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The map label for this gene is hupD [H]

Identifier: 187736609

GI number: 187736609

Start: 2598888

End: 2599433

Strand: Direct

Name: hupD [H]

Synonym: Amuc_2131

Alternate gene names: 187736609

Gene position: 2598888-2599433 (Clockwise)

Preceding gene: 187736608

Following gene: 187736610

Centisome position: 97.55

GC content: 67.03

Gene sequence:

>546_bases
ATGAAATTGGAGCCATACACGGAAGAACTGCGGGGCTGCCCCGTGAAGGGAAATGCCTATCCCGTGCTCGTGCTGGGCAT
CGGAAACCCGCTCATGGGGGACGACGGCGCAGGCGTGGAGCTGGCCCACCGCCTCCAGGAACGGGACTACGGCCCGCTGG
TCCACGTGGAGGAAGGGGGAACGCAGGGCATGACCCTGCTTCCCCTGCTGGAAGATGCGGACACGCTCATCCTGCTGGAC
GCCGTCAGGACGGGGGCCCTGCCGGGAACCGTCGTCACGCGCAGCCGGGAAGAACTGCCGCGCCACTTTTCCCGCGTTAT
GTCTCCCCACCAGATAGGCATGAAGGAAGTGCTGGGGGCGGCCCAGCTGTGCGGCACCCTGCCGCGCGCCATCACGCTGG
TGGGAGTGGAGGCCCTGCATACGGATTTCTGCCGCCCCATGTCCGCGGAGGTGCAGGAAGCCTTGCCGAAGGCGCTGGAC
ACGGCGGAGGCCCTCATCGCCCGCGCCCTGGCGGAACATCAGGCCCGGAAAAACGCCCATGCATGA

Upstream 100 bases:

>100_bases
GGACCGGGACGGCACCATCTCCTCCATGTTCAGCGGCGGACGATGGCTGCGCAAGGGCGTCAAATTCCGGGATGAATAAC
CTCTCCGCCCTCCCCTTGAC

Downstream 100 bases:

>100_bases
AGTAGGCATCATGGAAGGCGCGCTGGACATGGCCCGGCGACTTATGGAAAAACGCGGAGGAAACAGGCTGAGGCGCGTGC
ACATGACCATCGGCAGCCTG

Product: hydrogenase maturation protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKLEPYTEELRGCPVKGNAYPVLVLGIGNPLMGDDGAGVELAHRLQERDYGPLVHVEEGGTQGMTLLPLLEDADTLILLD
AVRTGALPGTVVTRSREELPRHFSRVMSPHQIGMKEVLGAAQLCGTLPRAITLVGVEALHTDFCRPMSAEVQEALPKALD
TAEALIARALAEHQARKNAHA

Sequences:

>Translated_181_residues
MKLEPYTEELRGCPVKGNAYPVLVLGIGNPLMGDDGAGVELAHRLQERDYGPLVHVEEGGTQGMTLLPLLEDADTLILLD
AVRTGALPGTVVTRSREELPRHFSRVMSPHQIGMKEVLGAAQLCGTLPRAITLVGVEALHTDFCRPMSAEVQEALPKALD
TAEALIARALAEHQARKNAHA
>Mature_181_residues
MKLEPYTEELRGCPVKGNAYPVLVLGIGNPLMGDDGAGVELAHRLQERDYGPLVHVEEGGTQGMTLLPLLEDADTLILLD
AVRTGALPGTVVTRSREELPRHFSRVMSPHQIGMKEVLGAAQLCGTLPRAITLVGVEALHTDFCRPMSAEVQEALPKALD
TAEALIARALAEHQARKNAHA

Specific function: Not known. Could be involved in the processing of hydrogenase [H]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A31 family [H]

Homologues:

Organism=Escherichia coli, GI1787209, Length=138, Percent_Identity=41.304347826087, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1789367, Length=144, Percent_Identity=38.8888888888889, Blast_Score=87, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004419
- InterPro:   IPR000671 [H]

Pfam domain/function: PF01750 HycI [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 19456; Mature: 19456

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLEPYTEELRGCPVKGNAYPVLVLGIGNPLMGDDGAGVELAHRLQERDYGPLVHVEEGG
CCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCC
TQGMTLLPLLEDADTLILLDAVRTGALPGTVVTRSREELPRHFSRVMSPHQIGMKEVLGA
CCCEEEEEECCCCCCEEEEEHHHHCCCCCHHHHCCHHHHHHHHHHHCCCHHCCHHHHHHH
AQLCGTLPRAITLVGVEALHTDFCRPMSAEVQEALPKALDTAEALIARALAEHQARKNAH
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
A
C
>Mature Secondary Structure
MKLEPYTEELRGCPVKGNAYPVLVLGIGNPLMGDDGAGVELAHRLQERDYGPLVHVEEGG
CCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCC
TQGMTLLPLLEDADTLILLDAVRTGALPGTVVTRSREELPRHFSRVMSPHQIGMKEVLGA
CCCEEEEEECCCCCCEEEEEHHHHCCCCCHHHHCCHHHHHHHHHHHCCCHHCCHHHHHHH
AQLCGTLPRAITLVGVEALHTDFCRPMSAEVQEALPKALDTAEALIARALAEHQARKNAH
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Ni [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]