| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187917887
Identifier: 187917887
GI number: 187917887
Start: 3680
End: 5467
Strand: Direct
Name: 187917887
Synonym: BH0004
Alternate gene names: NA
Gene position: 3680-5467 (Clockwise)
Preceding gene: 187917884
Following gene: 187917891
Centisome position: 0.4
GC content: 29.19
Gene sequence:
>1788_bases ATGCTAAAAAATTATATATTAAACATGACAAATCTAAGAAATGCTATTAATAAAATGATACTTTCTCCTTCTGGCTTTAG AAAAATATTTGCAAAATCAAAAGATGAAAATTCAACAGATCATGAAATAAATGATGACGATAAAATATTGATTGCTCTTA TAACCCTTACAATATCAAATTATTTTAAAGATAAACCAAAAGAATACATCAATGTTGGATTAGACTCAAGATCAACTGGA AATATAATCTCAGAGATTGTAATTAAGACACTAATCTTAAACAATGACAATGTAAATTTTTTTGGAATACTTCCAATACC AGAAATATTAGCTTATACAAAAGAAAGTCAAAATTCAAAAGGTTTTATATACATTTCTGCCAGCCATAATCCTAAAGGAT ATAATGGTATCAAAACTGGATTAAATGATGGAGGTGTGCTCAACTCAAATGAAATAAAGAAAATAATATGCCAAATCAGA TCCAACATTGAAAATGAAAATTTAATGAATAATTTAATAACAAACTTACAAAATTTCAATAATAATGCTCTACACTTAAA AACATATGAAGTAATTATCACTTCACAAGATAAACATAAAACACGCTCTTATAACTCATATAAGTCACTAATGCAGCAAA TAATTTATCCAGACAAACATAATAAAGAAAATACTAACATACTAAAAGAAAATATCATAAAAGAACCCATAGGAATAATA GGTGAGATGAATGGTAGTTCTCGCATCAACTCAATTGATAAAGAAATGATTGAATCTTTAGGAATAAAATTGGAACTTCA TAACACTGAAATTGGAATCTTTAAGCACGGAATGACTCCCGAAGGGTCATCTCTAAATATGTGTAAACAAATATTAGAAC AAAAATTCAAGCAAGACAATTCTTTTCAATTAGGTTATGTCCCTGACTGTGATGGAGACAGGGGCAATTTGGTTGCAATT TTTAAAAAAGGACAAGCAACCATGATTGCACCACAAAAAATATTTGCACTCTCAGTACTCTCAGAGCTTAGTTATCTTTA CCATTCAGGCATTAAAGACAATTTGGCTGTCGTTGTTAATGATGCAACCTCACTAAACATCGAAAAAATAGCCATGCTAT TTAACACAAAAGTTTACAGAGTTGAAGTCGGTGAGGCCAACTTAACAGAAATGGCTGGCCTCTTACGGAATAAAGGATTA ATAGTAAAAATTTTTGGAGAAGGATCAAATGGAGGAAATATTACATACCCCTCAAAAGTAAGAGACCCACTAGCAACACT CTTTAGTATCATAAAACTGCTTAAAATCAAAAATATTTATAAAATATGGTGTGCACTATCTAATAATTCATATAACGAAC ACTACACTATTAATGATATATTAAAGACAATAAATTTTTATAGCAATGTAGAAGTATCATCAGAAAAAGCCATGCTTAAA ATAAATGTAGAAAATCAAGAAATACTTAAATCCAACTACGAAAAATTATTAAAAAAAGAGTTCAACAATAATACAGTCTT ACACAAATTACCAATCCATAATTATGAAATTATCAATTATGAAGGTATCAATCAAAACATCTCTAGAACAGGTGACTCCT CAGGAGGTCTTAAAGTTTTATTTAAAAATAACAAACAGGAAATAATTGCAAGTTTATGGATGCGGGGCTCAAAAACAGAA CCAATATTTAGAGTACTAAGTGAGGTCAAATCTGAACATAATGCCTTACTGTATCCTCTCTTAGATTTTCACAAACATTT AATACACACTGCCAACTCACTAGCATAA
Upstream 100 bases:
>100_bases ACAAGGATTATAATAAGTAATGCTTCTTATAATAGAATATGTTACTATAATTATGCTACTACAATAAAGGTAAATATTAA AACCTAATGAGGAGGAAAAT
Downstream 100 bases:
>100_bases TATAAATTATGACGAAACTCAAACACAACCTATATTACCATAATTAGTTATATAATAAATTATGTATTTAGATTACTTTT TAAAATATTCTCTGCATGCC
Product: phosphomannomutase
Products: alpha-D-glucose 6-phosphate
Alternate protein names: Phosphomannomutase; Phosphohexose Mutase Family Protein
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MLKNYILNMTNLRNAINKMILSPSGFRKIFAKSKDENSTDHEINDDDKILIALITLTISNYFKDKPKEYINVGLDSRSTG NIISEIVIKTLILNNDNVNFFGILPIPEILAYTKESQNSKGFIYISASHNPKGYNGIKTGLNDGGVLNSNEIKKIICQIR SNIENENLMNNLITNLQNFNNNALHLKTYEVIITSQDKHKTRSYNSYKSLMQQIIYPDKHNKENTNILKENIIKEPIGII GEMNGSSRINSIDKEMIESLGIKLELHNTEIGIFKHGMTPEGSSLNMCKQILEQKFKQDNSFQLGYVPDCDGDRGNLVAI FKKGQATMIAPQKIFALSVLSELSYLYHSGIKDNLAVVVNDATSLNIEKIAMLFNTKVYRVEVGEANLTEMAGLLRNKGL IVKIFGEGSNGGNITYPSKVRDPLATLFSIIKLLKIKNIYKIWCALSNNSYNEHYTINDILKTINFYSNVEVSSEKAMLK INVENQEILKSNYEKLLKKEFNNNTVLHKLPIHNYEIINYEGINQNISRTGDSSGGLKVLFKNNKQEIIASLWMRGSKTE PIFRVLSEVKSEHNALLYPLLDFHKHLIHTANSLA
Sequences:
>Translated_595_residues MLKNYILNMTNLRNAINKMILSPSGFRKIFAKSKDENSTDHEINDDDKILIALITLTISNYFKDKPKEYINVGLDSRSTG NIISEIVIKTLILNNDNVNFFGILPIPEILAYTKESQNSKGFIYISASHNPKGYNGIKTGLNDGGVLNSNEIKKIICQIR SNIENENLMNNLITNLQNFNNNALHLKTYEVIITSQDKHKTRSYNSYKSLMQQIIYPDKHNKENTNILKENIIKEPIGII GEMNGSSRINSIDKEMIESLGIKLELHNTEIGIFKHGMTPEGSSLNMCKQILEQKFKQDNSFQLGYVPDCDGDRGNLVAI FKKGQATMIAPQKIFALSVLSELSYLYHSGIKDNLAVVVNDATSLNIEKIAMLFNTKVYRVEVGEANLTEMAGLLRNKGL IVKIFGEGSNGGNITYPSKVRDPLATLFSIIKLLKIKNIYKIWCALSNNSYNEHYTINDILKTINFYSNVEVSSEKAMLK INVENQEILKSNYEKLLKKEFNNNTVLHKLPIHNYEIINYEGINQNISRTGDSSGGLKVLFKNNKQEIIASLWMRGSKTE PIFRVLSEVKSEHNALLYPLLDFHKHLIHTANSLA >Mature_595_residues MLKNYILNMTNLRNAINKMILSPSGFRKIFAKSKDENSTDHEINDDDKILIALITLTISNYFKDKPKEYINVGLDSRSTG NIISEIVIKTLILNNDNVNFFGILPIPEILAYTKESQNSKGFIYISASHNPKGYNGIKTGLNDGGVLNSNEIKKIICQIR SNIENENLMNNLITNLQNFNNNALHLKTYEVIITSQDKHKTRSYNSYKSLMQQIIYPDKHNKENTNILKENIIKEPIGII GEMNGSSRINSIDKEMIESLGIKLELHNTEIGIFKHGMTPEGSSLNMCKQILEQKFKQDNSFQLGYVPDCDGDRGNLVAI FKKGQATMIAPQKIFALSVLSELSYLYHSGIKDNLAVVVNDATSLNIEKIAMLFNTKVYRVEVGEANLTEMAGLLRNKGL IVKIFGEGSNGGNITYPSKVRDPLATLFSIIKLLKIKNIYKIWCALSNNSYNEHYTINDILKTINFYSNVEVSSEKAMLK INVENQEILKSNYEKLLKKEFNNNTVLHKLPIHNYEIINYEGINQNISRTGDSSGGLKVLFKNNKQEIIASLWMRGSKTE PIFRVLSEVKSEHNALLYPLLDFHKHLIHTANSLA
Specific function: Unknown
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.4.2.2
Molecular weight: Translated: 67320; Mature: 67320
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNYILNMTNLRNAINKMILSPSGFRKIFAKSKDENSTDHEINDDDKILIALITLTISN CCCHHEECHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHH YFKDKPKEYINVGLDSRSTGNIISEIVIKTLILNNDNVNFFGILPIPEILAYTKESQNSK HHHCCCHHHHEECCCCCCCHHHHHHHHHHHHEECCCCCCEEEECCHHHHHHHHCCCCCCC GFIYISASHNPKGYNGIKTGLNDGGVLNSNEIKKIICQIRSNIENENLMNNLITNLQNFN EEEEEEECCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC NNALHLKTYEVIITSQDKHKTRSYNSYKSLMQQIIYPDKHNKENTNILKENIIKEPIGII CCEEEEEEEEEEEECCCCHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHE GEMNGSSRINSIDKEMIESLGIKLELHNTEIGIFKHGMTPEGSSLNMCKQILEQKFKQDN ECCCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC SFQLGYVPDCDGDRGNLVAIFKKGQATMIAPQKIFALSVLSELSYLYHSGIKDNLAVVVN CEEEEECCCCCCCCCCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE DATSLNIEKIAMLFNTKVYRVEVGEANLTEMAGLLRNKGLIVKIFGEGSNGGNITYPSKV CCCCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCCCEECCHHH RDPLATLFSIIKLLKIKNIYKIWCALSNNSYNEHYTINDILKTINFYSNVEVSSEKAMLK HHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHCCCEECCCCEEEE INVENQEILKSNYEKLLKKEFNNNTVLHKLPIHNYEIINYEGINQNISRTGDSSGGLKVL EECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCHHCCCCCCCCEEEE FKNNKQEIIASLWMRGSKTEPIFRVLSEVKSEHNALLYPLLDFHKHLIHTANSLA EECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLKNYILNMTNLRNAINKMILSPSGFRKIFAKSKDENSTDHEINDDDKILIALITLTISN CCCHHEECHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHH YFKDKPKEYINVGLDSRSTGNIISEIVIKTLILNNDNVNFFGILPIPEILAYTKESQNSK HHHCCCHHHHEECCCCCCCHHHHHHHHHHHHEECCCCCCEEEECCHHHHHHHHCCCCCCC GFIYISASHNPKGYNGIKTGLNDGGVLNSNEIKKIICQIRSNIENENLMNNLITNLQNFN EEEEEEECCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC NNALHLKTYEVIITSQDKHKTRSYNSYKSLMQQIIYPDKHNKENTNILKENIIKEPIGII CCEEEEEEEEEEEECCCCHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHE GEMNGSSRINSIDKEMIESLGIKLELHNTEIGIFKHGMTPEGSSLNMCKQILEQKFKQDN ECCCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC SFQLGYVPDCDGDRGNLVAIFKKGQATMIAPQKIFALSVLSELSYLYHSGIKDNLAVVVN CEEEEECCCCCCCCCCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE DATSLNIEKIAMLFNTKVYRVEVGEANLTEMAGLLRNKGLIVKIFGEGSNGGNITYPSKV CCCCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCCCEECCHHH RDPLATLFSIIKLLKIKNIYKIWCALSNNSYNEHYTINDILKTINFYSNVEVSSEKAMLK HHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHCCCEECCCCEEEE INVENQEILKSNYEKLLKKEFNNNTVLHKLPIHNYEIINYEGINQNISRTGDSSGGLKVL EECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCHHCCCCCCCCEEEE FKNNKQEIIASLWMRGSKTEPIFRVLSEVKSEHNALLYPLLDFHKHLIHTANSLA EECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: alpha-D-glucose 1-phosphate
Specific reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA