| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736620
Identifier: 187736620
GI number: 187736620
Start: 2609863
End: 2610903
Strand: Reverse
Name: 187736620
Synonym: Amuc_2143
Alternate gene names: NA
Gene position: 2610903-2609863 (Counterclockwise)
Preceding gene: 187736622
Following gene: 187736617
Centisome position: 98.0
GC content: 53.7
Gene sequence:
>1041_bases ATGTACGTCCACCTGTCCTCCCCCTTTCTCCAGGCGGTGAGCCTCCATCTCTTTTACCTGGGGAGGGTTCCGTTTTTCCT GGTGCTGGCAGGGTACTTCCTGGGCAGGAACATCACCTGGAACAAGGCTTTTAACCGGGCTTTCTGGCTGTTTATTCCGT TCATGTTCTGGAATGTACTGTACGTGTTCCTTGTCCTGCCTCATGACGGCGCTTCCTTCCGCCTTGAGAATTTAATTGGT ATCCGGGACGTCTTTCTTCCGGGCATGAACCTTTTCTCCGCAGATGACTCCCATGCCGTTCCCCCCATCGGCCCTTCCTG GTTCCTGAGGGACATTATCATTCTCACGTTGCTGACGCCTCTTCTGGTCCGCGTCAAAATCCTGCTGTTTCCTGCGGTGC TCCTCTTTTTCTGTTTCTTCAACACGGCCCCGGACCACACGGAGACGATTTCCATTGGAACCTGTGCTTTTTACCTGCTG GGCGTTGCGCTCAGTTCCCGGCGGATTGACGACATTCATCTGTTGATGAATAAAAAATTCGGCATTTTTTTCTGGGTAAG CATTTTTATGCCCGTTGTACTGATAGCGCTGTATTCCGCCGGAGTGATCCCCCTGTGGAAAGAGACGGCCATTGGCATGC TTCTGGGTGTCATGATGATCATGTACGCAGGCATCTGGATGGAAAAGCACCTGCCCGGCCTGTCTGCGAAAATAGCTTTG CTGGCTCCCGCCTGCTTTCTGACGTTCATGCTGCACTGGCCCATTTACGGTTTCCTGCCTCCCGCCATGAAATCCAGCCT GTTCGCCTTCTTCACGCCGTTGCTGGTGTTTGCGGCCATCGTCCTGTTTTATTTTGCCCTGAAACGTTTTGCCCCGTGCC TTCTGCCGTATCTGGCCCATGTGAAAAATACCGGCCGGCGGCAAGCGCAGCATGGCGCGTGCGACGAAACGATTCCTTTA ATCAGGGGCCTTTCAGGGATGAGTCAATCATCAGAAAGGGACGCCGGGAACCCCATGCCCGGAACACGGGAGAGCTTTTA A
Upstream 100 bases:
>100_bases CAGCCTCCGATTCTTGACACGCTTACCCCCCCCCCCCCCCCCCCCATCAAAACGTGTCTTATGGATTGACGTATCAAGGG TTATTGCAGCCCTTCTGATC
Downstream 100 bases:
>100_bases AGAACCACGGGCAAACGGGTTCCAGGAAGCCGTAGATTGCCAGGTGAAAGGACTCCCGGTACATCCGTTGCTCTTCTTCC GGCTCAGGAAGGTAAATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MYVHLSSPFLQAVSLHLFYLGRVPFFLVLAGYFLGRNITWNKAFNRAFWLFIPFMFWNVLYVFLVLPHDGASFRLENLIG IRDVFLPGMNLFSADDSHAVPPIGPSWFLRDIIILTLLTPLLVRVKILLFPAVLLFFCFFNTAPDHTETISIGTCAFYLL GVALSSRRIDDIHLLMNKKFGIFFWVSIFMPVVLIALYSAGVIPLWKETAIGMLLGVMMIMYAGIWMEKHLPGLSAKIAL LAPACFLTFMLHWPIYGFLPPAMKSSLFAFFTPLLVFAAIVLFYFALKRFAPCLLPYLAHVKNTGRRQAQHGACDETIPL IRGLSGMSQSSERDAGNPMPGTRESF
Sequences:
>Translated_346_residues MYVHLSSPFLQAVSLHLFYLGRVPFFLVLAGYFLGRNITWNKAFNRAFWLFIPFMFWNVLYVFLVLPHDGASFRLENLIG IRDVFLPGMNLFSADDSHAVPPIGPSWFLRDIIILTLLTPLLVRVKILLFPAVLLFFCFFNTAPDHTETISIGTCAFYLL GVALSSRRIDDIHLLMNKKFGIFFWVSIFMPVVLIALYSAGVIPLWKETAIGMLLGVMMIMYAGIWMEKHLPGLSAKIAL LAPACFLTFMLHWPIYGFLPPAMKSSLFAFFTPLLVFAAIVLFYFALKRFAPCLLPYLAHVKNTGRRQAQHGACDETIPL IRGLSGMSQSSERDAGNPMPGTRESF >Mature_346_residues MYVHLSSPFLQAVSLHLFYLGRVPFFLVLAGYFLGRNITWNKAFNRAFWLFIPFMFWNVLYVFLVLPHDGASFRLENLIG IRDVFLPGMNLFSADDSHAVPPIGPSWFLRDIIILTLLTPLLVRVKILLFPAVLLFFCFFNTAPDHTETISIGTCAFYLL GVALSSRRIDDIHLLMNKKFGIFFWVSIFMPVVLIALYSAGVIPLWKETAIGMLLGVMMIMYAGIWMEKHLPGLSAKIAL LAPACFLTFMLHWPIYGFLPPAMKSSLFAFFTPLLVFAAIVLFYFALKRFAPCLLPYLAHVKNTGRRQAQHGACDETIPL IRGLSGMSQSSERDAGNPMPGTRESF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39106; Mature: 39106
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVHLSSPFLQAVSLHLFYLGRVPFFLVLAGYFLGRNITWNKAFNRAFWLFIPFMFWNVL CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH YVFLVLPHDGASFRLENLIGIRDVFLPGMNLFSADDSHAVPPIGPSWFLRDIIILTLLTP HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LLVRVKILLFPAVLLFFCFFNTAPDHTETISIGTCAFYLLGVALSSRRIDDIHLLMNKKF HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHCCCC GIFFWVSIFMPVVLIALYSAGVIPLWKETAIGMLLGVMMIMYAGIWMEKHLPGLSAKIAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LAPACFLTFMLHWPIYGFLPPAMKSSLFAFFTPLLVFAAIVLFYFALKRFAPCLLPYLAH HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKNTGRRQAQHGACDETIPLIRGLSGMSQSSERDAGNPMPGTRESF HHHCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYVHLSSPFLQAVSLHLFYLGRVPFFLVLAGYFLGRNITWNKAFNRAFWLFIPFMFWNVL CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH YVFLVLPHDGASFRLENLIGIRDVFLPGMNLFSADDSHAVPPIGPSWFLRDIIILTLLTP HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LLVRVKILLFPAVLLFFCFFNTAPDHTETISIGTCAFYLLGVALSSRRIDDIHLLMNKKF HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHCCCC GIFFWVSIFMPVVLIALYSAGVIPLWKETAIGMLLGVMMIMYAGIWMEKHLPGLSAKIAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LAPACFLTFMLHWPIYGFLPPAMKSSLFAFFTPLLVFAAIVLFYFALKRFAPCLLPYLAH HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKNTGRRQAQHGACDETIPLIRGLSGMSQSSERDAGNPMPGTRESF HHHCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA