| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187917914
Identifier: 187917914
GI number: 187917914
Start: 29357
End: 30826
Strand: Direct
Name: 187917914
Synonym: BH0032
Alternate gene names: NA
Gene position: 29357-30826 (Clockwise)
Preceding gene: 187917910
Following gene: 187917915
Centisome position: 3.18
GC content: 27.01
Gene sequence:
>1470_bases ATGCTCAAAGAGAATGATGGTCTTGATATTAATGAGGAATCGCTTACAGTAAAATTAAAACCAATATTAGGAATAACTCC AAAGATTTACGTTTTATTTACAATAATTATCCTACCCTTAATACTAGTATTTAGTTTAATCCTAAACGCCAAATTAAACA ATCCTGGGGCATACTTAAAGGTAAAAACTAATATCAATAACGCACATGTCTATATAGACGAAAAATACATTGGAAGAACC CCATTTCAAAAATATGTAAATGCCACCAAAGGAACTTTAAAGATTCAAAGGTTCGGTTTTGAGACTTATGAAAAAAAAAT TGACATACAAAATAGACTTTTCACAAGTTATAAATTCAATATTGATCTAAAACTAAGAGATCCTAGCAAGATCATTACAC AAAGACAAAAAGAACTCTCGGTTATGACAAAAATTAAAAATACTAGCGACAATATAAAACTAATTCCAGTATTTTCATTA ATTGTAAACGACCTACAAAATAACCCAGAATATATAAAAAAATTCTTTAAAACTTCCATTCCATATATACATTCAAATAC AATGTTCAAAGATTTTTTCATAGCATACAAAAATATCTACTCAACAAACAATAACAGCAACAAAGAAATATGGGAATCTT TACAACAAAACTTTAATCTAGACAATAGATCAATAATTTGGTTTTTTGAAAATCTAGACAAAGAACAACAAAAACAAATA TCCAACGAAACATGGTTTAAGACACTAATAGAAAAATTAAAAAATGAAAATAAAATATTAAACTTTGAAAGTCAAACCAT AGATTTGTATCTAAAGAATTTTAAAAAGATAACATCTCAAAATATTGAAAGTATTCAAAATTACAAATTATATTCACAAG ATCTTACACTCAAGACTACATATAAGTTAAAAGAATTTTTAATCCAAAATAAAAATGTGACTAAAGCTGAATATCAAGAC TTTTTAAATGAAAATCCAAAGTGGGCACTAAACAATAAAGATAATTTGATCAAAGAAGAACTCGTAGATGAAGGTTACCT TAAAACTTTTAAACAAATGTCTTCAAATGAAGATATTACACACATATCTTATCATGCAGCAATAGAATATGCTAAATGGT ATTCTTCAAATTTACCTAAAGGATTTAAAGCAAGACTTCCTATATCTCAAGAATGGGAATTATATCAAAGAGAAGTACCA AAGGCCATAGAAAATCTAAATATCAATGAAATATCTAAAAAAGTTGGATTTTGGAATCTAATGCAAAACCCAAGCTTCAA TGAGTCCATATTATTTCAAGACGAAAACGATATATATTCTGCAAGCTCACACTTCAACTCACTAATCACTGAAATTAGAA CATATAACTATAATAACAGCTCAAAACTTAAACCTTCAACTAAAGCTTCGTTCTTAAAATATTGGAGCTCTCCAAATATT GGATTTAGACTAGTTATTGAAAAGGAATAG
Upstream 100 bases:
>100_bases ATTTTAAATCAAGCAAAACTTGTTTGTATTTTTTAATTAATACAAACAAAGGAATATGCAATATTGAATTTCTTTTAATA CTTTTTTATAATCACTATAT
Downstream 100 bases:
>100_bases ATGTGAACTCATTACTACTTGAAAACAAAAAAGCAAGATTCAATTACTTCATTGAAGATAAAATAAGTTGTGGAATTGTT TTAAAAGGAACTGAAGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MLKENDGLDINEESLTVKLKPILGITPKIYVLFTIIILPLILVFSLILNAKLNNPGAYLKVKTNINNAHVYIDEKYIGRT PFQKYVNATKGTLKIQRFGFETYEKKIDIQNRLFTSYKFNIDLKLRDPSKIITQRQKELSVMTKIKNTSDNIKLIPVFSL IVNDLQNNPEYIKKFFKTSIPYIHSNTMFKDFFIAYKNIYSTNNNSNKEIWESLQQNFNLDNRSIIWFFENLDKEQQKQI SNETWFKTLIEKLKNENKILNFESQTIDLYLKNFKKITSQNIESIQNYKLYSQDLTLKTTYKLKEFLIQNKNVTKAEYQD FLNENPKWALNNKDNLIKEELVDEGYLKTFKQMSSNEDITHISYHAAIEYAKWYSSNLPKGFKARLPISQEWELYQREVP KAIENLNINEISKKVGFWNLMQNPSFNESILFQDENDIYSASSHFNSLITEIRTYNYNNSSKLKPSTKASFLKYWSSPNI GFRLVIEKE
Sequences:
>Translated_489_residues MLKENDGLDINEESLTVKLKPILGITPKIYVLFTIIILPLILVFSLILNAKLNNPGAYLKVKTNINNAHVYIDEKYIGRT PFQKYVNATKGTLKIQRFGFETYEKKIDIQNRLFTSYKFNIDLKLRDPSKIITQRQKELSVMTKIKNTSDNIKLIPVFSL IVNDLQNNPEYIKKFFKTSIPYIHSNTMFKDFFIAYKNIYSTNNNSNKEIWESLQQNFNLDNRSIIWFFENLDKEQQKQI SNETWFKTLIEKLKNENKILNFESQTIDLYLKNFKKITSQNIESIQNYKLYSQDLTLKTTYKLKEFLIQNKNVTKAEYQD FLNENPKWALNNKDNLIKEELVDEGYLKTFKQMSSNEDITHISYHAAIEYAKWYSSNLPKGFKARLPISQEWELYQREVP KAIENLNINEISKKVGFWNLMQNPSFNESILFQDENDIYSASSHFNSLITEIRTYNYNNSSKLKPSTKASFLKYWSSPNI GFRLVIEKE >Mature_489_residues MLKENDGLDINEESLTVKLKPILGITPKIYVLFTIIILPLILVFSLILNAKLNNPGAYLKVKTNINNAHVYIDEKYIGRT PFQKYVNATKGTLKIQRFGFETYEKKIDIQNRLFTSYKFNIDLKLRDPSKIITQRQKELSVMTKIKNTSDNIKLIPVFSL IVNDLQNNPEYIKKFFKTSIPYIHSNTMFKDFFIAYKNIYSTNNNSNKEIWESLQQNFNLDNRSIIWFFENLDKEQQKQI SNETWFKTLIEKLKNENKILNFESQTIDLYLKNFKKITSQNIESIQNYKLYSQDLTLKTTYKLKEFLIQNKNVTKAEYQD FLNENPKWALNNKDNLIKEELVDEGYLKTFKQMSSNEDITHISYHAAIEYAKWYSSNLPKGFKARLPISQEWELYQREVP KAIENLNINEISKKVGFWNLMQNPSFNESILFQDENDIYSASSHFNSLITEIRTYNYNNSSKLKPSTKASFLKYWSSPNI GFRLVIEKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR013229 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF08308 PEGA [H]
EC number: NA
Molecular weight: Translated: 57741; Mature: 57741
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKENDGLDINEESLTVKLKPILGITPKIYVLFTIIILPLILVFSLILNAKLNNPGAYLK CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE VKTNINNAHVYIDEKYIGRTPFQKYVNATKGTLKIQRFGFETYEKKIDIQNRLFTSYKFN EEECCCCEEEEEECHHCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHCHHHHEEEEEEEE IDLKLRDPSKIITQRQKELSVMTKIKNTSDNIKLIPVFSLIVNDLQNNPEYIKKFFKTSI EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHCC PYIHSNTMFKDFFIAYKNIYSTNNNSNKEIWESLQQNFNLDNRSIIWFFENLDKEQQKQI CEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHCCHHHHHHH SNETWFKTLIEKLKNENKILNFESQTIDLYLKNFKKITSQNIESIQNYKLYSQDLTLKTT CCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCEEEEHH YKLKEFLIQNKNVTKAEYQDFLNENPKWALNNKDNLIKEELVDEGYLKTFKQMSSNEDIT HHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHCCHHHHHHHHHCCCCCCE HISYHAAIEYAKWYSSNLPKGFKARLPISQEWELYQREVPKAIENLNINEISKKVGFWNL EEEHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCHHHH MQNPSFNESILFQDENDIYSASSHFNSLITEIRTYNYNNSSKLKPSTKASFLKYWSSPNI CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCC GFRLVIEKE CEEEEEECC >Mature Secondary Structure MLKENDGLDINEESLTVKLKPILGITPKIYVLFTIIILPLILVFSLILNAKLNNPGAYLK CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE VKTNINNAHVYIDEKYIGRTPFQKYVNATKGTLKIQRFGFETYEKKIDIQNRLFTSYKFN EEECCCCEEEEEECHHCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHCHHHHEEEEEEEE IDLKLRDPSKIITQRQKELSVMTKIKNTSDNIKLIPVFSLIVNDLQNNPEYIKKFFKTSI EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHCC PYIHSNTMFKDFFIAYKNIYSTNNNSNKEIWESLQQNFNLDNRSIIWFFENLDKEQQKQI CEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHCCHHHHHHH SNETWFKTLIEKLKNENKILNFESQTIDLYLKNFKKITSQNIESIQNYKLYSQDLTLKTT CCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCEEEEHH YKLKEFLIQNKNVTKAEYQDFLNENPKWALNNKDNLIKEELVDEGYLKTFKQMSSNEDIT HHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHCCHHHHHHHHHCCCCCCE HISYHAAIEYAKWYSSNLPKGFKARLPISQEWELYQREVPKAIENLNINEISKKVGFWNL EEEHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCHHHH MQNPSFNESILFQDENDIYSASSHFNSLITEIRTYNYNNSSKLKPSTKASFLKYWSSPNI CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCC GFRLVIEKE CEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]