| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736611
Identifier: 187736611
GI number: 187736611
Start: 2599892
End: 2600839
Strand: Direct
Name: 187736611
Synonym: Amuc_2133
Alternate gene names: NA
Gene position: 2599892-2600839 (Clockwise)
Preceding gene: 187736610
Following gene: 187736613
Centisome position: 97.59
GC content: 60.86
Gene sequence:
>948_bases ATGAGCAATATCAACCCATTCATTCTAACAGGGATGATGCCGCTTTCAGCCTCATCCATGAACCGTGTCTCCTACATGTG CCCGGTCACCATCAGCAATGATGTAGTGCAGGGCCAGACGGACATTCAGGATTCCCTTACCGTTGATTCCGGCGGAAATC TTTACATCATCAACGCTCCTGTTTACGTGGGCGGCCCCAACCAGCCGGACCACGGGCACCGCACCGCCCACCTCGTCATC CGGAACGGAGGCGCCATGACGCTCCTGGGCAATCTGCCGGACCATATGACCGTTTTCCTGGGGGACAAAGCCAACGGCAG CCTGGAAATCAACGGCGGCCGCCTTCTGATGGGCCAGGGGCGCATTCAGGGCGCCAGGGAGCATGAAGGCAGAATCGCCA TGACGGACGGCTGGCTCTTCGCCTCGGAAGTGGATCTGCCGGCGGAGGGCTCGGAACTCGTGATCAGGCACGGCCTGATG CGTATCAGAAAACTCTCCGGCAATGCATCCACCCGCATTTACGGAGGCGTTCTGCACGTAAAGGAGGAAGCCCGCGCCAG CCGCATCCATCTGATAGACGACGGCGTGCTGCTGCTGGGCAGCGTCACCAGCCAGCCTTCCGCGGACGTCATGGCCGGAG CGGGCATCAACTTCCGCGGGGACGGCGGAGCGCTGGTAATCCGCATCCCCCACCCGGAAAACGCTCTGACGCGCACGCGG GAAGCGGAACATGTCTTTGACGAACTGCTCCGGAGGGGCAAGCTCTTTCATGACAGTGAACCCATGACCAGCTTCCAGGG GTTCCATATGAGGGAGTTCACGGGGCATGACGGACTGGCGTACGCCGCGCTGCGCCCCTCCGCCCAGCTGAACGCGGAAC AGAATCAGGTTACCCGCCTGCTCCATACGTTCATGTACGGCGGCAGTGAAAAGGACATGCCCATCTGA
Upstream 100 bases:
>100_bases AGGGAAATTTACGCGAACACTTTCCCCGGACGGATGGTCTAATATCATTGGAGCGCATCCATCGCGCCTCAAACGTCAAA CCAACTATGTAACCAGAGCC
Downstream 100 bases:
>100_bases ACCCCTCCGGCAAATGGAAAGCCCTCATCAAAAAACCGCCGGCATTCCGTACCGGCGGTTTTTTCATCTGTTGATCTGCT GAAAAACGGAAAAACGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSNINPFILTGMMPLSASSMNRVSYMCPVTISNDVVQGQTDIQDSLTVDSGGNLYIINAPVYVGGPNQPDHGHRTAHLVI RNGGAMTLLGNLPDHMTVFLGDKANGSLEINGGRLLMGQGRIQGAREHEGRIAMTDGWLFASEVDLPAEGSELVIRHGLM RIRKLSGNASTRIYGGVLHVKEEARASRIHLIDDGVLLLGSVTSQPSADVMAGAGINFRGDGGALVIRIPHPENALTRTR EAEHVFDELLRRGKLFHDSEPMTSFQGFHMREFTGHDGLAYAALRPSAQLNAEQNQVTRLLHTFMYGGSEKDMPI
Sequences:
>Translated_315_residues MSNINPFILTGMMPLSASSMNRVSYMCPVTISNDVVQGQTDIQDSLTVDSGGNLYIINAPVYVGGPNQPDHGHRTAHLVI RNGGAMTLLGNLPDHMTVFLGDKANGSLEINGGRLLMGQGRIQGAREHEGRIAMTDGWLFASEVDLPAEGSELVIRHGLM RIRKLSGNASTRIYGGVLHVKEEARASRIHLIDDGVLLLGSVTSQPSADVMAGAGINFRGDGGALVIRIPHPENALTRTR EAEHVFDELLRRGKLFHDSEPMTSFQGFHMREFTGHDGLAYAALRPSAQLNAEQNQVTRLLHTFMYGGSEKDMPI >Mature_314_residues SNINPFILTGMMPLSASSMNRVSYMCPVTISNDVVQGQTDIQDSLTVDSGGNLYIINAPVYVGGPNQPDHGHRTAHLVIR NGGAMTLLGNLPDHMTVFLGDKANGSLEINGGRLLMGQGRIQGAREHEGRIAMTDGWLFASEVDLPAEGSELVIRHGLMR IRKLSGNASTRIYGGVLHVKEEARASRIHLIDDGVLLLGSVTSQPSADVMAGAGINFRGDGGALVIRIPHPENALTRTRE AEHVFDELLRRGKLFHDSEPMTSFQGFHMREFTGHDGLAYAALRPSAQLNAEQNQVTRLLHTFMYGGSEKDMPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34187; Mature: 34056
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNINPFILTGMMPLSASSMNRVSYMCPVTISNDVVQGQTDIQDSLTVDSGGNLYIINAP CCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCCCCCEEEECCCCEEEEECC VYVGGPNQPDHGHRTAHLVIRNGGAMTLLGNLPDHMTVFLGDKANGSLEINGGRLLMGQG EEECCCCCCCCCCEEEEEEEECCCEEEEECCCCCCEEEEEECCCCCEEEECCCEEEEECC RIQGAREHEGRIAMTDGWLFASEVDLPAEGSELVIRHGLMRIRKLSGNASTRIYGGVLHV CCCCCCCCCCEEEEECCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEE KEEARASRIHLIDDGVLLLGSVTSQPSADVMAGAGINFRGDGGALVIRIPHPENALTRTR ECCCCCCEEEEEECCEEEEEECCCCCCCCEEECCCCEEECCCCEEEEEECCCCCHHHHHH EAEHVFDELLRRGKLFHDSEPMTSFQGFHMREFTGHDGLAYAALRPSAQLNAEQNQVTRL HHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHH LHTFMYGGSEKDMPI HHHHHCCCCCCCCCC >Mature Secondary Structure SNINPFILTGMMPLSASSMNRVSYMCPVTISNDVVQGQTDIQDSLTVDSGGNLYIINAP CCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCCCCCEEEECCCCEEEEECC VYVGGPNQPDHGHRTAHLVIRNGGAMTLLGNLPDHMTVFLGDKANGSLEINGGRLLMGQG EEECCCCCCCCCCEEEEEEEECCCEEEEECCCCCCEEEEEECCCCCEEEECCCEEEEECC RIQGAREHEGRIAMTDGWLFASEVDLPAEGSELVIRHGLMRIRKLSGNASTRIYGGVLHV CCCCCCCCCCEEEEECCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEE KEEARASRIHLIDDGVLLLGSVTSQPSADVMAGAGINFRGDGGALVIRIPHPENALTRTR ECCCCCCEEEEEECCEEEEEECCCCCCCCEEECCCCEEECCCCEEEEEECCCCCHHHHHH EAEHVFDELLRRGKLFHDSEPMTSFQGFHMREFTGHDGLAYAALRPSAQLNAEQNQVTRL HHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHH LHTFMYGGSEKDMPI HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA