| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735052
Identifier: 187735052
GI number: 187735052
Start: 646473
End: 647093
Strand: Reverse
Name: 187735052
Synonym: Amuc_0545
Alternate gene names: NA
Gene position: 647093-646473 (Counterclockwise)
Preceding gene: 187735053
Following gene: 187735051
Centisome position: 24.29
GC content: 50.72
Gene sequence:
>621_bases ATGTTCTGGTGGGGATATGCAGTTTTGGCCGGAACAATACTCCTTTCTTGGCCCGGTGCTGAATCCGTTTTTCCCTTTTG TGGGACCGCAGGTGGCAGGCGGATAGCCGTGAATTCTGTCCGGGAACGAAACTTCAGGAGAAGTGTTGCCGTCTTTTTCC AGTATTGCATTCCGTGTGTGGCTGGGAGGAGGAGAGGCAGTCAGGAGAGTATTGGAAGGGCCGGCTTCAGAAAACCTGTT CATTCACGGGAGGGATGGAAAGAGTATATTGAAAGGAGGATGCAGCAGAGCAGGGAGAAAGGCGGCTCGAAGCCTTTATC TTATTTGTACAGTAACAGGAAAATCCTTGTTGATGATTCCCGGGAAGTGATATTGTTATGGGGGAGTACGGGGAGGAGTG TGTTTCTTCCCGTACCTCCCGTGGGGAGGAATAGCTGTTTTTTCATGATATTTCCTTTCAACTCGCGGATGGGATTTCAT GTTGAAAAAAGAGAACTGAGAGGGGAGGGGATGGATGTTGCCGGGGAGAAGGCCGGCATGGCTGCGGATGCCGGAAAAAT GGAATTCCGGTTGAACGGACGATCTGTTTGCGCCATGTTAAATGTGCCTCTGGCATCCTGA
Upstream 100 bases:
>100_bases GGGAGAAACGGAGGCCCGCATACGGCAGCATTTTACGGCAAGGGGGGGAGCCCCGTAGAGAAATCCGGAGTCGGACCATG CCCTTTTTGTTGTACGGTAA
Downstream 100 bases:
>100_bases CAGACGGGATCCGAGGCTCCTTAAGGGTATGATGGAATAGTAGGCCGTGTTCCACCGAAAAACTTTTGAAAGCGGAAAGA GTGCATTCCTTTGGCCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MFWWGYAVLAGTILLSWPGAESVFPFCGTAGGRRIAVNSVRERNFRRSVAVFFQYCIPCVAGRRRGSQESIGRAGFRKPV HSREGWKEYIERRMQQSREKGGSKPLSYLYSNRKILVDDSREVILLWGSTGRSVFLPVPPVGRNSCFFMIFPFNSRMGFH VEKRELRGEGMDVAGEKAGMAADAGKMEFRLNGRSVCAMLNVPLAS
Sequences:
>Translated_206_residues MFWWGYAVLAGTILLSWPGAESVFPFCGTAGGRRIAVNSVRERNFRRSVAVFFQYCIPCVAGRRRGSQESIGRAGFRKPV HSREGWKEYIERRMQQSREKGGSKPLSYLYSNRKILVDDSREVILLWGSTGRSVFLPVPPVGRNSCFFMIFPFNSRMGFH VEKRELRGEGMDVAGEKAGMAADAGKMEFRLNGRSVCAMLNVPLAS >Mature_206_residues MFWWGYAVLAGTILLSWPGAESVFPFCGTAGGRRIAVNSVRERNFRRSVAVFFQYCIPCVAGRRRGSQESIGRAGFRKPV HSREGWKEYIERRMQQSREKGGSKPLSYLYSNRKILVDDSREVILLWGSTGRSVFLPVPPVGRNSCFFMIFPFNSRMGFH VEKRELRGEGMDVAGEKAGMAADAGKMEFRLNGRSVCAMLNVPLAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23171; Mature: 23171
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFWWGYAVLAGTILLSWPGAESVFPFCGTAGGRRIAVNSVRERNFRRSVAVFFQYCIPCV CCEEHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH AGRRRGSQESIGRAGFRKPVHSREGWKEYIERRMQQSREKGGSKPLSYLYSNRKILVDDS HHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEECC REVILLWGSTGRSVFLPVPPVGRNSCFFMIFPFNSRMGFHVEKRELRGEGMDVAGEKAGM CEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEHHHHCCCCCCCCCCCCCC AADAGKMEFRLNGRSVCAMLNVPLAS CCCCCCEEEEECCCEEEEEECCCCCC >Mature Secondary Structure MFWWGYAVLAGTILLSWPGAESVFPFCGTAGGRRIAVNSVRERNFRRSVAVFFQYCIPCV CCEEHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH AGRRRGSQESIGRAGFRKPVHSREGWKEYIERRMQQSREKGGSKPLSYLYSNRKILVDDS HHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEECC REVILLWGSTGRSVFLPVPPVGRNSCFFMIFPFNSRMGFHVEKRELRGEGMDVAGEKAGM CEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEHHHHCCCCCCCCCCCCCC AADAGKMEFRLNGRSVCAMLNVPLAS CCCCCCEEEEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA