| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735074
Identifier: 187735074
GI number: 187735074
Start: 667693
End: 668124
Strand: Reverse
Name: 187735074
Synonym: Amuc_0568
Alternate gene names: NA
Gene position: 668124-667693 (Counterclockwise)
Preceding gene: 187735075
Following gene: 187735072
Centisome position: 25.08
GC content: 53.24
Gene sequence:
>432_bases ATGGCAGGCATGAATCCGGAGCTGATGTTTCATACGGAAGATGAAGTCATGTTTTATGATACGGACTGCGGCGGGGTGGT TCATAACCTGGCCTATTTGCGCATGATTGAGACCTGCCGTACCAAACTTGGAGCTAAATTGGGAATGGATTACAAAACCA TGAGCGATTTGCAGCAGTTTGCCGTAGTGGTGCGCCATGAGATTGACTATGTGCGTCCGGCCGTTCTGGGAGACACCATT TTGACGACGGGATGGCTTCAATCCGTGGACCGGGCCCGCTTCTGGTGCGATTTTGAAATGAGGCGCGCTTCCAATAATGA TCTTCTGGTCAGGGCTCATCAGCAGCTAGCCCTGGTCCAGATGCCGCAGGGGCGTCCTGTGCGTATTCCTGCCGAATGGC GTGCGAGATGGCTGGAATGCATGGAATCCTGA
Upstream 100 bases:
>100_bases CGGGGCTGCTTCCGTCTGCGTGCTGACGCTGGCGCGGACGCATCATGCATGGCGCGGCTGAACCGGAATTTTCTTTCAGC CCGCCTGTTTCCTTTTTACA
Downstream 100 bases:
>100_bases TCTTTTTTTGTCCATCTTCCATTTTACGCTTGCCATGAAAGGGGGTGTGGTGTTTACTGCTTGCGCCCTTCCAGCAAGGG TAAGTGCTTGGGTAGCTCAG
Product: thioesterase
Products: NA
Alternate protein names: Thioesterase Superfamily; L-Pal System-Associated Acyl-CoA Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MAGMNPELMFHTEDEVMFYDTDCGGVVHNLAYLRMIETCRTKLGAKLGMDYKTMSDLQQFAVVVRHEIDYVRPAVLGDTI LTTGWLQSVDRARFWCDFEMRRASNNDLLVRAHQQLALVQMPQGRPVRIPAEWRARWLECMES
Sequences:
>Translated_143_residues MAGMNPELMFHTEDEVMFYDTDCGGVVHNLAYLRMIETCRTKLGAKLGMDYKTMSDLQQFAVVVRHEIDYVRPAVLGDTI LTTGWLQSVDRARFWCDFEMRRASNNDLLVRAHQQLALVQMPQGRPVRIPAEWRARWLECMES >Mature_142_residues AGMNPELMFHTEDEVMFYDTDCGGVVHNLAYLRMIETCRTKLGAKLGMDYKTMSDLQQFAVVVRHEIDYVRPAVLGDTIL TTGWLQSVDRARFWCDFEMRRASNNDLLVRAHQQLALVQMPQGRPVRIPAEWRARWLECMES
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16613; Mature: 16482
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGMNPELMFHTEDEVMFYDTDCGGVVHNLAYLRMIETCRTKLGAKLGMDYKTMSDLQQF CCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AVVVRHEIDYVRPAVLGDTILTTGWLQSVDRARFWCDFEMRRASNNDLLVRAHQQLALVQ HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECHHHHCCCCCCEEEEECHHHHEEE MPQGRPVRIPAEWRARWLECMES CCCCCEEECCHHHHHHHHHHHCC >Mature Secondary Structure AGMNPELMFHTEDEVMFYDTDCGGVVHNLAYLRMIETCRTKLGAKLGMDYKTMSDLQQF CCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AVVVRHEIDYVRPAVLGDTILTTGWLQSVDRARFWCDFEMRRASNNDLLVRAHQQLALVQ HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECHHHHCCCCCCEEEEECHHHHEEE MPQGRPVRIPAEWRARWLECMES CCCCCEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA