| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is hisC
Identifier: 187736616
GI number: 187736616
Start: 2605768
End: 2606859
Strand: Reverse
Name: hisC
Synonym: Amuc_2138
Alternate gene names: 187736616
Gene position: 2606859-2605768 (Counterclockwise)
Preceding gene: 187736617
Following gene: 187736615
Centisome position: 97.85
GC content: 58.88
Gene sequence:
>1092_bases ATGAGTATTGAGAGTTTCGCAAATCAGCATGTGCTGGAGTTGGTGGCTTATCAGCCGGGCAAGCCGATTGAGGAGACGGC CCGGGAACTGGGCCTGAATCCCCATGATATTGTGAAACTGGCGTCTAATGAAAATCCTCTGGGGCCGTCCCCGAAGGCGG TGGAGGCGATTGCCCGTGCGGCTGCCGGCGTGAACATTTATCCGGACGGAGCGGCTTTCCGCCTGCGTTCCGCTATTGCG GAGTTCTGCGGCGTGGAGTTCGGCCAGACGGTAGTGGGCACGGGCAGCAGCGAAGTGATTGAACTGATCTGCCATGCCCT GCTGAATCCCCGTGCGGAGGTGGTGGCCGCCAAACACGCCTTTTCCATGTACCCTATCATGTCCAAGCTGTTTGGCGCCG CGTACGTGGAAGTGCCCAACAAGGAGGACTGGACGCATGACCTGGACGGCTTCCTGGCCGCTATTACGGAGAATACGCGC GTCGTGTTCATTACGAATCCCACCAATCCCGTAGGCACCGTAGTGGGACAGCAGGAAATAGACGATTTCATGGCGAAGGT CCCGGAACATGTGCTGGTGGTCTTTGACGAGGCGTACCGGGAGTTTTCCGACAATCCTCCGGATACCCTCAAATTTGTGC GAGAAGGCCGCAACGTGGTTGTTCTGCGCACCTTCTCCAAGGCTTACGGCCTGGCGGGGCTGCGCGTGGGCTACGGCATT GCGCCGGAACCGGTTTGCAGCATGCTGCACAAGGCGCGTGCTCCGTTCAACCTGCATGTTCTGGCCCAGGAGGCCGCCCT GGCCGCCCTGGAGGACCGGGAGCATGTGCGCCGCACTGTGGAGAATAATAAGGAAGGCATGCGTTTTTATGAGCAGGCTT TCCGGGAAATGGGCCTGGAATGGATTCCCAGCCAGGGCAACTTTATCCTGGTGAAAGTGGGCCGGGGCAAGCAGGTGTTC CAGGATATGCTTGCCAGGGGAGTCATCGTCCGCGCGCAGGACGGTTACGGCCTGCCGGAATGGATACGCATCAGCATAGG CACTCCTGCGGAGAACGCCCGCTGCATTGAGGTATTGAAAGAGGTTCTTTAA
Upstream 100 bases:
>100_bases GCCAGCGCAGATTCTCTAAACGGCTGTCATCTTCCCAGGGGCCGGCCGGATGGAAATCCGTATTGCCAGAAACGGGGAAT GGCGGTAACATTCCGCCGCT
Downstream 100 bases:
>100_bases ACAGTTTTTCCGTTTTTCGTGTCTCACCCTGCATGATGATCTCCCCGGAACAGTATATTGACGGTCTGGAATGGCGTTAC GCCTGCAAAAAATTTGATCC
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSIESFANQHVLELVAYQPGKPIEETARELGLNPHDIVKLASNENPLGPSPKAVEAIARAAAGVNIYPDGAAFRLRSAIA EFCGVEFGQTVVGTGSSEVIELICHALLNPRAEVVAAKHAFSMYPIMSKLFGAAYVEVPNKEDWTHDLDGFLAAITENTR VVFITNPTNPVGTVVGQQEIDDFMAKVPEHVLVVFDEAYREFSDNPPDTLKFVREGRNVVVLRTFSKAYGLAGLRVGYGI APEPVCSMLHKARAPFNLHVLAQEAALAALEDREHVRRTVENNKEGMRFYEQAFREMGLEWIPSQGNFILVKVGRGKQVF QDMLARGVIVRAQDGYGLPEWIRISIGTPAENARCIEVLKEVL
Sequences:
>Translated_363_residues MSIESFANQHVLELVAYQPGKPIEETARELGLNPHDIVKLASNENPLGPSPKAVEAIARAAAGVNIYPDGAAFRLRSAIA EFCGVEFGQTVVGTGSSEVIELICHALLNPRAEVVAAKHAFSMYPIMSKLFGAAYVEVPNKEDWTHDLDGFLAAITENTR VVFITNPTNPVGTVVGQQEIDDFMAKVPEHVLVVFDEAYREFSDNPPDTLKFVREGRNVVVLRTFSKAYGLAGLRVGYGI APEPVCSMLHKARAPFNLHVLAQEAALAALEDREHVRRTVENNKEGMRFYEQAFREMGLEWIPSQGNFILVKVGRGKQVF QDMLARGVIVRAQDGYGLPEWIRISIGTPAENARCIEVLKEVL >Mature_362_residues SIESFANQHVLELVAYQPGKPIEETARELGLNPHDIVKLASNENPLGPSPKAVEAIARAAAGVNIYPDGAAFRLRSAIAE FCGVEFGQTVVGTGSSEVIELICHALLNPRAEVVAAKHAFSMYPIMSKLFGAAYVEVPNKEDWTHDLDGFLAAITENTRV VFITNPTNPVGTVVGQQEIDDFMAKVPEHVLVVFDEAYREFSDNPPDTLKFVREGRNVVVLRTFSKAYGLAGLRVGYGIA PEPVCSMLHKARAPFNLHVLAQEAALAALEDREHVRRTVENNKEGMRFYEQAFREMGLEWIPSQGNFILVKVGRGKQVFQ DMLARGVIVRAQDGYGLPEWIRISIGTPAENARCIEVLKEVL
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=371, Percent_Identity=29.1105121293801, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1788627, Length=308, Percent_Identity=25.974025974026, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1786816, Length=271, Percent_Identity=25.830258302583, Blast_Score=65, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6322075, Length=361, Percent_Identity=26.0387811634349, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6322401, Length=253, Percent_Identity=26.8774703557312, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_AKKM8 (B2UPR9)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001878728.1 - ProteinModelPortal: B2UPR9 - SMR: B2UPR9 - GeneID: 6273705 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_2138 - HOGENOM: HBG646350 - OMA: KLIYIAN - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39996; Mature: 39865
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIESFANQHVLELVAYQPGKPIEETARELGLNPHDIVKLASNENPLGPSPKAVEAIARA CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHEEECCCCCCCCCCHHHHHHHHHH AAGVNIYPDGAAFRLRSAIAEFCGVEFGQTVVGTGSSEVIELICHALLNPRAEVVAAKHA HCCCEECCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHH FSMYPIMSKLFGAAYVEVPNKEDWTHDLDGFLAAITENTRVVFITNPTNPVGTVVGQQEI HHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHEECCCEEEEEECCCCCHHHHCCHHHH DDFMAKVPEHVLVVFDEAYREFSDNPPDTLKFVREGRNVVVLRTFSKAYGLAGLRVGYGI HHHHHHCCHHEEEEEHHHHHHHCCCCHHHHHHHHCCCCEEEEEECHHHHCCCHHHCCCCC APEPVCSMLHKARAPFNLHVLAQEAALAALEDREHVRRTVENNKEGMRFYEQAFREMGLE CCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCE WIPSQGNFILVKVGRGKQVFQDMLARGVIVRAQDGYGLPEWIRISIGTPAENARCIEVLK EECCCCCEEEEEECCCHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHH EVL HHC >Mature Secondary Structure SIESFANQHVLELVAYQPGKPIEETARELGLNPHDIVKLASNENPLGPSPKAVEAIARA CHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHEEECCCCCCCCCCHHHHHHHHHH AAGVNIYPDGAAFRLRSAIAEFCGVEFGQTVVGTGSSEVIELICHALLNPRAEVVAAKHA HCCCEECCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHH FSMYPIMSKLFGAAYVEVPNKEDWTHDLDGFLAAITENTRVVFITNPTNPVGTVVGQQEI HHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHEECCCEEEEEECCCCCHHHHCCHHHH DDFMAKVPEHVLVVFDEAYREFSDNPPDTLKFVREGRNVVVLRTFSKAYGLAGLRVGYGI HHHHHHCCHHEEEEEHHHHHHHCCCCHHHHHHHHCCCCEEEEEECHHHHCCCHHHCCCCC APEPVCSMLHKARAPFNLHVLAQEAALAALEDREHVRRTVENNKEGMRFYEQAFREMGLE CCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCE WIPSQGNFILVKVGRGKQVFQDMLARGVIVRAQDGYGLPEWIRISIGTPAENARCIEVLK EECCCCCEEEEEECCCHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHH EVL HHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA