Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is nagA [H]

Identifier: 187918027

GI number: 187918027

Start: 151334

End: 152539

Strand: Direct

Name: nagA [H]

Synonym: BH0151

Alternate gene names: 187918027

Gene position: 151334-152539 (Clockwise)

Preceding gene: 187918021

Following gene: 187918028

Centisome position: 16.41

GC content: 33.75

Gene sequence:

>1206_bases
ATGCCAAATTTTTGCTTGTTTAATGCAAAATCTGTACTGACAGGAAATGATAAAATAGATAATTCAGCTGTCCTTATTAA
GGATAGTAAAATTTTTGATATCGTAACAGCCGATAGGCTTGAAAAAATTGACTTACAAAACTATGAAATGATTGATGTTA
AGGGCAACTATATAACACCTGGTCTTTATGATAATCACATACATGGATTTCACGGCTATGGAACTGATCAATGCTCAACA
AACTCAATAATTAAAATGTCACAACATTTAGCAGAGTACGGAGTAGTAGGTTTTCTACCAACACTTTACCCACGTCCAAC
CGAAGAAATGATCGCAACAATCAAAGCATGCACCGAAGCAATAGGCAAAGAAAAGGGCGCAAAAATTTTAGGACTTCATC
TTGAAGGCCCATTTTTCTCTCCTGAAAAAAAAGGTGCACATCCTATCTCTTATCTTCAAAAACCAAGCATTGAAATCATG
AAAAAATTCATAGATGCAGCAGGGGGTACTTTTACAGATTCTTTTGGAAGAAAAAGAACAAACATTGCAACAATGACAGT
TGCACCTGAGCTTAAAGGTATGAGAGAGCTTGCAATGTTTTGCATGGAAAATAATATCACACTTCAAGCAGGTCATACCA
ATGCAAAATATGAAAATATGATTGAAGGTTTCCAAGTAGGCATACTTCACACAACTCATTTTTTCAATGCAATGTCAAAA
CTTGATCACAGAAATCCAAATGCAATAGGAGCGGTTTTAATTCATGGGGATGTATCTTGTGAACTTATTGCTGATGGGCA
TCATATTCATCCAAAACTTGTCTTAATGCTTAGAAAACTTAAAGACATAAGCAAATTAGTGCTTGTAACTGATGGATTAA
CCCCAACACTACAACCCTCTGGAAAATTAATAGCTAACGGAGAAGAGGTATATCTTAAAAATGACGGATTATTTCACATT
GTAGAAAACGATACAATAGCAGGCTCAGCTAGCACAATGATACAAGGCATTAAAAATCTAGTAGAATTTGGATATAGTTT
AAGCGATGCCATTCAAGCAAGTTCGTACAATCCAGTAAGAATAATTAATCTTGAAAAAAAAGGATCCATATGTCATGGTT
ATGATGCAAATATAAATGTCCTTGATAAGGATTTAAATTTAAAATTAACAATGATAGAATCAAAAATAATTTTTAACAGA
CTTTGA

Upstream 100 bases:

>100_bases
AAAATTAACAACAAAAATCCCATTAAAATACATAAAAAACAAGCTTTTTTAAAAAAAGATATTTACTTATAGTAAAATTT
AAATTTATAGGAGAGTAAAT

Downstream 100 bases:

>100_bases
TTTTATTTATAAATATAAGGAGAGAATAAATGAGATTAATCATTAGAACTAACTATAATGACATTTCAAAATGGGCTGCT
AATCATGTTGCCATGAGAAT

Product: N-acetylglucosamine-6-phosphate deacetylase

Products: NA

Alternate protein names: GlcNAc 6-P deacetylase [H]

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MPNFCLFNAKSVLTGNDKIDNSAVLIKDSKIFDIVTADRLEKIDLQNYEMIDVKGNYITPGLYDNHIHGFHGYGTDQCST
NSIIKMSQHLAEYGVVGFLPTLYPRPTEEMIATIKACTEAIGKEKGAKILGLHLEGPFFSPEKKGAHPISYLQKPSIEIM
KKFIDAAGGTFTDSFGRKRTNIATMTVAPELKGMRELAMFCMENNITLQAGHTNAKYENMIEGFQVGILHTTHFFNAMSK
LDHRNPNAIGAVLIHGDVSCELIADGHHIHPKLVLMLRKLKDISKLVLVTDGLTPTLQPSGKLIANGEEVYLKNDGLFHI
VENDTIAGSASTMIQGIKNLVEFGYSLSDAIQASSYNPVRIINLEKKGSICHGYDANINVLDKDLNLKLTMIESKIIFNR
L

Sequences:

>Translated_401_residues
MPNFCLFNAKSVLTGNDKIDNSAVLIKDSKIFDIVTADRLEKIDLQNYEMIDVKGNYITPGLYDNHIHGFHGYGTDQCST
NSIIKMSQHLAEYGVVGFLPTLYPRPTEEMIATIKACTEAIGKEKGAKILGLHLEGPFFSPEKKGAHPISYLQKPSIEIM
KKFIDAAGGTFTDSFGRKRTNIATMTVAPELKGMRELAMFCMENNITLQAGHTNAKYENMIEGFQVGILHTTHFFNAMSK
LDHRNPNAIGAVLIHGDVSCELIADGHHIHPKLVLMLRKLKDISKLVLVTDGLTPTLQPSGKLIANGEEVYLKNDGLFHI
VENDTIAGSASTMIQGIKNLVEFGYSLSDAIQASSYNPVRIINLEKKGSICHGYDANINVLDKDLNLKLTMIESKIIFNR
L
>Mature_400_residues
PNFCLFNAKSVLTGNDKIDNSAVLIKDSKIFDIVTADRLEKIDLQNYEMIDVKGNYITPGLYDNHIHGFHGYGTDQCSTN
SIIKMSQHLAEYGVVGFLPTLYPRPTEEMIATIKACTEAIGKEKGAKILGLHLEGPFFSPEKKGAHPISYLQKPSIEIMK
KFIDAAGGTFTDSFGRKRTNIATMTVAPELKGMRELAMFCMENNITLQAGHTNAKYENMIEGFQVGILHTTHFFNAMSKL
DHRNPNAIGAVLIHGDVSCELIADGHHIHPKLVLMLRKLKDISKLVLVTDGLTPTLQPSGKLIANGEEVYLKNDGLFHIV
ENDTIAGSASTMIQGIKNLVEFGYSLSDAIQASSYNPVRIINLEKKGSICHGYDANINVLDKDLNLKLTMIESKIIFNRL

Specific function: N-acetylglucosamine utilization. [C]

COG id: COG1820

COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nagA family [H]

Homologues:

Organism=Homo sapiens, GI21361513, Length=394, Percent_Identity=27.1573604060914, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI224922791, Length=392, Percent_Identity=27.2959183673469, Blast_Score=128, Evalue=1e-29,
Organism=Escherichia coli, GI1786892, Length=387, Percent_Identity=29.9741602067183, Blast_Score=162, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17553768, Length=398, Percent_Identity=28.1407035175879, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI19920392, Length=354, Percent_Identity=30.225988700565, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI281361140, Length=359, Percent_Identity=29.5264623955432, Blast_Score=121, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR003764
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: =3.5.1.25 [H]

Molecular weight: Translated: 44325; Mature: 44194

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNFCLFNAKSVLTGNDKIDNSAVLIKDSKIFDIVTADRLEKIDLQNYEMIDVKGNYITP
CCCEEEEECCEEEECCCCCCCCEEEEECCCEEEEEEHHHHHHCCCCCEEEEEECCCEECC
GLYDNHIHGFHGYGTDQCSTNSIIKMSQHLAEYGVVGFLPTLYPRPTEEMIATIKACTEA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHH
IGKEKGAKILGLHLEGPFFSPEKKGAHPISYLQKPSIEIMKKFIDAAGGTFTDSFGRKRT
HCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCHHCCCCCC
NIATMTVAPELKGMRELAMFCMENNITLQAGHTNAKYENMIEGFQVGILHTTHFFNAMSK
CEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHEEEEEEEHHHHHHHHHH
LDHRNPNAIGAVLIHGDVSCELIADGHHIHPKLVLMLRKLKDISKLVLVTDGLTPTLQPS
HCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCC
GKLIANGEEVYLKNDGLFHIVENDTIAGSASTMIQGIKNLVEFGYSLSDAIQASSYNPVR
CCEEECCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEE
IINLEKKGSICHGYDANINVLDKDLNLKLTMIESKIIFNRL
EEEEECCCCEEECCCCCCEEEECCCCEEEEEEEEEHHHCCC
>Mature Secondary Structure 
PNFCLFNAKSVLTGNDKIDNSAVLIKDSKIFDIVTADRLEKIDLQNYEMIDVKGNYITP
CCEEEEECCEEEECCCCCCCCEEEEECCCEEEEEEHHHHHHCCCCCEEEEEECCCEECC
GLYDNHIHGFHGYGTDQCSTNSIIKMSQHLAEYGVVGFLPTLYPRPTEEMIATIKACTEA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHH
IGKEKGAKILGLHLEGPFFSPEKKGAHPISYLQKPSIEIMKKFIDAAGGTFTDSFGRKRT
HCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCHHCCCCCC
NIATMTVAPELKGMRELAMFCMENNITLQAGHTNAKYENMIEGFQVGILHTTHFFNAMSK
CEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHEEEEEEEHHHHHHHHHH
LDHRNPNAIGAVLIHGDVSCELIADGHHIHPKLVLMLRKLKDISKLVLVTDGLTPTLQPS
HCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCC
GKLIANGEEVYLKNDGLFHIVENDTIAGSASTMIQGIKNLVEFGYSLSDAIQASSYNPVR
CCEEECCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEE
IINLEKKGSICHGYDANINVLDKDLNLKLTMIESKIIFNRL
EEEEECCCCEEECCCCCCEEEECCCCEEEEEEEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA