| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735002
Identifier: 187735002
GI number: 187735002
Start: 585836
End: 586966
Strand: Direct
Name: 187735002
Synonym: Amuc_0495
Alternate gene names: NA
Gene position: 585836-586966 (Clockwise)
Preceding gene: 187735001
Following gene: 187735010
Centisome position: 21.99
GC content: 55.53
Gene sequence:
>1131_bases ATGCAACTTTTCTTCAGGACCGGGGTTTGTAAAGATACCTTGCAATCTCATACCACCATGATACGCCTCACCCCGCTCCG CAAACGTCCGGCGCTTTCCGCGCTGGTGCTTCTCCTCCTGGGATCCGGCTTCTGCCAGGCTCAGGAAATGCTTACCGATT CCGCAAGAAAGGAAGCTTCCGAATGGCTTAAGGAAGTCAAAGCCGGCTACCTGAACACCAGCTCTTCCCGTATCCAGAAG GCCGTGGCCGCCCTTACCGCGGCCATCAGCACGGAAAACGCCGCCATGAAACTTTACGTGGATGCCATGAAGGACCGGTT TCTGAACCCCACCAGCATGATGTCCCGCATGCTGAACCGGGGAGGCGGGGGCGGCTTCCGCATGATGCGCATGCCGGGTT CCGGAGGGAGGGGAGGCAACAGCAGCAAGCCTGACAGCCCCAGCACCGCCTTTTCCAACTGGCGCAAGCAGAATACGGGA AACAACGTAGCTCCCGGCTTTAAAAAAGCCCTTCAAATCCAGTGCAAATGGATGCTGCTTTGCCTGAGAAAAGCGGACGC GGAAAAAAACGAACGCGACCTTAACGTTTCCTCCAGCGTCCTGTCCATGCTGGATGAAGTGGCCGCCAACGCCAAGGATG TAGGCGAACAGCTTCCCATGGTAAGCGGAGCCAGCGAAGTCATCCGCACCTACCTGAACATTGGAGACTACCGTTCGGAA ACCCTGCCGGACAACCTGATGGATCTCAATACCATCTTCGACCGCGTACTGCTGGCTCCCTACAAGGAGAAAAAGGATGT GGAAAACTTCCGGAAACTCTGGAACAAACGCATCGGCCTGGAAGCGACTCTGCTGCAAAACAACTCCGCCAGCGATAAAA AAACAGCGGAAGCAGAAAAAGCCGATTTCCTGGTTAAAAGACAGTGGGAACGGGAAAAGGCCTGCTTTGAACTCGGCGAC CAGGTAGCGGCACTTGAAAAGATGAAAAGCCTGATTTCCGGCATCAAGGACCCTTCTGAAAAGCAGCGTGCCATCCGCGA CCTGGAATTCCTGCTTCTTACCCCGGCGGAACAGGCGAAACTCCGCGAAGAGCGCATGAACAAACGCATGCCGGGCGGTC CTCGCTTTTAA
Upstream 100 bases:
>100_bases GCTTGAGAATACAAAAAAAGGAATAATGTACGGCGAATGGAATGATAATGGGCGATTATTAGACTATTAGCTCCGGCAAC CACGTTTTTTAAGACAAAAG
Downstream 100 bases:
>100_bases CAATCGTCGCCAAGCCCCAGCCTCCCTCCTTTCTCATCCCCCGTTGCGTAACGCGCACCGGGGGATTTTACATTGCGGAG AGCCGCATTTCCCTGACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MQLFFRTGVCKDTLQSHTTMIRLTPLRKRPALSALVLLLLGSGFCQAQEMLTDSARKEASEWLKEVKAGYLNTSSSRIQK AVAALTAAISTENAAMKLYVDAMKDRFLNPTSMMSRMLNRGGGGGFRMMRMPGSGGRGGNSSKPDSPSTAFSNWRKQNTG NNVAPGFKKALQIQCKWMLLCLRKADAEKNERDLNVSSSVLSMLDEVAANAKDVGEQLPMVSGASEVIRTYLNIGDYRSE TLPDNLMDLNTIFDRVLLAPYKEKKDVENFRKLWNKRIGLEATLLQNNSASDKKTAEAEKADFLVKRQWEREKACFELGD QVAALEKMKSLISGIKDPSEKQRAIRDLEFLLLTPAEQAKLREERMNKRMPGGPRF
Sequences:
>Translated_376_residues MQLFFRTGVCKDTLQSHTTMIRLTPLRKRPALSALVLLLLGSGFCQAQEMLTDSARKEASEWLKEVKAGYLNTSSSRIQK AVAALTAAISTENAAMKLYVDAMKDRFLNPTSMMSRMLNRGGGGGFRMMRMPGSGGRGGNSSKPDSPSTAFSNWRKQNTG NNVAPGFKKALQIQCKWMLLCLRKADAEKNERDLNVSSSVLSMLDEVAANAKDVGEQLPMVSGASEVIRTYLNIGDYRSE TLPDNLMDLNTIFDRVLLAPYKEKKDVENFRKLWNKRIGLEATLLQNNSASDKKTAEAEKADFLVKRQWEREKACFELGD QVAALEKMKSLISGIKDPSEKQRAIRDLEFLLLTPAEQAKLREERMNKRMPGGPRF >Mature_376_residues MQLFFRTGVCKDTLQSHTTMIRLTPLRKRPALSALVLLLLGSGFCQAQEMLTDSARKEASEWLKEVKAGYLNTSSSRIQK AVAALTAAISTENAAMKLYVDAMKDRFLNPTSMMSRMLNRGGGGGFRMMRMPGSGGRGGNSSKPDSPSTAFSNWRKQNTG NNVAPGFKKALQIQCKWMLLCLRKADAEKNERDLNVSSSVLSMLDEVAANAKDVGEQLPMVSGASEVIRTYLNIGDYRSE TLPDNLMDLNTIFDRVLLAPYKEKKDVENFRKLWNKRIGLEATLLQNNSASDKKTAEAEKADFLVKRQWEREKACFELGD QVAALEKMKSLISGIKDPSEKQRAIRDLEFLLLTPAEQAKLREERMNKRMPGGPRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42030; Mature: 42030
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLFFRTGVCKDTLQSHTTMIRLTPLRKRPALSALVLLLLGSGFCQAQEMLTDSARKEAS CCCCEECCCHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH EWLKEVKAGYLNTSSSRIQKAVAALTAAISTENAAMKLYVDAMKDRFLNPTSMMSRMLNR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHC GGGGGFRMMRMPGSGGRGGNSSKPDSPSTAFSNWRKQNTGNNVAPGFKKALQIQCKWMLL CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH CLRKADAEKNERDLNVSSSVLSMLDEVAANAKDVGEQLPMVSGASEVIRTYLNIGDYRSE HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC TLPDNLMDLNTIFDRVLLAPYKEKKDVENFRKLWNKRIGLEATLLQNNSASDKKTAEAEK CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH ADFLVKRQWEREKACFELGDQVAALEKMKSLISGIKDPSEKQRAIRDLEFLLLTPAEQAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHH LREERMNKRMPGGPRF HHHHHHHCCCCCCCCC >Mature Secondary Structure MQLFFRTGVCKDTLQSHTTMIRLTPLRKRPALSALVLLLLGSGFCQAQEMLTDSARKEAS CCCCEECCCHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH EWLKEVKAGYLNTSSSRIQKAVAALTAAISTENAAMKLYVDAMKDRFLNPTSMMSRMLNR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHC GGGGGFRMMRMPGSGGRGGNSSKPDSPSTAFSNWRKQNTGNNVAPGFKKALQIQCKWMLL CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH CLRKADAEKNERDLNVSSSVLSMLDEVAANAKDVGEQLPMVSGASEVIRTYLNIGDYRSE HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC TLPDNLMDLNTIFDRVLLAPYKEKKDVENFRKLWNKRIGLEATLLQNNSASDKKTAEAEK CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH ADFLVKRQWEREKACFELGDQVAALEKMKSLISGIKDPSEKQRAIRDLEFLLLTPAEQAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHH LREERMNKRMPGGPRF HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA