| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is menE [H]
Identifier: 187736637
GI number: 187736637
Start: 2631809
End: 2632939
Strand: Direct
Name: menE [H]
Synonym: Amuc_2161
Alternate gene names: 187736637
Gene position: 2631809-2632939 (Clockwise)
Preceding gene: 187736636
Following gene: 187736639
Centisome position: 98.79
GC content: 64.99
Gene sequence:
>1131_bases ATGCCCGCCACCGGAACACCCCTGCCTTGGGACCGCGGCAACGGCCCCTGCGTGATGGCCCCGCCCCATTTGAGGGGCTG GGCGGAAGAGGCCGCCGCCTTTCTTTCCCTCCGGGGCATGGACGGAATCACAGCCTTCGCCACCTCCGGCTCTTCCGGTT CTCCGCCCAAAGCCATTTTGTTTACCCGCCGCGCCCTGGACATATGCGCGCGTGGGGCATTGGAACATTTACATGCGGAA AGCGGGGACTGGTGCTGCCCGCTGCCTGTATGGCATGTGGGGGGCGCCATGATTTACCTGCGCGCGGCCCTGGCCGGAAC CGCCGTCCATACGCTCCGCGGAAAGTGGTGCCCGCAGGCTTATGCCGACCTGATGAAAAGTTCCGGAGCCAGATGGTCCT CCCTGGTCCCCACGCAGGTAGTGGATCTGGTCAGCCTCGGCCTCCGCGCGCCTTCCACCGCCGGGTGCATTATCGTAGGC GGCGGCGCGCTGGACACGGAGACGGGACGGAAAGCACGCACCCTTGGCTGGCCCGTAGTGCAGAGCTACGGCATGACGGA AGCCGGCTCCCAATTAGCCACGGCCCTTCCCGGAGATTCCTTCCATACGGACCGCCTTTCCCTTCTGCCCCATTGGGAAG CTCAGACGGACAAAGGCGGCCTCCTGCGCTTCCAGGGGAAAGGCAAATTGTTCGGCCGCCTGTTGACGCAGGCTCATGGA GGGTTCCTTCTGGAAAGAGTCGCTCCGCAGGAGTGGTGGAGCACCCGCGACCTGGTGCGCCTGGAAGGGCGTTTGCTGAC CTTTCTGCGCCGGGCGGACAGACTTGTCAAAGTCCTGGGGGAACTGGTGGATCCGGATGCCGTTCAGGACGTTTTGCGCC GCAGCGTCCCGGAGGCTGTCGTGGAGGCAGTTCCACATCCGCGCGCCGGAATGGAACTGGTCGCCTGCGGCCCTTCCGCC GCCCCCCTGAAGCAGGCCTGCCGCGAGTGGAATGCGTCGGCCCCAGGCCCCCAGCGCATCCGCGCCGTCATGGAAACGCC CATCCCCCTCACGGTCATGGGAAAGCTGGACAGAAACCGGCTGCGCTCCCAGTTGAGCGATCATCCGGAAAAGTTGAAGG GAATTTACTAA
Upstream 100 bases:
>100_bases GGAAGCAGCCTATGCATGGATTGAGCATCATTTGAAGCCCCGCATGGAGGAACGCTGGCACACCCTGCGCAGAAAAGCCC TCCGGTAAACTGCCGCCGCC
Downstream 100 bases:
>100_bases AAGGTAATCTTCCGGGGATATTCATCAAAAGAATCCGGACCTGATGGAATGAAGAAATACGGCGGGGTTGGAATCCCCAA TCCCTTGCCCACTTCATTCA
Product: Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MPATGTPLPWDRGNGPCVMAPPHLRGWAEEAAAFLSLRGMDGITAFATSGSSGSPPKAILFTRRALDICARGALEHLHAE SGDWCCPLPVWHVGGAMIYLRAALAGTAVHTLRGKWCPQAYADLMKSSGARWSSLVPTQVVDLVSLGLRAPSTAGCIIVG GGALDTETGRKARTLGWPVVQSYGMTEAGSQLATALPGDSFHTDRLSLLPHWEAQTDKGGLLRFQGKGKLFGRLLTQAHG GFLLERVAPQEWWSTRDLVRLEGRLLTFLRRADRLVKVLGELVDPDAVQDVLRRSVPEAVVEAVPHPRAGMELVACGPSA APLKQACREWNASAPGPQRIRAVMETPIPLTVMGKLDRNRLRSQLSDHPEKLKGIY
Sequences:
>Translated_376_residues MPATGTPLPWDRGNGPCVMAPPHLRGWAEEAAAFLSLRGMDGITAFATSGSSGSPPKAILFTRRALDICARGALEHLHAE SGDWCCPLPVWHVGGAMIYLRAALAGTAVHTLRGKWCPQAYADLMKSSGARWSSLVPTQVVDLVSLGLRAPSTAGCIIVG GGALDTETGRKARTLGWPVVQSYGMTEAGSQLATALPGDSFHTDRLSLLPHWEAQTDKGGLLRFQGKGKLFGRLLTQAHG GFLLERVAPQEWWSTRDLVRLEGRLLTFLRRADRLVKVLGELVDPDAVQDVLRRSVPEAVVEAVPHPRAGMELVACGPSA APLKQACREWNASAPGPQRIRAVMETPIPLTVMGKLDRNRLRSQLSDHPEKLKGIY >Mature_375_residues PATGTPLPWDRGNGPCVMAPPHLRGWAEEAAAFLSLRGMDGITAFATSGSSGSPPKAILFTRRALDICARGALEHLHAES GDWCCPLPVWHVGGAMIYLRAALAGTAVHTLRGKWCPQAYADLMKSSGARWSSLVPTQVVDLVSLGLRAPSTAGCIIVGG GALDTETGRKARTLGWPVVQSYGMTEAGSQLATALPGDSFHTDRLSLLPHWEAQTDKGGLLRFQGKGKLFGRLLTQAHGG FLLERVAPQEWWSTRDLVRLEGRLLTFLRRADRLVKVLGELVDPDAVQDVLRRSVPEAVVEAVPHPRAGMELVACGPSAA PLKQACREWNASAPGPQRIRAVMETPIPLTVMGKLDRNRLRSQLSDHPEKLKGIY
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788595, Length=268, Percent_Identity=30.9701492537313, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 40540; Mature: 40409
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATGTPLPWDRGNGPCVMAPPHLRGWAEEAAAFLSLRGMDGITAFATSGSSGSPPKAIL CCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHH FTRRALDICARGALEHLHAESGDWCCPLPVWHVGGAMIYLRAALAGTAVHTLRGKWCPQA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH YADLMKSSGARWSSLVPTQVVDLVSLGLRAPSTAGCIIVGGGALDTETGRKARTLGWPVV HHHHHHCCCCCCHHCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCHHH QSYGMTEAGSQLATALPGDSFHTDRLSLLPHWEAQTDKGGLLRFQGKGKLFGRLLTQAHG HHCCCCHHCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCC GFLLERVAPQEWWSTRDLVRLEGRLLTFLRRADRLVKVLGELVDPDAVQDVLRRSVPEAV CHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VEAVPHPRAGMELVACGPSAAPLKQACREWNASAPGPQRIRAVMETPIPLTVMGKLDRNR HHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCHHHH LRSQLSDHPEKLKGIY HHHHHHCCHHHHCCCC >Mature Secondary Structure PATGTPLPWDRGNGPCVMAPPHLRGWAEEAAAFLSLRGMDGITAFATSGSSGSPPKAIL CCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHH FTRRALDICARGALEHLHAESGDWCCPLPVWHVGGAMIYLRAALAGTAVHTLRGKWCPQA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH YADLMKSSGARWSSLVPTQVVDLVSLGLRAPSTAGCIIVGGGALDTETGRKARTLGWPVV HHHHHHCCCCCCHHCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCHHH QSYGMTEAGSQLATALPGDSFHTDRLSLLPHWEAQTDKGGLLRFQGKGKLFGRLLTQAHG HHCCCCHHCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCC GFLLERVAPQEWWSTRDLVRLEGRLLTFLRRADRLVKVLGELVDPDAVQDVLRRSVPEAV CHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VEAVPHPRAGMELVACGPSAAPLKQACREWNASAPGPQRIRAVMETPIPLTVMGKLDRNR HHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCHHHH LRSQLSDHPEKLKGIY HHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]