCAAAAAAGACCTTCTGTTAGAGGCATTCCAAGATTCCCAAAAACACCCATAAAAGTAAACGAAACTT
GGACATATCCAGCCGAAGAATATATCCAAGCATCTGAGATTTCAAAAGAAATAAAAGATTTTGTTACAAAATTTGATGTA
AATTATGTGTATAAAGGCAAAGAAAAAATAGACGATAAATATTACGACATAATTCACTCAAATTATGAGTCTAAATATAG
TGTAAAAAACATATTATTCTCTCAAAAGGTCAATCAAATAATCTATTTTGATTCAAAATCAGGAAACACATATAAATATA
ACGATACATATGTATTTCAAATGAAAAACGGCAACAATAATATCAAAATGATTGGAAACTCATCTGGAAAAATAATCTCT
ATTGAGCTGCCAAATGACAACACAATAGAGAATGAAGTGAAAGAATATATTAGCACAAAACAAATAGACTCTATTAAAAT
AGAGAAAAATGAAAATGGCATCAAATTAAGCTTAGATATTGAATTCTACCCTGATTCTTTTCAAATCATTCAAAAAGAAT
ATAGCAAGCTAAAACACATAGCCAATTTATTAGAAAAGTTTAAAAATAACAATATTCTAATAGAAGGACATACAGCAAAG
TTTGAAACAGAACAAGCAATGCAAGAACTATCTGAAAAAAGAGCTCATTCAATTGGAAACTACTTATTAAAAATGAAAGT
AAAGAACAAAAACCAAATATTTTTTAAAGGATGGGGTGCTAAAAAACCTAAGTATGCAAGCTCATCTCCTCTAGCATCAA
AAAATCGAAGAGTAGAAATTACAATTCTAAACAATTAA

Upstream 100 bases:

>100_bases
ATCATTATAACTAAAATGTAAAACTCACAAAGCATTATTAAAAAGATTTAACGAAATATTTCATAAAAAATATTATCTCA
ATTATGATATAATTCGTTAA

Downstream 100 bases:

>100_bases
ATATTAAACTGATCGTCTGCTCTTCTTTTCCTTTTTGGTTTGACAACTTATACACAAAAACGCATAAGGAATAGCTTCAA
GTCTCTCTCTTGCAATATTC

Product: outer membrane protein

Products: NA

Alternate protein names: Antigen tpp57 [H]

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MNVKAVILLFLTNTLAFSAEILEFKYTKGSKFRIETTDNQEIYLNGILNSKTKTNIQVSSEVKDVKYDFADIKSYFRVLK
RDNESDVYLLKEEFEGNFSINKQGEYKINNDQKRPSVRGIPRFPKTPIKVNETWTYPAEEYIQASEISKEIKDFVTKFDV
NYVYKGKEKIDDKYYDIIHSNYESKYSVKNILFSQKVNQIIYFDSKSGNTYKYNDTYVFQMKNGNNNIKMIGNSSGKIIS
IELPNDNTIENEVKEYISTKQIDSIKIEKNENGIKLSLDIEFYPDSFQIIQKEYSKLKHIANLLEKFKNNNILIEGHTAK
FETEQAMQELSEKRAHSIGNYLLKMKVKNKNQIFFKGWGAKKPKYASSSPLASKNRRVEITILNN

Sequences:

>Translated_385_residues
MNVKAVILLFLTNTLAFSAEILEFKYTKGSKFRIETTDNQEIYLNGILNSKTKTNIQVSSEVKDVKYDFADIKSYFRVLK
RDNESDVYLLKEEFEGNFSINKQGEYKINNDQKRPSVRGIPRFPKTPIKVNETWTYPAEEYIQASEISKEIKDFVTKFDV
NYVYKGKEKIDDKYYDIIHSNYESKYSVKNILFSQKVNQIIYFDSKSGNTYKYNDTYVFQMKNGNNNIKMIGNSSGKIIS
IELPNDNTIENEVKEYISTKQIDSIKIEKNENGIKLSLDIEFYPDSFQIIQKEYSKLKHIANLLEKFKNNNILIEGHTAK
FETEQAMQELSEKRAHSIGNYLLKMKVKNKNQIFFKGWGAKKPKYASSSPLASKNRRVEITILNN
>Mature_385_residues
MNVKAVILLFLTNTLAFSAEILEFKYTKGSKFRIETTDNQEIYLNGILNSKTKTNIQVSSEVKDVKYDFADIKSYFRVLK
RDNESDVYLLKEEFEGNFSINKQGEYKINNDQKRPSVRGIPRFPKTPIKVNETWTYPAEEYIQASEISKEIKDFVTKFDV
NYVYKGKEKIDDKYYDIIHSNYESKYSVKNILFSQKVNQIIYFDSKSGNTYKYNDTYVFQMKNGNNNIKMIGNSSGKIIS
IELPNDNTIENEVKEYISTKQIDSIKIEKNENGIKLSLDIEFYPDSFQIIQKEYSKLKHIANLLEKFKNNNILIEGHTAK
FETEQAMQELSEKRAHSIGNYLLKMKVKNKNQIFFKGWGAKKPKYASSSPLASKNRRVEITILNN

Specific function: Could function as a porin [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 44896; Mature: 44896

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKAVILLFLTNTLAFSAEILEFKYTKGSKFRIETTDNQEIYLNGILNSKTKTNIQVSS
CCCCEEEEEEEHHHHHHEEEEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCEEEECC
EVKDVKYDFADIKSYFRVLKRDNESDVYLLKEEFEGNFSINKQGEYKINNDQKRPSVRGI
CHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCEEECCCCCCCCCCCC
PRFPKTPIKVNETWTYPAEEYIQASEISKEIKDFVTKFDVNYVYKGKEKIDDKYYDIIHS
CCCCCCCEEECCEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHCHHHHHHHHC
NYESKYSVKNILFSQKVNQIIYFDSKSGNTYKYNDTYVFQMKNGNNNIKMIGNSSGKIIS
CCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEECCEEEEEEECCCCEEEEEECCCCCEEE
IELPNDNTIENEVKEYISTKQIDSIKIEKNENGIKLSLDIEFYPDSFQIIQKEYSKLKHI
EECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHH
ANLLEKFKNNNILIEGHTAKFETEQAMQELSEKRAHSIGNYLLKMKVKNKNQIFFKGWGA
HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCC
KKPKYASSSPLASKNRRVEITILNN
CCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MNVKAVILLFLTNTLAFSAEILEFKYTKGSKFRIETTDNQEIYLNGILNSKTKTNIQVSS
CCCCEEEEEEEHHHHHHEEEEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCEEEECC
EVKDVKYDFADIKSYFRVLKRDNESDVYLLKEEFEGNFSINKQGEYKINNDQKRPSVRGI
CHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCEEECCCCCCCCCCCC
PRFPKTPIKVNETWTYPAEEYIQASEISKEIKDFVTKFDVNYVYKGKEKIDDKYYDIIHS
CCCCCCCEEECCEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHCHHHHHHHHC
NYESKYSVKNILFSQKVNQIIYFDSKSGNTYKYNDTYVFQMKNGNNNIKMIGNSSGKIIS
CCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEECCEEEEEEECCCCEEEEEECCCCCEEE
IELPNDNTIENEVKEYISTKQIDSIKIEKNENGIKLSLDIEFYPDSFQIIQKEYSKLKHI
EECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHH
ANLLEKFKNNNILIEGHTAKFETEQAMQELSEKRAHSIGNYLLKMKVKNKNQIFFKGWGA
HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCC
KKPKYASSSPLASKNRRVEITILNN
CCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8112835; 7623668; 9665876 [H]