Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735074

Identifier: 187735074

GI number: 187735074

Start: 667693

End: 668124

Strand: Reverse

Name: 187735074

Synonym: Amuc_0568

Alternate gene names: NA

Gene position: 668124-667693 (Counterclockwise)

Preceding gene: 187735075

Following gene: 187735072

Centisome position: 25.08

GC content: 53.24

Gene sequence:

>432_bases
ATGGCAGGCATGAATCCGGAGCTGATGTTTCATACGGAAGATGAAGTCATGTTTTATGATACGGACTGCGGCGGGGTGGT
TCATAACCTGGCCTATTTGCGCATGATTGAGACCTGCCGTACCAAACTTGGAGCTAAATTGGGAATGGATTACAAAACCA
TGAGCGATTTGCAGCAGTTTGCCGTAGTGGTGCGCCATGAGATTGACTATGTGCGTCCGGCCGTTCTGGGAGACACCATT
TTGACGACGGGATGGCTTCAATCCGTGGACCGGGCCCGCTTCTGGTGCGATTTTGAAATGAGGCGCGCTTCCAATAATGA
TCTTCTGGTCAGGGCTCATCAGCAGCTAGCCCTGGTCCAGATGCCGCAGGGGCGTCCTGTGCGTATTCCTGCCGAATGGC
GTGCGAGATGGCTGGAATGCATGGAATCCTGA

Upstream 100 bases:

>100_bases
CGGGGCTGCTTCCGTCTGCGTGCTGACGCTGGCGCGGACGCATCATGCATGGCGCGGCTGAACCGGAATTTTCTTTCAGC
CCGCCTGTTTCCTTTTTACA

Downstream 100 bases:

>100_bases
TCTTTTTTTGTCCATCTTCCATTTTACGCTTGCCATGAAAGGGGGTGTGGTGTTTACTGCTTGCGCCCTTCCAGCAAGGG
TAAGTGCTTGGGTAGCTCAG

Product: thioesterase

Products: NA

Alternate protein names: Thioesterase Superfamily; L-Pal System-Associated Acyl-CoA Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MAGMNPELMFHTEDEVMFYDTDCGGVVHNLAYLRMIETCRTKLGAKLGMDYKTMSDLQQFAVVVRHEIDYVRPAVLGDTI
LTTGWLQSVDRARFWCDFEMRRASNNDLLVRAHQQLALVQMPQGRPVRIPAEWRARWLECMES

Sequences:

>Translated_143_residues
MAGMNPELMFHTEDEVMFYDTDCGGVVHNLAYLRMIETCRTKLGAKLGMDYKTMSDLQQFAVVVRHEIDYVRPAVLGDTI
LTTGWLQSVDRARFWCDFEMRRASNNDLLVRAHQQLALVQMPQGRPVRIPAEWRARWLECMES
>Mature_142_residues
AGMNPELMFHTEDEVMFYDTDCGGVVHNLAYLRMIETCRTKLGAKLGMDYKTMSDLQQFAVVVRHEIDYVRPAVLGDTIL
TTGWLQSVDRARFWCDFEMRRASNNDLLVRAHQQLALVQMPQGRPVRIPAEWRARWLECMES

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16613; Mature: 16482

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGMNPELMFHTEDEVMFYDTDCGGVVHNLAYLRMIETCRTKLGAKLGMDYKTMSDLQQF
CCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AVVVRHEIDYVRPAVLGDTILTTGWLQSVDRARFWCDFEMRRASNNDLLVRAHQQLALVQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECHHHHCCCCCCEEEEECHHHHEEE
MPQGRPVRIPAEWRARWLECMES
CCCCCEEECCHHHHHHHHHHHCC
>Mature Secondary Structure 
AGMNPELMFHTEDEVMFYDTDCGGVVHNLAYLRMIETCRTKLGAKLGMDYKTMSDLQQF
CCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AVVVRHEIDYVRPAVLGDTILTTGWLQSVDRARFWCDFEMRRASNNDLLVRAHQQLALVQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECHHHHCCCCCCEEEEECHHHHEEE
MPQGRPVRIPAEWRARWLECMES
CCCCCEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA