Click here to switch to the map view.

The map label for this gene is atpF

Identifier: 187735017

GI number: 187735017

Start: 599607

End: 600134

Strand: Reverse

Name: atpF

Synonym: Amuc_0510

Alternate gene names: 187735017

Gene position: 600134-599607 (Counterclockwise)

Preceding gene: 187735018

Following gene: 187735016

Centisome position: 22.53

GC content: 53.41

Gene sequence:

>528_bases
ATGCTGAATCTCATAGCTGACCAAGCCTGGAATCCTTTTGCTCCCTTTGGGGTAACGAGTTGGGAACCTTTTGTTGCCAA
CCTGATCGCTTTCATTCTGATGGTGGTGATCCTGCGTTATCTGGCGTTCAAACCCATCCAGAATGTTCTGGAAAAAAGGC
GCCAGCGTATTGAAGAAGGAGAGGAAATGCGTGAGGAAAGTGAGCGGCAGCTGGCTTCCGTAAAGGAACAGACGCATGAA
ATGCTGGTGGAAGCAGGGGAAAAGGGACAGGAGAAAATAGACGCCGCCAAGGCTGCCGCCGCCCGCCTGTTGGAAGAACA
GGAAGCGGAAGCCTCCCGGAAGGCTGAGGAAATCATAAAAAAGGCCCGCCAGCTTGCGGAACTGGAACAGCAGAAAGAGC
GTGAAGCGTTAAAAGAACAATTTGGCCAGCTGGTGGCCCTGGCGGCGGCCCAGGTTACCGGAAAAATGCTGACGGAAGAA
GACCAGCGGAGAATCAACCGGGAAGCGATCGACAGCCTAGATTCCTGA

Upstream 100 bases:

>100_bases
CGGAAGTTTCGCCCCCGGAGGGAGCTTCTCCGCTCCGGGGCGGTGCGCCCGTTCCCTGCCGGTTTCGGAAAATTTCCGGC
ATGTTCAAACCGCTCATCTT

Downstream 100 bases:

>100_bases
AATATTTATGAAGATCGGAAAGGACACGCAAAATGCCGCCCGCAGGCTGTTCCGGCTCTGTATGGACGGGAATGCCGTGG
CGGAGGACCGCGTGCGTCTG

Product: H+transporting two-sector ATPase B/B' subunit

Products: ATP; H+; H2O [C]

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLNLIADQAWNPFAPFGVTSWEPFVANLIAFILMVVILRYLAFKPIQNVLEKRRQRIEEGEEMREESERQLASVKEQTHE
MLVEAGEKGQEKIDAAKAAAARLLEEQEAEASRKAEEIIKKARQLAELEQQKEREALKEQFGQLVALAAAQVTGKMLTEE
DQRRINREAIDSLDS

Sequences:

>Translated_175_residues
MLNLIADQAWNPFAPFGVTSWEPFVANLIAFILMVVILRYLAFKPIQNVLEKRRQRIEEGEEMREESERQLASVKEQTHE
MLVEAGEKGQEKIDAAKAAAARLLEEQEAEASRKAEEIIKKARQLAELEQQKEREALKEQFGQLVALAAAQVTGKMLTEE
DQRRINREAIDSLDS
>Mature_175_residues
MLNLIADQAWNPFAPFGVTSWEPFVANLIAFILMVVILRYLAFKPIQNVLEKRRQRIEEGEEMREESERQLASVKEQTHE
MLVEAGEKGQEKIDAAKAAAARLLEEQEAEASRKAEEIIKKARQLAELEQQKEREALKEQFGQLVALAAAQVTGKMLTEE
DQRRINREAIDSLDS

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_AKKM8 (B2UNX8)

Other databases:

- EMBL:   CP001071
- RefSeq:   YP_001877129.1
- GeneID:   6273757
- GenomeReviews:   CP001071_GR
- KEGG:   amu:Amuc_0510
- OMA:   KEQTHEM
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14 [C]

Molecular weight: Translated: 19962; Mature: 19962

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1b7f2fc0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLIADQAWNPFAPFGVTSWEPFVANLIAFILMVVILRYLAFKPIQNVLEKRRQRIEEG
CCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEMREESERQLASVKEQTHEMLVEAGEKGQEKIDAAKAAAARLLEEQEAEASRKAEEIIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KARQLAELEQQKEREALKEQFGQLVALAAAQVTGKMLTEEDQRRINREAIDSLDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MLNLIADQAWNPFAPFGVTSWEPFVANLIAFILMVVILRYLAFKPIQNVLEKRRQRIEEG
CCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEMREESERQLASVKEQTHEMLVEAGEKGQEKIDAAKAAAARLLEEQEAEASRKAEEIIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KARQLAELEQQKEREALKEQFGQLVALAAAQVTGKMLTEEDQRRINREAIDSLDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP; H+; Phosphate [C]

Specific reaction: ADP + (4) H+ + Phosphate <==> ATP + (3) H+ + H2O [C]

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA