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The map label for this gene is rsmI [H]

Identifier: 187735114

GI number: 187735114

Start: 716503

End: 717204

Strand: Reverse

Name: rsmI [H]

Synonym: Amuc_0608

Alternate gene names: 187735114

Gene position: 717204-716503 (Counterclockwise)

Preceding gene: 187735115

Following gene: 187735112

Centisome position: 26.92

GC content: 59.69

Gene sequence:

>702_bases
ATGGAGAAAGTGGAATACAGCGTTTATTTTGTTCCGGTGCCGATCGGCAACCGGGCGGACATCACCCTGCGGGCGCTGGA
CGTGCTGCGCAAGGTGGATGTCATTGCGTGTGAGGACACCCGCCATTCCGGTCTTCTGCTTTCCCATTATGAAATCCGCA
AACCGCTGGTAAGCATGCATGACCACAATGAGCAGCCGCGTGCCGGGGAAATTGCGGCGCGCGCGGCCGGCGGAGAAAGC
TTTGCCGTGATCAGTGATGCGGGCATGCCTGGCGTGAGCGATCCGGGCTATCGTCTCATTCAGACCCTCAAGGAAAAGGG
AGTAAGCTTCACCGTCCTTCCCGGGCCATCCGCCGTGGTGACGGCATTGGTGGGGTCCGGACTGCCTACGGACGCATTCT
TCTTCGGCGGCTTTCTGCCCGTCAAATCCGGGAAAAAAAACGCTGTGCTCCAAACGGCAGTGGAAGCTTCCCATACCAGT
ATTTTTTATGAATCCCCCCATCGCATCGTCAAAACCGTGCAGGCTCTGGCGGCGTTGGATCCGGATATTCCCGTCTGCGT
AGCCAGGGAACTGACAAAAACCTTTGAAACTTACCATCGCGGTCCGGCCTCCCGGCTGGCGGCGGAATTTGCGGAACGCC
CCCCCAGGGGGGAAATCGTGCTGCTGGTGGGCGGCGTCAATGCCCCGCGGGCTACCCGGTGA

Upstream 100 bases:

>100_bases
GCACGAATGCCCTTTCCTATGCGGCCCGTCTGGTGGCTACTTCCATTGCGGAAACCCTTACCAATGGCTAATCCCGCCCG
GTTCAGGAAAATCTGTGCTT

Downstream 100 bases:

>100_bases
CGGGCCGGAAGCATCATGTCAATAGCTGACCGTCACCTTGACCGGGCGGTGGTCAGAGGCGGCGGGAGCTTCAATTACCC
TGCGTTCCTTCACATGGAAC

Product: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MEKVEYSVYFVPVPIGNRADITLRALDVLRKVDVIACEDTRHSGLLLSHYEIRKPLVSMHDHNEQPRAGEIAARAAGGES
FAVISDAGMPGVSDPGYRLIQTLKEKGVSFTVLPGPSAVVTALVGSGLPTDAFFFGGFLPVKSGKKNAVLQTAVEASHTS
IFYESPHRIVKTVQALAALDPDIPVCVARELTKTFETYHRGPASRLAAEFAERPPRGEIVLLVGGVNAPRATR

Sequences:

>Translated_233_residues
MEKVEYSVYFVPVPIGNRADITLRALDVLRKVDVIACEDTRHSGLLLSHYEIRKPLVSMHDHNEQPRAGEIAARAAGGES
FAVISDAGMPGVSDPGYRLIQTLKEKGVSFTVLPGPSAVVTALVGSGLPTDAFFFGGFLPVKSGKKNAVLQTAVEASHTS
IFYESPHRIVKTVQALAALDPDIPVCVARELTKTFETYHRGPASRLAAEFAERPPRGEIVLLVGGVNAPRATR
>Mature_233_residues
MEKVEYSVYFVPVPIGNRADITLRALDVLRKVDVIACEDTRHSGLLLSHYEIRKPLVSMHDHNEQPRAGEIAARAAGGES
FAVISDAGMPGVSDPGYRLIQTLKEKGVSFTVLPGPSAVVTALVGSGLPTDAFFFGGFLPVKSGKKNAVLQTAVEASHTS
IFYESPHRIVKTVQALAALDPDIPVCVARELTKTFETYHRGPASRLAAEFAERPPRGEIVLLVGGVNAPRATR

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=227, Percent_Identity=49.3392070484581, Blast_Score=209, Evalue=1e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 25056; Mature: 25056

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVEYSVYFVPVPIGNRADITLRALDVLRKVDVIACEDTRHSGLLLSHYEIRKPLVSMH
CCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCEEEECCCCCCCEEEEHHHHHHHHHHHH
DHNEQPRAGEIAARAAGGESFAVISDAGMPGVSDPGYRLIQTLKEKGVSFTVLPGPSAVV
CCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHH
TALVGSGLPTDAFFFGGFLPVKSGKKNAVLQTAVEASHTSIFYESPHRIVKTVQALAALD
HHHHCCCCCCHHHHHCCEEEECCCCCCHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHCC
PDIPVCVARELTKTFETYHRGPASRLAAEFAERPPRGEIVLLVGGVNAPRATR
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MEKVEYSVYFVPVPIGNRADITLRALDVLRKVDVIACEDTRHSGLLLSHYEIRKPLVSMH
CCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCEEEECCCCCCCEEEEHHHHHHHHHHHH
DHNEQPRAGEIAARAAGGESFAVISDAGMPGVSDPGYRLIQTLKEKGVSFTVLPGPSAVV
CCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHH
TALVGSGLPTDAFFFGGFLPVKSGKKNAVLQTAVEASHTSIFYESPHRIVKTVQALAALD
HHHHCCCCCCHHHHHCCEEEECCCCCCHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHCC
PDIPVCVARELTKTFETYHRGPASRLAAEFAERPPRGEIVLLVGGVNAPRATR
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]