| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735033
Identifier: 187735033
GI number: 187735033
Start: 618416
End: 618880
Strand: Direct
Name: 187735033
Synonym: Amuc_0526
Alternate gene names: NA
Gene position: 618416-618880 (Clockwise)
Preceding gene: 187735032
Following gene: 187735034
Centisome position: 23.21
GC content: 57.2
Gene sequence:
>465_bases ATGGACACCATTGATTCCATTACCATTATTGCAGCGGCATGGGGCCTGCTGGTTCTCCGGCTGACGCTGGCTTTTATCCT GTGGCCACACGGGACCCAGAAAGTGCTGGGCTGGTTCGGGGGCGCGGGCTGGGAGGGCACCTACCGGGCCTTCACGGAAA AAATGGGCATTCCCCCCTTTCTGGCCAAGGTGGCCATGCTGACGGAATTTTTCGCCCCTATCTGCCTGATACTGGGCGTA TTCACCAGAATAGCGGCTCTCAGCGTTATCATCCTCATGGCCGTAGCCATAACCAAACACGTCAAAAACGGCTACTTTTC CAACTGGTCCGGCAAAAAAGCCGGGGAAGGCGTAGAATTCCACCTGCTTTATGCGGGCTCCGCTTTCGCCCTGTTCCTGA CAGGCCCCGGCCCTTGGTCCGTGGACGCCTGGTGCATGAACATCGTGCATGTCATCTTCGGTTGA
Upstream 100 bases:
>100_bases CCGGAAGGGGAGGCAATGACCTCCTTTTCCGGCCTTTTCCGTACCCGGAAATGAACGCCCCATGAAATAGAAGGGTCTTT TCTTCAATCACTTCAAATTC
Downstream 100 bases:
>100_bases CGGCGGCAGACAGCACACGGAAGGGCATAGAACATACTTTCCGATTCTCAAACCCGCCGTATTCTGGTATTTATGGAAAG GCTTTCTTTTGCCTCGTTAA
Product: DoxX family protein
Products: NA
Alternate protein names: Membrane DoxD-Like Family Protein; DoxX-Like; DoxX Subfamily; Doxx Family Protein; DoxD-Like Family Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MDTIDSITIIAAAWGLLVLRLTLAFILWPHGTQKVLGWFGGAGWEGTYRAFTEKMGIPPFLAKVAMLTEFFAPICLILGV FTRIAALSVIILMAVAITKHVKNGYFSNWSGKKAGEGVEFHLLYAGSAFALFLTGPGPWSVDAWCMNIVHVIFG
Sequences:
>Translated_154_residues MDTIDSITIIAAAWGLLVLRLTLAFILWPHGTQKVLGWFGGAGWEGTYRAFTEKMGIPPFLAKVAMLTEFFAPICLILGV FTRIAALSVIILMAVAITKHVKNGYFSNWSGKKAGEGVEFHLLYAGSAFALFLTGPGPWSVDAWCMNIVHVIFG >Mature_154_residues MDTIDSITIIAAAWGLLVLRLTLAFILWPHGTQKVLGWFGGAGWEGTYRAFTEKMGIPPFLAKVAMLTEFFAPICLILGV FTRIAALSVIILMAVAITKHVKNGYFSNWSGKKAGEGVEFHLLYAGSAFALFLTGPGPWSVDAWCMNIVHVIFG
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16779; Mature: 16779
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTIDSITIIAAAWGLLVLRLTLAFILWPHGTQKVLGWFGGAGWEGTYRAFTEKMGIPPF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHH LAKVAMLTEFFAPICLILGVFTRIAALSVIILMAVAITKHVKNGYFSNWSGKKAGEGVEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE HLLYAGSAFALFLTGPGPWSVDAWCMNIVHVIFG EEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MDTIDSITIIAAAWGLLVLRLTLAFILWPHGTQKVLGWFGGAGWEGTYRAFTEKMGIPPF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHH LAKVAMLTEFFAPICLILGVFTRIAALSVIILMAVAITKHVKNGYFSNWSGKKAGEGVEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE HLLYAGSAFALFLTGPGPWSVDAWCMNIVHVIFG EEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA