| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187917956
Identifier: 187917956
GI number: 187917956
Start: 73124
End: 74176
Strand: Direct
Name: 187917956
Synonym: BH0077
Alternate gene names: NA
Gene position: 73124-74176 (Clockwise)
Preceding gene: 187917955
Following gene: 187917957
Centisome position: 7.93
GC content: 22.98
Gene sequence:
>1053_bases ATGACAAAAAAGATAGTAATATTATTTTTAGCATTTATAATACCAAATGCATATGGGCAAAGATACTTCATATCCGATGT ATTTTTCAATAAATATCAGGAAATATATGAAATTCCACAAACAGGATTTTACATTGAATACACAAAAATTAATGAAATTG AAAAATTTAGTCTCTTTAAAGACTTAAAACTGACAAAATACAAAACACAAGAAACAATAGAAGATAAAAAAAAACTAACA TTCTATAATGAACAAAACATTAAAACAAATGAAGAAATTTATGATAACTTAAATAATAAAATACAAGAAATAAAATATAG TCCCAAAGGAATAATTCTTGAATCTGTAGACTATTTTTATAAAAACAATGATTTAATTTATAAAGAAATCAAAATTTTAA ATCAAAAACCAAAAACACTACACTACATGAAAGACACTAATGGCAAGCTTTTAAAAATAACGGGTTCGGATTTCCAAGTT TGGAATTACGGAATCAGTGGAGAAATCAAATCAACATATTTTGACATAAAAAAATCCAAAATAAAAGTAATCCAATATGA CGATCAAAAAAGGCATTTAGAAAGCATAATATTAGACAATAACAAAATTAAATCTAAAGAAAAAAATCAATATCTAGATG AACACGAAGTAATCAATACTGCAGAAGAAGACAATATAAAAACTATATCAAAATATAAGGGCCCCAACCTAATCAGAAAA GAAATATATAAAAATAACGAAATAACAAAGATAAGTGATTTTGAATATAATGAATCTGGAAACGTTATAGTTGAAAATAT AACTGTAAAGGAAAATAAAAAAGAACATAACACTAAAACAACATACGAATATAATTCTGATAATAATTTAAAGTCAAAAA CAATTTATGAGAATGACTCAATATTATTAAAAACTAACTACTCTAATGACAATGAATACGAACAAGAAATATACTATAAT GGAAATCCTATCTTTAAAGTAAGATATAAAAATGATGAAATTATTGAAGAAATAAATAAAAATATTACTAGAGATGAAAA TGGGACTAAATAA
Upstream 100 bases:
>100_bases TCTCAAAGCTATTTAAGAAACCAATATACTTTTTCACATTTGGAGAACAAGTAGAACATATTAAAGAATTTAACACTGAT GACTACTTGAATAGGTTATT
Downstream 100 bases:
>100_bases ATTTTTACTGAAAAGATTAATTTTAGATGAACAAAATAGTTCATCACTTACAATTGTAATAATCTTAAGCATAGTGCTTG GGCAAATCATTATCATCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTKKIVILFLAFIIPNAYGQRYFISDVFFNKYQEIYEIPQTGFYIEYTKINEIEKFSLFKDLKLTKYKTQETIEDKKKLT FYNEQNIKTNEEIYDNLNNKIQEIKYSPKGIILESVDYFYKNNDLIYKEIKILNQKPKTLHYMKDTNGKLLKITGSDFQV WNYGISGEIKSTYFDIKKSKIKVIQYDDQKRHLESIILDNNKIKSKEKNQYLDEHEVINTAEEDNIKTISKYKGPNLIRK EIYKNNEITKISDFEYNESGNVIVENITVKENKKEHNTKTTYEYNSDNNLKSKTIYENDSILLKTNYSNDNEYEQEIYYN GNPIFKVRYKNDEIIEEINKNITRDENGTK
Sequences:
>Translated_350_residues MTKKIVILFLAFIIPNAYGQRYFISDVFFNKYQEIYEIPQTGFYIEYTKINEIEKFSLFKDLKLTKYKTQETIEDKKKLT FYNEQNIKTNEEIYDNLNNKIQEIKYSPKGIILESVDYFYKNNDLIYKEIKILNQKPKTLHYMKDTNGKLLKITGSDFQV WNYGISGEIKSTYFDIKKSKIKVIQYDDQKRHLESIILDNNKIKSKEKNQYLDEHEVINTAEEDNIKTISKYKGPNLIRK EIYKNNEITKISDFEYNESGNVIVENITVKENKKEHNTKTTYEYNSDNNLKSKTIYENDSILLKTNYSNDNEYEQEIYYN GNPIFKVRYKNDEIIEEINKNITRDENGTK >Mature_349_residues TKKIVILFLAFIIPNAYGQRYFISDVFFNKYQEIYEIPQTGFYIEYTKINEIEKFSLFKDLKLTKYKTQETIEDKKKLTF YNEQNIKTNEEIYDNLNNKIQEIKYSPKGIILESVDYFYKNNDLIYKEIKILNQKPKTLHYMKDTNGKLLKITGSDFQVW NYGISGEIKSTYFDIKKSKIKVIQYDDQKRHLESIILDNNKIKSKEKNQYLDEHEVINTAEEDNIKTISKYKGPNLIRKE IYKNNEITKISDFEYNESGNVIVENITVKENKKEHNTKTTYEYNSDNNLKSKTIYENDSILLKTNYSNDNEYEQEIYYNG NPIFKVRYKNDEIIEEINKNITRDENGTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41867; Mature: 41736
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKIVILFLAFIIPNAYGQRYFISDVFFNKYQEIYEIPQTGFYIEYTKINEIEKFSLFK CCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHH DLKLTKYKTQETIEDKKKLTFYNEQNIKTNEEIYDNLNNKIQEIKYSPKGIILESVDYFY HCHHHEEHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCEEEECCHHEE KNNDLIYKEIKILNQKPKTLHYMKDTNGKLLKITGSDFQVWNYGISGEIKSTYFDIKKSK CCCCEEEEEHHHHCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCEEHHEEEEECCE IKVIQYDDQKRHLESIILDNNKIKSKEKNQYLDEHEVINTAEEDNIKTISKYKGPNLIRK EEEEEECCHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHCCCCCCCCHHHHHCCCCHHHHH EIYKNNEITKISDFEYNESGNVIVENITVKENKKEHNTKTTYEYNSDNNLKSKTIYENDS HHHCCCCEEEEECCEECCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEECCCC ILLKTNYSNDNEYEQEIYYNGNPIFKVRYKNDEIIEEINKNITRDENGTK EEEEECCCCCCCCCEEEEECCCEEEEEEECCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TKKIVILFLAFIIPNAYGQRYFISDVFFNKYQEIYEIPQTGFYIEYTKINEIEKFSLFK CCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHH DLKLTKYKTQETIEDKKKLTFYNEQNIKTNEEIYDNLNNKIQEIKYSPKGIILESVDYFY HCHHHEEHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCEEEECCHHEE KNNDLIYKEIKILNQKPKTLHYMKDTNGKLLKITGSDFQVWNYGISGEIKSTYFDIKKSK CCCCEEEEEHHHHCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCEEHHEEEEECCE IKVIQYDDQKRHLESIILDNNKIKSKEKNQYLDEHEVINTAEEDNIKTISKYKGPNLIRK EEEEEECCHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHCCCCCCCCHHHHHCCCCHHHHH EIYKNNEITKISDFEYNESGNVIVENITVKENKKEHNTKTTYEYNSDNNLKSKTIYENDS HHHCCCCEEEEECCEECCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEECCCC ILLKTNYSNDNEYEQEIYYNGNPIFKVRYKNDEIIEEINKNITRDENGTK EEEEECCCCCCCCCEEEEECCCEEEEEEECCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA