Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735078

Identifier: 187735078

GI number: 187735078

Start: 670155

End: 670484

Strand: Reverse

Name: 187735078

Synonym: Amuc_0572

Alternate gene names: NA

Gene position: 670484-670155 (Counterclockwise)

Preceding gene: 187735086

Following gene: 187735076

Centisome position: 25.17

GC content: 53.94

Gene sequence:

>330_bases
ATGGACGAGGAAGCCACAGCAACCGGACGCAACCACGGAGAACAGCCTTTGGATGAACTGATGAAGCGCTGGCATCTGAC
CAATCACGACCTGGTGGAAATTTCTCCGGAGCAGCTTACCCACAAGCAGGTCCAAAAAGCCCGGCAGGGGCGCCAGCTTA
CCCTGAAAATGATGCAGAAGGTATGCCGTGCCTTGAATGTAGCCATCTGGGAACGGCTCACCCCCATGCAGAAAGAGCAG
TACTTCGAATACATGCACAAGCATGTGTTCAGCTATGCCAAGGGATATGATCCGGCCTGGAAAGACCCGAACATGGACAT
GATGGCCTGA

Upstream 100 bases:

>100_bases
CCATGTATCCGGACGCCGGGCAACTGGAAATGCAAAAAAAGTGCTGATGGGGCAATCATGTATTGCCTATTTCCCGGAAA
TAGGGCACGAAGGAAGGCGT

Downstream 100 bases:

>100_bases
CCCCGGATTCCGTTACCGGGCGGATTTTGCCTGCTGCCAGCGTGCCTCCATGGCCTCCGCAGAAGCTTCTTCCAGGGAAA
GACCGTCTTTGGCAAGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MDEEATATGRNHGEQPLDELMKRWHLTNHDLVEISPEQLTHKQVQKARQGRQLTLKMMQKVCRALNVAIWERLTPMQKEQ
YFEYMHKHVFSYAKGYDPAWKDPNMDMMA

Sequences:

>Translated_109_residues
MDEEATATGRNHGEQPLDELMKRWHLTNHDLVEISPEQLTHKQVQKARQGRQLTLKMMQKVCRALNVAIWERLTPMQKEQ
YFEYMHKHVFSYAKGYDPAWKDPNMDMMA
>Mature_109_residues
MDEEATATGRNHGEQPLDELMKRWHLTNHDLVEISPEQLTHKQVQKARQGRQLTLKMMQKVCRALNVAIWERLTPMQKEQ
YFEYMHKHVFSYAKGYDPAWKDPNMDMMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12987; Mature: 12987

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
8.3 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEEATATGRNHGEQPLDELMKRWHLTNHDLVEISPEQLTHKQVQKARQGRQLTLKMMQK
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHCCHHHHHHHHHH
VCRALNVAIWERLTPMQKEQYFEYMHKHVFSYAKGYDPAWKDPNMDMMA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDEEATATGRNHGEQPLDELMKRWHLTNHDLVEISPEQLTHKQVQKARQGRQLTLKMMQK
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHCCHHHHHHHHHH
VCRALNVAIWERLTPMQKEQYFEYMHKHVFSYAKGYDPAWKDPNMDMMA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA