| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is nagA [H]
Identifier: 187918027
GI number: 187918027
Start: 151334
End: 152539
Strand: Direct
Name: nagA [H]
Synonym: BH0151
Alternate gene names: 187918027
Gene position: 151334-152539 (Clockwise)
Preceding gene: 187918021
Following gene: 187918028
Centisome position: 16.41
GC content: 33.75
Gene sequence:
>1206_bases ATGCCAAATTTTTGCTTGTTTAATGCAAAATCTGTACTGACAGGAAATGATAAAATAGATAATTCAGCTGTCCTTATTAA GGATAGTAAAATTTTTGATATCGTAACAGCCGATAGGCTTGAAAAAATTGACTTACAAAACTATGAAATGATTGATGTTA AGGGCAACTATATAACACCTGGTCTTTATGATAATCACATACATGGATTTCACGGCTATGGAACTGATCAATGCTCAACA AACTCAATAATTAAAATGTCACAACATTTAGCAGAGTACGGAGTAGTAGGTTTTCTACCAACACTTTACCCACGTCCAAC CGAAGAAATGATCGCAACAATCAAAGCATGCACCGAAGCAATAGGCAAAGAAAAGGGCGCAAAAATTTTAGGACTTCATC TTGAAGGCCCATTTTTCTCTCCTGAAAAAAAAGGTGCACATCCTATCTCTTATCTTCAAAAACCAAGCATTGAAATCATG AAAAAATTCATAGATGCAGCAGGGGGTACTTTTACAGATTCTTTTGGAAGAAAAAGAACAAACATTGCAACAATGACAGT TGCACCTGAGCTTAAAGGTATGAGAGAGCTTGCAATGTTTTGCATGGAAAATAATATCACACTTCAAGCAGGTCATACCA ATGCAAAATATGAAAATATGATTGAAGGTTTCCAAGTAGGCATACTTCACACAACTCATTTTTTCAATGCAATGTCAAAA CTTGATCACAGAAATCCAAATGCAATAGGAGCGGTTTTAATTCATGGGGATGTATCTTGTGAACTTATTGCTGATGGGCA TCATATTCATCCAAAACTTGTCTTAATGCTTAGAAAACTTAAAGACATAAGCAAATTAGTGCTTGTAACTGATGGATTAA CCCCAACACTACAACCCTCTGGAAAATTAATAGCTAACGGAGAAGAGGTATATCTTAAAAATGACGGATTATTTCACATT GTAGAAAACGATACAATAGCAGGCTCAGCTAGCACAATGATACAAGGCATTAAAAATCTAGTAGAATTTGGATATAGTTT AAGCGATGCCATTCAAGCAAGTTCGTACAATCCAGTAAGAATAATTAATCTTGAAAAAAAAGGATCCATATGTCATGGTT ATGATGCAAATATAAATGTCCTTGATAAGGATTTAAATTTAAAATTAACAATGATAGAATCAAAAATAATTTTTAACAGA CTTTGA
Upstream 100 bases:
>100_bases AAAATTAACAACAAAAATCCCATTAAAATACATAAAAAACAAGCTTTTTTAAAAAAAGATATTTACTTATAGTAAAATTT AAATTTATAGGAGAGTAAAT
Downstream 100 bases:
>100_bases TTTTATTTATAAATATAAGGAGAGAATAAATGAGATTAATCATTAGAACTAACTATAATGACATTTCAAAATGGGCTGCT AATCATGTTGCCATGAGAAT
Product: N-acetylglucosamine-6-phosphate deacetylase
Products: NA
Alternate protein names: GlcNAc 6-P deacetylase [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MPNFCLFNAKSVLTGNDKIDNSAVLIKDSKIFDIVTADRLEKIDLQNYEMIDVKGNYITPGLYDNHIHGFHGYGTDQCST NSIIKMSQHLAEYGVVGFLPTLYPRPTEEMIATIKACTEAIGKEKGAKILGLHLEGPFFSPEKKGAHPISYLQKPSIEIM KKFIDAAGGTFTDSFGRKRTNIATMTVAPELKGMRELAMFCMENNITLQAGHTNAKYENMIEGFQVGILHTTHFFNAMSK LDHRNPNAIGAVLIHGDVSCELIADGHHIHPKLVLMLRKLKDISKLVLVTDGLTPTLQPSGKLIANGEEVYLKNDGLFHI VENDTIAGSASTMIQGIKNLVEFGYSLSDAIQASSYNPVRIINLEKKGSICHGYDANINVLDKDLNLKLTMIESKIIFNR L
Sequences:
>Translated_401_residues MPNFCLFNAKSVLTGNDKIDNSAVLIKDSKIFDIVTADRLEKIDLQNYEMIDVKGNYITPGLYDNHIHGFHGYGTDQCST NSIIKMSQHLAEYGVVGFLPTLYPRPTEEMIATIKACTEAIGKEKGAKILGLHLEGPFFSPEKKGAHPISYLQKPSIEIM KKFIDAAGGTFTDSFGRKRTNIATMTVAPELKGMRELAMFCMENNITLQAGHTNAKYENMIEGFQVGILHTTHFFNAMSK LDHRNPNAIGAVLIHGDVSCELIADGHHIHPKLVLMLRKLKDISKLVLVTDGLTPTLQPSGKLIANGEEVYLKNDGLFHI VENDTIAGSASTMIQGIKNLVEFGYSLSDAIQASSYNPVRIINLEKKGSICHGYDANINVLDKDLNLKLTMIESKIIFNR L >Mature_400_residues PNFCLFNAKSVLTGNDKIDNSAVLIKDSKIFDIVTADRLEKIDLQNYEMIDVKGNYITPGLYDNHIHGFHGYGTDQCSTN SIIKMSQHLAEYGVVGFLPTLYPRPTEEMIATIKACTEAIGKEKGAKILGLHLEGPFFSPEKKGAHPISYLQKPSIEIMK KFIDAAGGTFTDSFGRKRTNIATMTVAPELKGMRELAMFCMENNITLQAGHTNAKYENMIEGFQVGILHTTHFFNAMSKL DHRNPNAIGAVLIHGDVSCELIADGHHIHPKLVLMLRKLKDISKLVLVTDGLTPTLQPSGKLIANGEEVYLKNDGLFHIV ENDTIAGSASTMIQGIKNLVEFGYSLSDAIQASSYNPVRIINLEKKGSICHGYDANINVLDKDLNLKLTMIESKIIFNRL
Specific function: N-acetylglucosamine utilization. [C]
COG id: COG1820
COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nagA family [H]
Homologues:
Organism=Homo sapiens, GI21361513, Length=394, Percent_Identity=27.1573604060914, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI224922791, Length=392, Percent_Identity=27.2959183673469, Blast_Score=128, Evalue=1e-29, Organism=Escherichia coli, GI1786892, Length=387, Percent_Identity=29.9741602067183, Blast_Score=162, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17553768, Length=398, Percent_Identity=28.1407035175879, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI19920392, Length=354, Percent_Identity=30.225988700565, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI281361140, Length=359, Percent_Identity=29.5264623955432, Blast_Score=121, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR003764 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.1.25 [H]
Molecular weight: Translated: 44325; Mature: 44194
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNFCLFNAKSVLTGNDKIDNSAVLIKDSKIFDIVTADRLEKIDLQNYEMIDVKGNYITP CCCEEEEECCEEEECCCCCCCCEEEEECCCEEEEEEHHHHHHCCCCCEEEEEECCCEECC GLYDNHIHGFHGYGTDQCSTNSIIKMSQHLAEYGVVGFLPTLYPRPTEEMIATIKACTEA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHH IGKEKGAKILGLHLEGPFFSPEKKGAHPISYLQKPSIEIMKKFIDAAGGTFTDSFGRKRT HCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCHHCCCCCC NIATMTVAPELKGMRELAMFCMENNITLQAGHTNAKYENMIEGFQVGILHTTHFFNAMSK CEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHEEEEEEEHHHHHHHHHH LDHRNPNAIGAVLIHGDVSCELIADGHHIHPKLVLMLRKLKDISKLVLVTDGLTPTLQPS HCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCC GKLIANGEEVYLKNDGLFHIVENDTIAGSASTMIQGIKNLVEFGYSLSDAIQASSYNPVR CCEEECCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEE IINLEKKGSICHGYDANINVLDKDLNLKLTMIESKIIFNRL EEEEECCCCEEECCCCCCEEEECCCCEEEEEEEEEHHHCCC >Mature Secondary Structure PNFCLFNAKSVLTGNDKIDNSAVLIKDSKIFDIVTADRLEKIDLQNYEMIDVKGNYITP CCEEEEECCEEEECCCCCCCCEEEEECCCEEEEEEHHHHHHCCCCCEEEEEECCCEECC GLYDNHIHGFHGYGTDQCSTNSIIKMSQHLAEYGVVGFLPTLYPRPTEEMIATIKACTEA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHH IGKEKGAKILGLHLEGPFFSPEKKGAHPISYLQKPSIEIMKKFIDAAGGTFTDSFGRKRT HCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCHHCCCCCC NIATMTVAPELKGMRELAMFCMENNITLQAGHTNAKYENMIEGFQVGILHTTHFFNAMSK CEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHEEEEEEEHHHHHHHHHH LDHRNPNAIGAVLIHGDVSCELIADGHHIHPKLVLMLRKLKDISKLVLVTDGLTPTLQPS HCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCC GKLIANGEEVYLKNDGLFHIVENDTIAGSASTMIQGIKNLVEFGYSLSDAIQASSYNPVR CCEEECCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEE IINLEKKGSICHGYDANINVLDKDLNLKLTMIESKIIFNRL EEEEECCCCEEECCCCCCEEEECCCCEEEEEEEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA