| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is yuaG [H]
Identifier: 187735084
GI number: 187735084
Start: 679432
End: 680934
Strand: Direct
Name: yuaG [H]
Synonym: Amuc_0578
Alternate gene names: 187735084
Gene position: 679432-680934 (Clockwise)
Preceding gene: 187735083
Following gene: 187735085
Centisome position: 25.5
GC content: 59.35
Gene sequence:
>1503_bases ATGGACAAAATCATCCCCATCGCCATTCTGGTTCTCTTCATCATTCTGACCGCTTCCTGGCTGTTCAGCCGCTACCGCAT GTGCCCTCCGGACAAAATCCTCATCGTCTTCGGGAAAGTAGGCACAGGCCAGCCGGCCAAATGTTACCACGGCGGCTCCA CCTTCGTGCTTCCGGTTCTCCAGTCCTATAGCTACCTGGATCTGAACCCTATCAATATTGACGTGCCCCTCCAGGGCGCC CTTTCCTCCCAGAACATACGCGTGGATGTGCCCTCCTCCTTCATCGTGGGCATCTCCACCCTCCCTGAAATCATGCAGAA CGCCGCTGCGCGCCTGCTGGGCCGCTCCCGGGAGGAAATCCGCAACCTGGCCGCGGAAATCATCATGGGGCAGATGCGCG TGGTGATTGCCTCCATGACCATTGAGGAAATCAATTCCGACCGCGAAAAACTCATCAAGGGCATCACGGAAGGCGTGGAC GTGGAACTGCACAAAGTGGGCCTCCATCTCATCAACGCCAATATCACGGACATCCAGGACGCTTCCGGCTACATCAACGC CCTGGGCAAGGAAGCCGCTGCGCGCGCCATCAATGACGCCACCATCAAGGTGGCGGAAGAAACGCGCCGCGGGGAAATCG GCAAAGCGGAAGCGGAAAAGGACCAGACCATCCAGGTGGCGAACGCCCGCGCCATCGCCATTGAGGGCCAGAACGAAGCC CAGATTAAAATTGCGGAATCCGCCGCCAAGCTGCAAGTGAAGCAGGCGGAGGCCAAAAAGCTGGCGGAAGTGGCCCAGAA GGTGCAGGAGGCTAAAACCCTGGAAGAAGCCTACCAGGCGGAAAAAGAAGCGGAATTGAAGCGCGCGGAACGCGAACGCG CCACGCAGGAAGCCAACATCCTGGTAACGGCCCGCATTGAAAAGAGCCAGCGCGAAGTGCAGGCCCAGGCCACGGCGGAA GTACTCAAACTGGAACAGGAAGGCAAGGCGCAGGCTCTGCTCATCCAGCGCAGGGCGGAAGCGGAAGCCATCCGCCAACT GGCGGAAGGCGAAGCCCAGGCTACCCTCCTGAAGAAAAAGGCGGAAGGGGAAGGCATGGAAATGGTGGGACGCGGTGAAG CGGCCGCGATTGAAGCCGTGCTGGAAGGCAAGGCCCGCGGTTTTCAGCAGATCGTCCAGGCGGCAGGTTCTTCCGAGGCC GCTTCCAACCTGCTGGTGACGGAACAGCTTACCAAGATTGTGGAGCTCCAGTCCGGCGCCATTAAGGGGTTGAAATTCGA CAAGGTAGTCGTCATGGGCAATGGAGGGAACTCCTCTGTGGGAGGATTCGTCCAGAATCTGGTAAAGGATACGCTGCCCC TTCATGAACTCGGCAAAAGCGTAGGGCTGGAATTGCCCGCTTTTCTGGGCAAACCCATGGAAGGGAAAACCGCAGCTTCC TCCCCTGCTCCCGCAGCCGATGCCCCGGCGGCAGATACCGCAACCGCCGTCAACCCGAGTTAG
Upstream 100 bases:
>100_bases CTCCGGAACCCCGGTGGAAGTGGTAGCCGTCACTGCGGGAATCGTCACCGTCAAACCTCTTCATTAACAAACACCCCAAT CATCATACCCCAAGCCGACT
Downstream 100 bases:
>100_bases CCCCTTCATCCCCGCCTTCCTGACGGCAACCGCCTCCCCCCCCCCCCCCGGATAGACAGGGCAGATCTGGACAGCATTGT CCATATTGACGCAGGGCGCA
Product: band 7 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MDKIIPIAILVLFIILTASWLFSRYRMCPPDKILIVFGKVGTGQPAKCYHGGSTFVLPVLQSYSYLDLNPINIDVPLQGA LSSQNIRVDVPSSFIVGISTLPEIMQNAAARLLGRSREEIRNLAAEIIMGQMRVVIASMTIEEINSDREKLIKGITEGVD VELHKVGLHLINANITDIQDASGYINALGKEAAARAINDATIKVAEETRRGEIGKAEAEKDQTIQVANARAIAIEGQNEA QIKIAESAAKLQVKQAEAKKLAEVAQKVQEAKTLEEAYQAEKEAELKRAERERATQEANILVTARIEKSQREVQAQATAE VLKLEQEGKAQALLIQRRAEAEAIRQLAEGEAQATLLKKKAEGEGMEMVGRGEAAAIEAVLEGKARGFQQIVQAAGSSEA ASNLLVTEQLTKIVELQSGAIKGLKFDKVVVMGNGGNSSVGGFVQNLVKDTLPLHELGKSVGLELPAFLGKPMEGKTAAS SPAPAADAPAADTATAVNPS
Sequences:
>Translated_500_residues MDKIIPIAILVLFIILTASWLFSRYRMCPPDKILIVFGKVGTGQPAKCYHGGSTFVLPVLQSYSYLDLNPINIDVPLQGA LSSQNIRVDVPSSFIVGISTLPEIMQNAAARLLGRSREEIRNLAAEIIMGQMRVVIASMTIEEINSDREKLIKGITEGVD VELHKVGLHLINANITDIQDASGYINALGKEAAARAINDATIKVAEETRRGEIGKAEAEKDQTIQVANARAIAIEGQNEA QIKIAESAAKLQVKQAEAKKLAEVAQKVQEAKTLEEAYQAEKEAELKRAERERATQEANILVTARIEKSQREVQAQATAE VLKLEQEGKAQALLIQRRAEAEAIRQLAEGEAQATLLKKKAEGEGMEMVGRGEAAAIEAVLEGKARGFQQIVQAAGSSEA ASNLLVTEQLTKIVELQSGAIKGLKFDKVVVMGNGGNSSVGGFVQNLVKDTLPLHELGKSVGLELPAFLGKPMEGKTAAS SPAPAADAPAADTATAVNPS >Mature_500_residues MDKIIPIAILVLFIILTASWLFSRYRMCPPDKILIVFGKVGTGQPAKCYHGGSTFVLPVLQSYSYLDLNPINIDVPLQGA LSSQNIRVDVPSSFIVGISTLPEIMQNAAARLLGRSREEIRNLAAEIIMGQMRVVIASMTIEEINSDREKLIKGITEGVD VELHKVGLHLINANITDIQDASGYINALGKEAAARAINDATIKVAEETRRGEIGKAEAEKDQTIQVANARAIAIEGQNEA QIKIAESAAKLQVKQAEAKKLAEVAQKVQEAKTLEEAYQAEKEAELKRAERERATQEANILVTARIEKSQREVQAQATAE VLKLEQEGKAQALLIQRRAEAEAIRQLAEGEAQATLLKKKAEGEGMEMVGRGEAAAIEAVLEGKARGFQQIVQAAGSSEA ASNLLVTEQLTKIVELQSGAIKGLKFDKVVVMGNGGNSSVGGFVQNLVKDTLPLHELGKSVGLELPAFLGKPMEGKTAAS SPAPAADAPAADTATAVNPS
Specific function: Unknown
COG id: COG2268
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yqiK and Synechocystis PCC 6803 sll1021 [H]
Homologues:
Organism=Homo sapiens, GI5031699, Length=467, Percent_Identity=26.9807280513919, Blast_Score=117, Evalue=4e-26, Organism=Homo sapiens, GI94538362, Length=435, Percent_Identity=27.3563218390805, Blast_Score=110, Evalue=3e-24, Organism=Escherichia coli, GI1789430, Length=326, Percent_Identity=26.9938650306748, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI17137546, Length=341, Percent_Identity=29.3255131964809, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24653894, Length=345, Percent_Identity=28.9855072463768, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24642033, Length=450, Percent_Identity=26, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI24642031, Length=450, Percent_Identity=26, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI24642029, Length=463, Percent_Identity=25.4859611231102, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24642027, Length=463, Percent_Identity=25.4859611231102, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24642061, Length=377, Percent_Identity=27.3209549071618, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI281360882, Length=353, Percent_Identity=26.628895184136, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 53488; Mature: 53488
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKIIPIAILVLFIILTASWLFSRYRMCPPDKILIVFGKVGTGQPAKCYHGGSTFVLPVL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEECCCEEHHHHH QSYSYLDLNPINIDVPLQGALSSQNIRVDVPSSFIVGISTLPEIMQNAAARLLGRSREEI HCCCCCCCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH RNLAAEIIMGQMRVVIASMTIEEINSDREKLIKGITEGVDVELHKVGLHLINANITDIQD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECEEEEECCCCCCCC ASGYINALGKEAAARAINDATIKVAEETRRGEIGKAEAEKDQTIQVANARAIAIEGQNEA CHHHHHHHHHHHHHHHHCCHHEEEEHHHCCCCCCCCCCCCCCEEEEECCEEEEEECCCCC QIKIAESAAKLQVKQAEAKKLAEVAQKVQEAKTLEEAYQAEKEAELKRAERERATQEANI EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE LVTARIEKSQREVQAQATAEVLKLEQEGKAQALLIQRRAEAEAIRQLAEGEAQATLLKKK EEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AEGEGMEMVGRGEAAAIEAVLEGKARGFQQIVQAAGSSEAASNLLVTEQLTKIVELQSGA CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC IKGLKFDKVVVMGNGGNSSVGGFVQNLVKDTLPLHELGKSVGLELPAFLGKPMEGKTAAS CCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCCCCCCC SPAPAADAPAADTATAVNPS CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDKIIPIAILVLFIILTASWLFSRYRMCPPDKILIVFGKVGTGQPAKCYHGGSTFVLPVL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEECCCEEHHHHH QSYSYLDLNPINIDVPLQGALSSQNIRVDVPSSFIVGISTLPEIMQNAAARLLGRSREEI HCCCCCCCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH RNLAAEIIMGQMRVVIASMTIEEINSDREKLIKGITEGVDVELHKVGLHLINANITDIQD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECEEEEECCCCCCCC ASGYINALGKEAAARAINDATIKVAEETRRGEIGKAEAEKDQTIQVANARAIAIEGQNEA CHHHHHHHHHHHHHHHHCCHHEEEEHHHCCCCCCCCCCCCCCEEEEECCEEEEEECCCCC QIKIAESAAKLQVKQAEAKKLAEVAQKVQEAKTLEEAYQAEKEAELKRAERERATQEANI EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE LVTARIEKSQREVQAQATAEVLKLEQEGKAQALLIQRRAEAEAIRQLAEGEAQATLLKKK EEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AEGEGMEMVGRGEAAAIEAVLEGKARGFQQIVQAAGSSEAASNLLVTEQLTKIVELQSGA CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC IKGLKFDKVVVMGNGGNSSVGGFVQNLVKDTLPLHELGKSVGLELPAFLGKPMEGKTAAS CCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCCCCCCC SPAPAADAPAADTATAVNPS CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]