| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736624
Identifier: 187736624
GI number: 187736624
Start: 2614204
End: 2614962
Strand: Reverse
Name: 187736624
Synonym: Amuc_2147
Alternate gene names: NA
Gene position: 2614962-2614204 (Counterclockwise)
Preceding gene: 187736625
Following gene: 187736622
Centisome position: 98.16
GC content: 51.65
Gene sequence:
>759_bases ATGAAGAAACACCGTTTTTTATTCCCGGCTTCCCTGATGGCCCTTGTGCTGCTTGGCTGCATGGCGGTAGTGTCTTGTTC CAATAATTTCAAACATGTTCCCCAAACAGGATTTATCACTCATCAGGTAAAAAATAAGGATTCCCATATTCCCTTTGACG CGTACTGGAATGCCGATGATAAAAAAATCTGGAATGACCGGGTGAACGGCGTGAATGGGAAAAAAGTCCTGATGGCCGTC GTTCCGGTGGATACAGTGCACATGGATGTGAGGCCGGATACTGCGGAAGGGTTTGATGCCCTGCGCAGCCTGGCGGAATA CTTCCAGAAGAGCGTTGCAACCAGCATGGAAAAGGAGGTTGCCGAAAATCCGCATTTTGAAATGGTGCCTCCGGGAACCA AGGGGGCTTATACGCTGGAACTCGCCATCATTTCCATCACTCCCACAAATGCCAGGGCCGGCATCTTTGTCACGGCGCTG AGCGGCATCAAGGGGGGAGGGCTGGTTAAGCGGTTCATCAAGAAAGGGCACATTGCCATGGCGGGACGCCTGAGGGATGA GTCCGGCCGCATCGTCTCCGAATTTGCGGATTATGAGGAAGACCACAGCTCCCTGCTGGGCGTGGACACCAAAGATTTTA AAAAATACGCCCATCATCAGCGCACTATTGACGAATGGGCCCGGGAAATTACGGATGTGTATTCTTCCACCTACGGGCAC TGGACGCAGAAGCGCATGATATGCCTGAATCCCTTTTAA
Upstream 100 bases:
>100_bases TCTGCCCGGCAGGAGAGCCCCAGCCCGGGATTTTCACCCGCAGGTTTTATTGACAGCTGGTGCCGGGCCATGATAAAAAC GATTCTGCCTGTTACTTGAT
Downstream 100 bases:
>100_bases GGGATGAACACCGGGGTGGCTGCATTGCGGCCGTGCCTTCCGCGGGGCCGGGAATCTTTGCAGAGCGTTCCTCCCGGCGG GAAGCGCGCTGTTTCAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKKHRFLFPASLMALVLLGCMAVVSCSNNFKHVPQTGFITHQVKNKDSHIPFDAYWNADDKKIWNDRVNGVNGKKVLMAV VPVDTVHMDVRPDTAEGFDALRSLAEYFQKSVATSMEKEVAENPHFEMVPPGTKGAYTLELAIISITPTNARAGIFVTAL SGIKGGGLVKRFIKKGHIAMAGRLRDESGRIVSEFADYEEDHSSLLGVDTKDFKKYAHHQRTIDEWAREITDVYSSTYGH WTQKRMICLNPF
Sequences:
>Translated_252_residues MKKHRFLFPASLMALVLLGCMAVVSCSNNFKHVPQTGFITHQVKNKDSHIPFDAYWNADDKKIWNDRVNGVNGKKVLMAV VPVDTVHMDVRPDTAEGFDALRSLAEYFQKSVATSMEKEVAENPHFEMVPPGTKGAYTLELAIISITPTNARAGIFVTAL SGIKGGGLVKRFIKKGHIAMAGRLRDESGRIVSEFADYEEDHSSLLGVDTKDFKKYAHHQRTIDEWAREITDVYSSTYGH WTQKRMICLNPF >Mature_252_residues MKKHRFLFPASLMALVLLGCMAVVSCSNNFKHVPQTGFITHQVKNKDSHIPFDAYWNADDKKIWNDRVNGVNGKKVLMAV VPVDTVHMDVRPDTAEGFDALRSLAEYFQKSVATSMEKEVAENPHFEMVPPGTKGAYTLELAIISITPTNARAGIFVTAL SGIKGGGLVKRFIKKGHIAMAGRLRDESGRIVSEFADYEEDHSSLLGVDTKDFKKYAHHQRTIDEWAREITDVYSSTYGH WTQKRMICLNPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28290; Mature: 28290
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHRFLFPASLMALVLLGCMAVVSCSNNFKHVPQTGFITHQVKNKDSHIPFDAYWNADD CCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCC KKIWNDRVNGVNGKKVLMAVVPVDTVHMDVRPDTAEGFDALRSLAEYFQKSVATSMEKEV HHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AENPHFEMVPPGTKGAYTLELAIISITPTNARAGIFVTALSGIKGGGLVKRFIKKGHIAM HCCCCEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEE AGRLRDESGRIVSEFADYEEDHSSLLGVDTKDFKKYAHHQRTIDEWAREITDVYSSTYGH EEEEECCCCCHHHHHHCCHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WTQKRMICLNPF CCCCEEEEECCC >Mature Secondary Structure MKKHRFLFPASLMALVLLGCMAVVSCSNNFKHVPQTGFITHQVKNKDSHIPFDAYWNADD CCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCC KKIWNDRVNGVNGKKVLMAVVPVDTVHMDVRPDTAEGFDALRSLAEYFQKSVATSMEKEV HHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AENPHFEMVPPGTKGAYTLELAIISITPTNARAGIFVTALSGIKGGGLVKRFIKKGHIAM HCCCCEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEE AGRLRDESGRIVSEFADYEEDHSSLLGVDTKDFKKYAHHQRTIDEWAREITDVYSSTYGH EEEEECCCCCHHHHHHCCHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WTQKRMICLNPF CCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA