| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736630
Identifier: 187736630
GI number: 187736630
Start: 2626516
End: 2627316
Strand: Direct
Name: 187736630
Synonym: Amuc_2153
Alternate gene names: NA
Gene position: 2626516-2627316 (Clockwise)
Preceding gene: 187736629
Following gene: 187736631
Centisome position: 98.59
GC content: 30.46
Gene sequence:
>801_bases ATGAAAAATATCTTCAATATATTAATATTCAGCACCATAATAAATATAACCCAAGCACAAGACAATATAGAAACTTTGAA ACAGATCGTTCAATCCGCAGATTTATTTCAAGATTTTCCTATAATAAAATTCATAGATACTAATAAAAATTTAAATGATA CCACAAGATACACACAGATACCATATTATCGGGATAGATTTGAAGCTTGGAAAAATATTCAAATAGTGACATCTGGAGTT ATCAAATTCAAAAAAGACAATGTAGTAGGTAGATCATATGATGTTATTCAGATAGATCAGCAAACTGGAAAGCCTGTTCC AAGTTTTTGTATGTTTGGTGGTCGAGATGCAGCAATTTATACATATCAAGTTTTGAAAATCGGACAAACCATGTATTTGT GCCACCAATGGTACAATGAATTATGGAAACCTGTTCATAATGAATGGGGAATATCTAGTGTAATAATCAAACACGATTCT TTCCAAGACAGAGCTATTATGTTCTTTTTGGATAAGGAAAAAAAATCATATGTCTTACCATGCGGAGTTGCCTCAGCCTT GTATGAGAAAAAAAATCAAAAGATTGTATTAACATTTTTTGATCGTAAAAATCAGCTTACCGAGCTGAATAATGAAGAAT ACCGTATTTCCAAAATAGAAGCTTCATGTGATAATGACAATATAACATGTTATCTGAATGATAAAAAAATTGATATGCAA TGGTCCAAAATAGGAAATTGGAGAGAAATGATGATTTATAATTTATGGACTTATGGCAACGGAATTGATTGGAAGAATTG A
Upstream 100 bases:
>100_bases ATTTTTAAAAAATGATTTAGGAAAAGGAATAGTTAAATTTTCTACTGACTATTGTATTTCTAAATGTAATAAAAGGCATA AAACATTAGATTAACAAAAC
Downstream 100 bases:
>100_bases CACTCCTGTATCAGAGCTATAATGCCCCCTTAGAATGCCCGACTGCCCGCACGCAGTGGGGGGTATGGAGCCTGCCCGCA GCGACAGCTTCAGCTACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKNIFNILIFSTIINITQAQDNIETLKQIVQSADLFQDFPIIKFIDTNKNLNDTTRYTQIPYYRDRFEAWKNIQIVTSGV IKFKKDNVVGRSYDVIQIDQQTGKPVPSFCMFGGRDAAIYTYQVLKIGQTMYLCHQWYNELWKPVHNEWGISSVIIKHDS FQDRAIMFFLDKEKKSYVLPCGVASALYEKKNQKIVLTFFDRKNQLTELNNEEYRISKIEASCDNDNITCYLNDKKIDMQ WSKIGNWREMMIYNLWTYGNGIDWKN
Sequences:
>Translated_266_residues MKNIFNILIFSTIINITQAQDNIETLKQIVQSADLFQDFPIIKFIDTNKNLNDTTRYTQIPYYRDRFEAWKNIQIVTSGV IKFKKDNVVGRSYDVIQIDQQTGKPVPSFCMFGGRDAAIYTYQVLKIGQTMYLCHQWYNELWKPVHNEWGISSVIIKHDS FQDRAIMFFLDKEKKSYVLPCGVASALYEKKNQKIVLTFFDRKNQLTELNNEEYRISKIEASCDNDNITCYLNDKKIDMQ WSKIGNWREMMIYNLWTYGNGIDWKN >Mature_266_residues MKNIFNILIFSTIINITQAQDNIETLKQIVQSADLFQDFPIIKFIDTNKNLNDTTRYTQIPYYRDRFEAWKNIQIVTSGV IKFKKDNVVGRSYDVIQIDQQTGKPVPSFCMFGGRDAAIYTYQVLKIGQTMYLCHQWYNELWKPVHNEWGISSVIIKHDS FQDRAIMFFLDKEKKSYVLPCGVASALYEKKNQKIVLTFFDRKNQLTELNNEEYRISKIEASCDNDNITCYLNDKKIDMQ WSKIGNWREMMIYNLWTYGNGIDWKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31468; Mature: 31468
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIFNILIFSTIINITQAQDNIETLKQIVQSADLFQDFPIIKFIDTNKNLNDTTRYTQI CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEC PYYRDRFEAWKNIQIVTSGVIKFKKDNVVGRSYDVIQIDQQTGKPVPSFCMFGGRDAAIY CCHHHHHHHHCCEEEEEECEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHCCCCCCEEE TYQVLKIGQTMYLCHQWYNELWKPVHNEWGISSVIIKHDSFQDRAIMFFLDKEKKSYVLP EEEEHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEC CGVASALYEKKNQKIVLTFFDRKNQLTELNNEEYRISKIEASCDNDNITCYLNDKKIDMQ CHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCCEEEEEEEECCCCCCEEEEECCCEEEEE WSKIGNWREMMIYNLWTYGNGIDWKN HHHCCCHHHEEEEEEEECCCCCCCCC >Mature Secondary Structure MKNIFNILIFSTIINITQAQDNIETLKQIVQSADLFQDFPIIKFIDTNKNLNDTTRYTQI CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEC PYYRDRFEAWKNIQIVTSGVIKFKKDNVVGRSYDVIQIDQQTGKPVPSFCMFGGRDAAIY CCHHHHHHHHCCEEEEEECEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHCCCCCCEEE TYQVLKIGQTMYLCHQWYNELWKPVHNEWGISSVIIKHDSFQDRAIMFFLDKEKKSYVLP EEEEHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEC CGVASALYEKKNQKIVLTFFDRKNQLTELNNEEYRISKIEASCDNDNITCYLNDKKIDMQ CHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCCEEEEEEEECCCCCCEEEEECCCEEEEE WSKIGNWREMMIYNLWTYGNGIDWKN HHHCCCHHHEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA